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Glišić D, Milićević V, Krnjaić D, Toplak I, Prodanović R, Gallardo C, Radojičić S. Genetic analysis reveals multiple intergenic region and central variable region in the African swine fever virus variants circulating in Serbia. Vet Res Commun 2023; 47:1925-1936. [PMID: 37256519 DOI: 10.1007/s11259-023-10145-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2023] [Accepted: 05/22/2023] [Indexed: 06/01/2023]
Abstract
This study provides the first comprehensive report on the molecular characteristics of African swine fever virus (ASFV) variants in Serbia between 2019 and 2022. Since its first observation in July 2019, the disease has been found in wild boar and domestic swine. The study involved the analysis of 95 ASFV-positive samples collected from 12 infected administrative districts in Serbia. Partial four genomic regions were genetically characterized, including B646L, E183L, B602L, and the intergenic region (IGR) between the I73R-I329L genes. The results of the study suggest that multiple ASFV strains belonging to genotype II are circulating in Serbia, as evidenced by the analysis of the IGR between I73R-I329L genes that showed the most differences. Furthermore, the phylogenetic analysis of the B602L gene showed three different clades within the CVR I group of ASFV strains. Regarding the IGR, 98.4% were grouped into IGR II, with only one positive sample grouped into the IGR III group. These findings provide essential insights into the molecular characteristics of ASFV variants in Serbia and contribute to the knowledge of circulating strains of ASFV in Europe. However, further research is necessary to gain a better understanding of ASFV spread and evolution.
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Affiliation(s)
- Dimitrije Glišić
- Department of Virology, Institute of Veterinary Medicine of Serbia, 11000, Belgrade, Serbia.
| | - Vesna Milićević
- Department of Virology, Institute of Veterinary Medicine of Serbia, 11000, Belgrade, Serbia
| | - Dejan Krnjaić
- Department of Microbiology and Immunology, University of Belgrade Faculty of Veterinary Medicine, 11000, Belgrade, Serbia
| | - Ivan Toplak
- Institute of Microbiology and Parasitology, Laboratory for Virology, Veterinary Faculty, 1000, Ljubljana, Slovenia
| | - Radiša Prodanović
- Department of Ruminants and Swine Diseases, University of Belgrade Faculty of Veterinary Medicine, 11000, Belgrade, Serbia
| | - Carmina Gallardo
- European Union Reference Laboratory for ASF (EURL-ASF): Centro de Investigación en Sanidad Animal (CISA-INIA, CSIC), Valdeolmos, Madrid, Spain
| | - Sonja Radojičić
- Department of Infectious Animals Diseases and Diseases of Bees, University of Belgrade Faculty of Veterinary Medicine, 11000, Belgrade, Serbia
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Milićević V, Glišić D, Sapundžić ZZ, Milovanović B, Maletić J, Jezdimirović N, Kureljušić B. Seroprevalence of Viral Enzootic Diseases in Swine Backyard Farms in Serbia. Animals (Basel) 2023; 13:3409. [PMID: 37958164 PMCID: PMC10649762 DOI: 10.3390/ani13213409] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2023] [Revised: 10/26/2023] [Accepted: 10/31/2023] [Indexed: 11/15/2023] Open
Abstract
Contrary to pig farming in developed Western countries, in a large part of the world, pigs are still traditionally kept in small backyard farms, usually for family needs. Their main characteristics are low biosecurity, swill feeding, natural breeding and uncontrolled trade. Given the high number of backyard farms in Serbia and the risk they are thought to pose to intensive pig farming, the main aim of this study was to evaluate the prevalence of major viral diseases of swine among traditionally kept pigs in small holdings with low biosecurity. For this investigation, 222 serum samples from 69 backyard holdings were randomly selected and tested for antibodies to Porcine Reproductive and Respiratory Syndrome virus (PRRSV), Aujeszky's disease virus (ADV), Porcine Parvovirus (PPV) and Swine influenza Virus (SIV) by enzyme-linked immunosorbent assay (ELISA). The herd-level seroprevalence of PRRS, Aujeszky's disease and PPV was 2.9%, 27.5% and 37.7%, respectively. Swine influenza seroconversion was not confirmed in any of the tested holdings. Despite widely distributed PPV and AD in backyard farms in Serbia, almost 50% of them are still negative for all the tested diseases. The backyard farms must be monitored, and owners must be educated as their role in eradication programs and obtaining country-free status may be crucial.
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Affiliation(s)
- Vesna Milićević
- Institute of Veterinary Medicine of Serbia, Janisa Janulisa 14, 11000 Belgrade, Serbia; (D.G.); (Z.Z.S.); (B.M.); (J.M.); (N.J.); (B.K.)
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Plut J, Hajdinjak M, Prodanov-Radulović J, Grubač S, Djurdjević B, Štukelj M. Risk Factor Impact on African Swine Fever Transmission in Different Extensive Pig Production Settings in Serbia. Viruses 2023; 15:1232. [PMID: 37376532 DOI: 10.3390/v15061232] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2023] [Revised: 05/12/2023] [Accepted: 05/22/2023] [Indexed: 06/29/2023] Open
Abstract
The first case of ASF in a domestic pig population in Serbia was confirmed in 2019 in a backyard population. Today, outbreaks in wild boar and, more importantly, in domestic pigs are still occurring, although the government measures for ASF prevention are in place. The aim of this study was to determine critical risk factors and identify the possible reasons for ASF introduction into different extensive pig farms. The study was conducted on 26 extensive pig farms with confirmed ASF outbreaks, with data collected from beginning of 2020 to the end of 2022. Collected epidemiological data were divided into 21 main categories. After identifying specific values of variables as critical for ASF transmission, we identified nine important ASF transmission indicators as those variables for which at least 2/3 of the observed farms reported values critical for ASF transmission. Among them were type of holding, distance to hunting ground, farm/yard fencing, and home slaughtering; however, the hunting activity of pig holders, swill feeding, and feeding with mowed green mass were not included. We represented the data in the form of contingency tables to study associations between pairs of variables using Fisher's exact test. All pairs of variables in the group including type of holding, farm/yard fencing, domestic pig-wild boar contact, and hunting activity were significantly related; hunting activity of pig holders, holding pigs in backyards, unfenced yards, and domestic pig-wild boar contact were observed on the same farms. Free-range pig farming led to observed domestic pig-wild boar contact on all farms. The identified critical risk factors need to be strictly addressed to prevent the further spread of ASF to extensive farms and backyards in Serbia and elsewhere.
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Affiliation(s)
- Jan Plut
- Clinic for Ruminants and Pigs, Clinic for Reproduction and Large Animals, Veterinary Faculty, University of Ljubljana, 1000 Ljubljana, Slovenia
| | - Melita Hajdinjak
- Laboratory of Applied Mathematics and Statistics, Faculty of Electrical Engineering, University of Ljubljana, 1000 Ljubljana, Slovenia
| | | | - Siniša Grubač
- Scientific Veterinary Institute Novi Sad, 21000 Novi Sad, Serbia
| | | | - Marina Štukelj
- Clinic for Ruminants and Pigs, Clinic for Reproduction and Large Animals, Veterinary Faculty, University of Ljubljana, 1000 Ljubljana, Slovenia
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Innovative Research Offers New Hope for Managing African Swine Fever Better in Resource-Limited Smallholder Farming Settings: A Timely Update. Pathogens 2023; 12:pathogens12020355. [PMID: 36839627 PMCID: PMC9963711 DOI: 10.3390/pathogens12020355] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2023] [Revised: 02/17/2023] [Accepted: 02/19/2023] [Indexed: 02/23/2023] Open
Abstract
African swine fever (ASF) in domestic pigs has, since its discovery in Africa more than a century ago, been associated with subsistence pig keeping with low levels of biosecurity. Likewise, smallholder and backyard pig farming in resource-limited settings have been notably affected during the ongoing epidemic in Eastern Europe, Asia, the Pacific, and Caribbean regions. Many challenges to managing ASF in such settings have been identified in the ongoing as well as previous epidemics. Consistent implementation of biosecurity at all nodes in the value chain remains most important for controlling and preventing ASF. Recent research from Asia, Africa, and Europe has provided science-based information that can be of value in overcoming some of the hurdles faced for implementing biosecurity in resource-limited contexts. In this narrative review we examine a selection of these studies elucidating innovative solutions such as shorter boiling times for inactivating ASF virus in swill, participatory planning of interventions for risk mitigation for ASF, better understanding of smallholder pig-keeper perceptions and constraints, modified culling, and safe alternatives for disposal of carcasses of pigs that have died of ASF. The aim of the review is to increase acceptance and implementation of science-based approaches that increase the feasibility of managing, and the possibility to prevent, ASF in resource-limited settings. This could contribute to protecting hundreds of thousands of livelihoods that depend upon pigs and enable small-scale pig production to reach its full potential for poverty alleviation and food security.
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Orrico M, Hovari M, Beltrán-Alcrudo D. A Novel Tool to Assess the Risk for African Swine Fever in Hunting Environments: The Balkan Experience. Pathogens 2022; 11:pathogens11121466. [PMID: 36558800 PMCID: PMC9787848 DOI: 10.3390/pathogens11121466] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2022] [Revised: 11/29/2022] [Accepted: 12/01/2022] [Indexed: 12/12/2022] Open
Abstract
In Europe, African swine fever (ASF) can be sustained within wild boar populations, thus representing a constant source of virus and a huge challenge in the management of the disease. Hunters are the key stakeholders for the prevention, detection and control of ASF in wild boar. Their behavior and the biosecurity standards applied in infected or at-risk hunting grounds have a huge impact on disease dynamics and management. The Food and Agriculture Organization (FAO) has developed a semi-quantitative survey-based novel tool to assess the risk of ASF in hunting grounds (namely the risks of introduction and spread into and between hunting grounds, and the risk of not detecting the infection) and how such risks could be reduced if mitigation or corrective measures were applied at low, medium and high effort. The weight of risk factors was determined through an expert knowledge elicitation (EKE). The surveys for each hunting ground were filled in by their respective managers. The tool's outputs allow users to visualize the different ASF risks of hunting grounds, whether as numerical values or color-coded maps, at sub-national, national and regional levels. These outputs can be used to guide policy makers, highlighting gaps or geographical areas to prioritize. The tool was used to assess hunting grounds in Kosovo1 (1 As per United Nations Security Council resolution 1244). Montenegro and Serbia, showing overall a high risk.
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Affiliation(s)
- Mario Orrico
- Food and Agriculture Organization of the United Nations (FAO), Regional Office for Europe and Central Asia, 1054 Budapest, Hungary
- One Health Master, Utrecht University, 3584 CS Utrecht, The Netherlands
| | - Mark Hovari
- Food and Agriculture Organization of the United Nations (FAO), Regional Office for Europe and Central Asia, 1054 Budapest, Hungary
| | - Daniel Beltrán-Alcrudo
- Food and Agriculture Organization of the United Nations (FAO), Regional Office for Europe and Central Asia, 1054 Budapest, Hungary
- Correspondence:
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Salmonella in Wild Boars (Sus Scrofa): Characterization and Epidemiology. ACTA VET-BEOGRAD 2022. [DOI: 10.2478/acve-2022-0015] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
Abstract
The large study on Salmonella spp. in the population of wild boars from twelve hunting estates in the South-West Vojvodina, Serbia was conducted with the aim to investigate the prevalence of Salmonella spp. in wild boars and to trace Salmonella sources. The hunting estates had similar epidemiological characteristics, i.e. lowland regions with an intensive management system of wild boars. The prevalence of Salmonella in wild boars was determined and the examination of molecular similarities of strains isolated from wild boars and domestic animals (pigs and poultry from nearby farms) was performed. The total number of 425 wild boars (25.3% of total population), shot on official hunts, were sampled (425 feces and 425 mesenteric lymph nodes samples) and examined by standard ISO protocols. Subtyping of the isolates was performed and compared by Pulsed-field gel electrophoresis (PFGE). The Salmonella prevalence in the fecal samples was 3.1% and in the lymph nodes was 0.2%. Salmonella Enteritidis was the most dominant serotype. A high molecular similarity was found between Salmonella isolates from wild boars and domestic animals. The proximity of communities and domestic animals, as well as improper removal of animal waste were identified as important epidemiological factors which significantly affect the epidemiology of Salmonella in wild boars from lowlands.
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