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Takeda R, Kobayashi I, Suzuki R, Kawai K, Kittaka A, Takimoto-Kamimura M, Kurita N. Proposal of potent inhibitors for vitamin-D receptor based on ab initio fragment molecular orbital calculations. J Mol Graph Model 2018; 80:320-326. [DOI: 10.1016/j.jmgm.2018.01.014] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2017] [Revised: 01/16/2018] [Accepted: 01/17/2018] [Indexed: 12/31/2022]
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Takeda R, Suzuki R, Kobayashi I, Kawai K, Kittaka A, Takimoto-Kamimura M, Kurita N. Specific interactions between vitamin D receptor and ligand depending on its chirality: ab initio fragment molecular orbital calculations. CHEM-BIO INFORMATICS JOURNAL 2018. [DOI: 10.1273/cbij.18.32] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Affiliation(s)
- Ryosuke Takeda
- Department of Computer Science and Engineering, Toyohashi University of Technology,
| | - Rie Suzuki
- Department of Computer Science and Engineering, Toyohashi University of Technology,
| | - Ittetsu Kobayashi
- Department of Computer Science and Engineering, Toyohashi University of Technology,
| | | | | | | | - Noriyuki Kurita
- Department of Computer Science and Engineering, Toyohashi University of Technology,
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Specific interactions between androgen receptor and its ligand: ab initio molecular orbital calculations in water. J Mol Graph Model 2017. [DOI: 10.1016/j.jmgm.2017.06.003] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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Murakawa T, Matsushita Y, Suzuki T, Khan MTH, Kurita N. Ab initio molecular simulations for proposing potent inhibitors to butyrylcholinesterases. J Mol Graph Model 2014; 54:54-61. [DOI: 10.1016/j.jmgm.2014.09.002] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2014] [Revised: 09/03/2014] [Accepted: 09/04/2014] [Indexed: 12/01/2022]
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Okamoto A, Yano A, Nomura K, Higai S, Kurita N. Effect of D23N mutation on the dimer conformation of amyloid β-proteins: Ab initio molecular simulations in water. J Mol Graph Model 2014; 50:113-24. [DOI: 10.1016/j.jmgm.2014.03.004] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/25/2013] [Revised: 03/12/2014] [Accepted: 03/15/2014] [Indexed: 10/25/2022]
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Ab initio fragment molecular orbital studies of influenza virus hemagglutinin–sialosaccharide complexes toward chemical clarification about the virus host range determination. Glycoconj J 2008; 25:805-15. [DOI: 10.1007/s10719-008-9141-9] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2008] [Revised: 04/28/2008] [Accepted: 04/29/2008] [Indexed: 10/21/2022]
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