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Yilmaz A, Koca M, Ercan S, Acar OO, Boga M, Sen A, Kurt A. Amelioration potential of synthetic oxime chemical cores against multiple sclerosis and Alzheimer's diseases: Evaluation in aspects of in silico and in vitro experiments. J Mol Struct 2024; 1318:139193. [DOI: 10.1016/j.molstruc.2024.139193] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/13/2024]
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Azyat K, Makeiff D, Smith B, Wiebe M, Launspach S, Wagner A, Kulka M, Godbert N. The Effect of Branched Alkyl Chain Length on the Properties of Supramolecular Organogels from Mono- N-Alkylated Primary Oxalamides. Gels 2022; 9:gels9010005. [PMID: 36661773 PMCID: PMC9858617 DOI: 10.3390/gels9010005] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2022] [Revised: 12/10/2022] [Accepted: 12/19/2022] [Indexed: 12/24/2022] Open
Abstract
Mono-N-alkylated primary oxalamide derivatives with different sized branched alkyl tail-groups were excellent low molecular weight gelators for a variety of different organic solvents with different polarities and hydrogen-bonding abilities. Solvent-gelator interactions were analyzed using Hansen solubility parameters, while 1H NMR and FTIR spectroscopy were used to probe the driving forces for the supramolecular gelation. The molecular structures of the twin tail-groups did not significantly affect the supramolecular gelation behavior in different solvents. However, for select solvents, the molecular structures of the tail-groups did have a significant effect on gel properties such as the critical gelator concentration, thermal stability, gel stiffness, gel strength, network morphology, and molecular packing. Finally, metabolic activity studies showed that the primary alkyl oxalamide gelators had no effect on the metabolic activity of mouse immune cells, which suggests that the compounds are not cytotoxic and are suitable for use in biomedical applications.
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Affiliation(s)
- Khalid Azyat
- Nanotechnology Research Center, National Research Council of Canada, 11421 Saskatchewan Drive, Edmonton, AB T6G 2M9, Canada
| | - Darren Makeiff
- Nanotechnology Research Center, National Research Council of Canada, 11421 Saskatchewan Drive, Edmonton, AB T6G 2M9, Canada
| | - Bradley Smith
- Nanotechnology Research Center, National Research Council of Canada, 11421 Saskatchewan Drive, Edmonton, AB T6G 2M9, Canada
| | - Mickie Wiebe
- Nanotechnology Research Center, National Research Council of Canada, 11421 Saskatchewan Drive, Edmonton, AB T6G 2M9, Canada
| | - Steve Launspach
- Nanotechnology Research Center, National Research Council of Canada, 11421 Saskatchewan Drive, Edmonton, AB T6G 2M9, Canada
| | - Ashley Wagner
- Nanotechnology Research Center, National Research Council of Canada, 11421 Saskatchewan Drive, Edmonton, AB T6G 2M9, Canada
| | - Marianna Kulka
- Nanotechnology Research Center, National Research Council of Canada, 11421 Saskatchewan Drive, Edmonton, AB T6G 2M9, Canada
| | - Nicolas Godbert
- Dipartimento di Chimica e Tecnologie Chimiche, Università della Calabria, 87036 Arcavacata di Rende, CS, Italy
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Kovač V, Kodrin I, Radošević K, Molčanov K, Adhikari B, Kraatz HB, Barišić L. Oxalamide-Bridged Ferrocenes: Conformational and Gelation Properties and In Vitro Antitumor Activity. Organometallics 2022. [DOI: 10.1021/acs.organomet.1c00661] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Veronika Kovač
- Department of Chemistry and Biochemistry, Faculty of Food Technology and Biotechnology, University of Zagreb, Pierottijeva 6, 10000 Zagreb, Croatia
| | - Ivan Kodrin
- Department of Organic Chemistry, Faculty of Science, University of Zagreb, Horvatovac 102A, 10000 Zagreb, Croatia
| | - Kristina Radošević
- Department of Biochemical Engineering, Faculty of Food Technology and Biotechnology, University of Zagreb, Pierottijeva 6, 10000 Zagreb, Croatia
| | - Krešimir Molčanov
- Division of Physical Chemistry, Ruđer Bošković Institute, Bijenička 54, 10000 Zagreb, Croatia
| | - Bimalendu Adhikari
- Department of Chemistry, National Institute of Technology, Rourkela, Sundargarh 769008, Odisha, India
| | - Heinz-Bernhard Kraatz
- Department of Physical and Environmental Sciences, University of Toronto Scarborough, 1265 Military Trail, Toronto, Ontario M1C 1A4, Canada
- Department of Chemistry, University of Toronto, 80 St George Street, Toronto, Ontario M5S 3H6, Canada
| | - Lidija Barišić
- Department of Chemistry and Biochemistry, Faculty of Food Technology and Biotechnology, University of Zagreb, Pierottijeva 6, 10000 Zagreb, Croatia
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Koca M, Bilginer S. New benzamide derivatives and their nicotinamide/cinnamamide analogs as cholinesterase inhibitors. Mol Divers 2021; 26:1201-1212. [PMID: 34165688 DOI: 10.1007/s11030-021-10249-9] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2021] [Accepted: 06/07/2021] [Indexed: 11/26/2022]
Abstract
In this study, a total of 18 new benzamide/ nicotinamide/ cinnamamide derivative compounds were designed and synthesized for the first time (except B1 and B5) by conventional and microwave irradiation methods. The chemical structures of the synthesized compounds were characterized by 1H NMR, 13C NMR, and HRMS spectra. In vitro acetylcholinesterase (AChE) and butyrylcholinesterase (BuChE) inhibition effects of the compounds were evaluated to find out new possible drug candidate molecule/s. According to the inhibition results, the IC50 values of the compounds synthesized were in the range of 10.66-83.03 nM towards AChE, while they were in the range of 32.74-66.68 nM towards BuChE. Tacrine was used as the reference drug and its IC50 values were 20.85 nM and 15.66 nM towards AChE and BuChE, respectively. The most active compounds B4 (IC50: 15.42 nM), N4 (IC50: 12.14 nM), and C4 (IC50: 10.67 nM) in each series towards AChE were docked at the binding site of AChE enzyme to explain the inhibitory activities of each series. On the other hand, the compounds B4, N4, and C4 showed satisfactory pharmacokinetic properties via the prediction of ADME profiles.
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Affiliation(s)
- Mehmet Koca
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Ataturk University, TR-25240, Erzurum, Turkey.
| | - Sinan Bilginer
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Ataturk University, TR-25240, Erzurum, Turkey
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Bingul M, Ercan S, Boga M. The design of novel 4,6-dimethoxyindole based hydrazide-hydrazones: Molecular modeling, synthesis and anticholinesterase activity. J Mol Struct 2020. [DOI: 10.1016/j.molstruc.2020.128202] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
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Kovač V, Radošević K, Bebek A, Makarević J, Štefanić Z, Barišić L, Žinić M, Rapić V. The first oxalamide-bridged ferrocene: Facile synthesis, preliminary conformational analysis and biological evaluation. Appl Organomet Chem 2016. [DOI: 10.1002/aoc.3653] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Affiliation(s)
- Veronika Kovač
- Department of Chemistry and Biochemistry, Faculty of Food Technology and Biotechnology; University of Zagreb; Pierottijeva 6 Zagreb Croatia
| | - Kristina Radošević
- Department of Biochemical Engineering; Laboratory for Cell Technology, Application and Biotransformation, Faculty of Food Technology and Biotechnology; Pierottijeva 6 Zagreb Croatia
| | - Anica Bebek
- Department of Chemistry and Biochemistry, Faculty of Food Technology and Biotechnology; University of Zagreb; Pierottijeva 6 Zagreb Croatia
| | - Janja Makarević
- Division of Organic Chemistry and Biochemistry; Ruđer Bošković Institute; POB 180 10002 Zagreb Croatia
| | - Zoran Štefanić
- Division of Physical Chemistry; Ruđer Bošković Institute; POB 180 10002 Zagreb Croatia
| | - Lidija Barišić
- Department of Chemistry and Biochemistry, Faculty of Food Technology and Biotechnology; University of Zagreb; Pierottijeva 6 Zagreb Croatia
| | - Mladen Žinić
- Division of Organic Chemistry and Biochemistry; Ruđer Bošković Institute; POB 180 10002 Zagreb Croatia
| | - Vladimir Rapić
- Department of Chemistry and Biochemistry, Faculty of Food Technology and Biotechnology; University of Zagreb; Pierottijeva 6 Zagreb Croatia
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Koca M, Yerdelen KO, Anil B, Kasap Z, Sevindik H, Ozyurek I, Gunesacar G, Turkaydin K. Design, synthesis and biological activity of 1H-indene-2-carboxamides as multi-targeted anti-Alzheimer agents. J Enzyme Inhib Med Chem 2016; 31:13-23. [DOI: 10.1080/14756366.2016.1186019] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022] Open
Affiliation(s)
| | | | | | | | - Handan Sevindik
- Department of Pharmacognosy, Ataturk University, Erzurum, Turkey
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Yerdelen KO, Koca M, Anil B, Sevindik H, Kasap Z, Halici Z, Turkaydin K, Gunesacar G. Synthesis of donepezil-based multifunctional agents for the treatment of Alzheimer’s disease. Bioorg Med Chem Lett 2015; 25:5576-82. [DOI: 10.1016/j.bmcl.2015.10.051] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2015] [Revised: 10/14/2015] [Accepted: 10/16/2015] [Indexed: 10/22/2022]
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