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Genetic recombination as a major cause of mutagenesis in the human globin gene clusters. Clin Biochem 2009; 42:1839-50. [DOI: 10.1016/j.clinbiochem.2009.07.014] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2009] [Revised: 06/23/2009] [Accepted: 07/01/2009] [Indexed: 11/18/2022]
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Moradkhani K, Préhu C, Old J, Henderson S, Balamitsa V, Luo HY, Poon MC, Chui DHK, Wajcman H, Patrinos GP. Mutations in the paralogous human alpha-globin genes yielding identical hemoglobin variants. Ann Hematol 2009; 88:535-43. [PMID: 18923834 PMCID: PMC2690850 DOI: 10.1007/s00277-008-0624-3] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2007] [Accepted: 09/25/2008] [Indexed: 11/25/2022]
Abstract
The human alpha-globin genes are paralogues, sharing a high degree of DNA sequence similarity and producing an identical alpha-globin chain. Over half of the alpha-globin structural variants reported to date are only characterized at the amino acid level. It is likely that a fraction of these variants, with phenotypes differing from one observation to another, may be due to the same mutation but on a different alpha-globin gene. There have been very few previous examples of hemoglobin variants that can be found at both HBA1 and HBA2 genes. Here, we report the results of a systematic multicenter study in a large multiethnic population to identify such variants and to analyze their differences from a functional and evolutionary perspective. We identified 14 different Hb variants resulting from identical mutations on either one of the two human alpha-globin paralogue genes. We also showed that the average percentage of hemoglobin variants due to a HBA2 gene mutation (alpha2) is higher than the percentage of hemoglobin variants due to the same HBA1 gene mutation (alpha1) and that the alpha2/alpha1 ratio varied between variants. These alpha-globin chain variants have most likely occurred via recurrent mutations, gene conversion events, or both. Based on these data, we propose a nomenclature for hemoglobin variants that fall into this category.
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Affiliation(s)
- Kamran Moradkhani
- Biochimie Génétique, AP-HP, Hôpital Henri Mondor, 94010 Créteil, France
- INSERM, U841, 94010 Créteil, France
| | - Claude Préhu
- Biochimie Génétique, AP-HP, Hôpital Henri Mondor, 94010 Créteil, France
- INSERM, U841, 94010 Créteil, France
| | - John Old
- National Haemoglobinopathy Reference Laboratory, Oxford Haemophilia Centre, Churchill Hospital, Oxford, UK
| | - Shirley Henderson
- National Haemoglobinopathy Reference Laboratory, Oxford Haemophilia Centre, Churchill Hospital, Oxford, UK
| | - Vera Balamitsa
- Unit for Prevention of Thalassemia, Trikala General Hospital, Trikala, Greece
| | - Hong-Yuan Luo
- Departments of Medicine, Pathology and Laboratory Medicine, Boston University School of Medicine, Boston, MA USA
| | - Man-Chiu Poon
- Departments of Medicine and Pediatrics, University of Calgary and Calgary Health Region, Calgary, AB Canada
| | - David H. K. Chui
- Departments of Medicine, Pathology and Laboratory Medicine, Boston University School of Medicine, Boston, MA USA
| | - Henri Wajcman
- Biochimie Génétique, AP-HP, Hôpital Henri Mondor, 94010 Créteil, France
- INSERM, U841, 94010 Créteil, France
| | - George P. Patrinos
- MGC-Department of Cell Biology and Genetics, Erasmus University Medical Center, Faculty of Medicine and Health Sciences, P. O. Box 2040, 3000 CA Rotterdam, the Netherlands
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Abstract
Fetal hemoglobin (HbF), the predominant hemoglobin in the fetus, is a mixture of two molecular species (alpha(2)(G)gamma(2) and alpha(2)(A)gamma(2)) that differ only at position 136 reflecting the products of two nonallelic gamma-globin genes. At the time of birth, HbF accounts for approximately 70% of the total Hb. The (G)gamma:(A)gamma globin ratio in the HbF of normal newborn is 70:30 whereas in the trace amounts of HbF that is found in the adult it reverses to 40:60 because of a gamma- to beta-globin gene switch. Alterations of these ratios are indicative of a molecular defect at the level of the HbF synthesis. Qualitative hemoglobinopathies due to (G)gamma and (A)gamma chain structural variants, and quantitative hemoglobinopathies affecting the synthesis of HbF such as gamma-thalassemias, duplications, triplications, and even sextuplications of the gamma-globin genes, which may be detected in newborn blood lysates, have been described. Moreover, several pathological and nonpathological conditions affecting the beta-globin gene cluster, such as beta-thalassemia, sickle cell disease, deltabeta-thalassemia, and hereditary persistence of HbF syndromes, are characterized by the continued synthesis of gamma-globin chains in the adult life. Studies of these natural mutants associated with increased synthesis of HbF in adult life have provided considerable insight into the understanding of the control of globin gene expression and Hb switching.
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Affiliation(s)
- Laura Manca
- Department of Physiological, Biochemical and Cell Sciences, University of Sassari, Sassari, Italy
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Efremov GD. Forty-four years (1955-1999) devoted to hemoglobin research: Titus H. J. Huisman (1923-1999). Hemoglobin 2001; 25:125-68. [PMID: 11480778 DOI: 10.1081/hem-100104025] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
Affiliation(s)
- G D Efremov
- Macedonian Academy of Sciences and Arts, Research Center for Genetic Engineering and Biotechnology, Skopje, Republic of Macedonia.
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