Alteration of DNA methyltransferases by eribulin elicits broad DNA methylation changes with potential therapeutic implications for triple-negative breast cancer

Eribulin's exclusive binding to microtubule plus ends results from discrimination between GTP and GDP forms of β-tubulin

The clinically approved anticancer agent eribulin (Halaven®) exerts cytotoxic antimitotic effects by binding to high affinity sites on exposed plus ends of growing microtubules (MT). Despite X-ray crystallographic mapping of eribulin's binding pocket within β-tubulin's vinca domain, the biophysical basis for eribulin's MT plus end binding exclusivity remains unknown. We performed surface plasmon resonance (SPR) studies of tubulin binding to biotinylated eribulin probes to ask if eribulin discriminates between GTP and GDP forms of β-tubulin, which characterize growing MT plus ends and MT sides, respectively. Tubulin binding to biotin-eribulin proceeded via a single state binding reaction, while binding to biotin-vinblastine occurred via a two-state reaction incorporating a conformational change. Biochemical approaches confirmed tubulin conformational changes induced by vinblastine but not eribulin. SPR competition studies using free eribulin and vinblastine confirmed tubulin binding specificity to cognate biotinylated probes, showing that eribulin binding within the β-tubulin vinca domain is physically and functionally distinct from vinblastine. SPR studies using tubulin containing only GTP or GDP forms of β-tubulin showed that while biotin-eribulin has only slightly higher overall affinity for GTP-tubulin, dissociation from GTP-tubulin was ∼7-fold slower than from GDP-tubulin, establishing that eribulin discriminates between GTP and GDP forms of β-tubulin. In contrast, vinblastine fails to discriminate between these two tubulin forms, consistent with its known binding to both MT ends and sides. Overall, our results establish, for the first time, the biophysical basis for eribulin's MT plus end binding exclusivity as resulting from the ability to discriminate between GTP and GDP forms of β-tubulin.

Immunomodulatory Effects of Halichondrin Isolated from Marine Sponges and Its Synthetic Analogs in Oncological Applications

Marine natural products comprise unique chemical structures and vast varieties of biological activities. This review aims to summarize halichondrin, a marine natural product, and its synthetic analogs along with its therapeutic properties and mechanisms. Halichondrin and its analogs, derived from marine sponges, exhibit potent antineoplastic properties, making them promising candidates for cancer therapeutics. These compounds, characterized by their complex molecular structures, have demonstrated significant efficacy in inhibiting microtubule dynamics, leading to cell cycle arrest and apoptosis in various cancer cell lines. Several types of halichondrins such as halichondrins B, C, norhalichondrin B, and homohalichondrin B have been discovered with similar anticancer and antitumor characteristics. Since naturally available halichondrins show hurdles in synthesis, recent advancements in synthetic methodologies have enabled the development of several halichondrin analogs, such as E7389 (eribulin), which have shown improved therapeutic indices. Eribulin has shown excellent immunomodulatory properties by several mechanisms such as reprogramming tumor microenvironments, facilitating the infiltration and activation of immune cells, and inhibiting microtubule dynamics. Despite promising results, challenges remain in the synthesis and clinical application of these compounds. This review explores the mechanisms underlying the immunomodulatory activity of halichondrin and its analogs in cancer therapy, along with their clinical applications and potential for future drug development.