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Xu H, Zhu Y, Zheng D, Yang S. Molecular identification and phylogenetic analysis of mitogenome of the Xenocypris davidi from Cao’e River. Mitochondrial DNA B Resour 2019; 4:3998-3999. [PMID: 33366288 PMCID: PMC7707671 DOI: 10.1080/23802359.2019.1688099] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022] Open
Abstract
In this study, the complete mitochondrial genome sequence of a Xenocypris davidi from Cao’e River was sequenced. The complete mitogenome of X. davidi was 16,630 bp in length, it contains the structure of 22 transfer RNA genes, 13 protein coding genes, 2 ribosomal RNA genes, and 1 non-coding region. The gene arrangement and organization in the mitogenome of X. davidi were in accordance with other Cyprinidae fishes. The results of phylogenetic analysis revealed that the mitochondrial genome sequence could provide useful information for the conservation genetics and evolution study of X. davidi.
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Affiliation(s)
- Haifang Xu
- College of Life Sciences, Shaoxing University, Shaoxing, PR China
| | - Yinjian Zhu
- College of Life Sciences, Shaoxing University, Shaoxing, PR China
| | - Daheng Zheng
- College of Life Sciences, Shaoxing University, Shaoxing, PR China
| | - Shoubao Yang
- College of Life Sciences, Shaoxing University, Shaoxing, PR China
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Han J, Chen X, Lin Y, Ying C, Lu Y, Qian Y, Yang P, Xia L, Zhang Q, Zhang D, Meng Y, Yang S. Identification and phylogenetic analysis of the mitogenome from Acrossocheilus wenchowensis. Mitochondrial DNA B Resour 2019. [DOI: 10.1080/23802359.2019.1591176] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022] Open
Affiliation(s)
- Jiwei Han
- College of Life Sciences, Shaoxing University, Shaoxing, P. R. China
| | - Xuxu Chen
- College of Life Sciences, Shaoxing University, Shaoxing, P. R. China
| | - Yuru Lin
- College of Life Sciences, Shaoxing University, Shaoxing, P. R. China
| | - Chenyi Ying
- College of Life Sciences, Shaoxing University, Shaoxing, P. R. China
| | - Yi Lu
- College of Life Sciences, Shaoxing University, Shaoxing, P. R. China
| | - Yaoxuan Qian
- College of Life Sciences, Shaoxing University, Shaoxing, P. R. China
| | - Pengjie Yang
- College of Life Sciences, Shaoxing University, Shaoxing, P. R. China
| | - Luping Xia
- College of Life Sciences, Shaoxing University, Shaoxing, P. R. China
| | - Qi Zhang
- College of Life Sciences, Shaoxing University, Shaoxing, P. R. China
| | - Dongdong Zhang
- College of Life Sciences, Shaoxing University, Shaoxing, P. R. China
| | - Yiping Meng
- College of Life Sciences, Shaoxing University, Shaoxing, P. R. China
| | - Shoubao Yang
- College of Life Sciences, Shaoxing University, Shaoxing, P. R. China
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Li G, Li W, Lv S, Li C, Qian Y, Xu J, Lu Y, Lin Y, Yang P, Lin Z, Yang S. Identification and phylogenetic analysis of the mitogenome of Sarcocheilichthys parvus Nichols (Cypriniformes: Cyprinidae). Mitochondrial DNA A DNA Mapp Seq Anal 2015; 27:3542-3. [PMID: 26287583 DOI: 10.3109/19401736.2015.1074209] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
Abstract
In the present study, the complete mitogenome sequence of a Sarcocheilichthys parvus Nichols was sequenced and identified. It contained 22 tRNA genes, 13 protein-coding genes, 2 rRNA genes and 2 non-coding regions. The phylogenetic analysis showed that the mitogenome sequence could be useful data in the field of systematics and conservation biology for S. parvus Nichols and other aquatic species.
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Affiliation(s)
- Gaopeng Li
- a College of Life Sciences, Shaoxing University , Shaoxing , P.R. China and
| | - Wenwen Li
- a College of Life Sciences, Shaoxing University , Shaoxing , P.R. China and
| | - Sisi Lv
- a College of Life Sciences, Shaoxing University , Shaoxing , P.R. China and
| | - Chen Li
- a College of Life Sciences, Shaoxing University , Shaoxing , P.R. China and
| | - Yaoxuan Qian
- a College of Life Sciences, Shaoxing University , Shaoxing , P.R. China and
| | - Jie Xu
- a College of Life Sciences, Shaoxing University , Shaoxing , P.R. China and
| | - Yi Lu
- a College of Life Sciences, Shaoxing University , Shaoxing , P.R. China and
| | - Yuru Lin
- a College of Life Sciences, Shaoxing University , Shaoxing , P.R. China and
| | - Pengjie Yang
- a College of Life Sciences, Shaoxing University , Shaoxing , P.R. China and
| | - Zhihua Lin
- b Zhejiang Key Laboratory of Aquatic Germplasm Resources , Zhejiang Wanli University , Ningbo , P.R. China
| | - Shoubao Yang
- a College of Life Sciences, Shaoxing University , Shaoxing , P.R. China and
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Jia L, Zheng D, Lv S, Shao W, Wang H, Qian Y, Yang S. Identification and analysis of the mitogenome of Sarcocheilichthys parvus (Cypriniformes: Cyprinidae). Mitochondrial DNA A DNA Mapp Seq Anal 2014; 27:2253-4. [PMID: 25423513 DOI: 10.3109/19401736.2014.984167] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
Abstract
The complete mitogenome sequence of Sarcocheilichthys parvus was identified using polymerase chain reaction and sequenced with primer walking method. The complete mitogenome was 16,674 bp in length, containing 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes and 2 non-coding regions. The gene arrangement and composition of S. parvus was similar to most other fishes.
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Affiliation(s)
- Lanlan Jia
- a College of Life Sciences, Shaoxing University , Shaoxing , P.R. China
| | - Daheng Zheng
- a College of Life Sciences, Shaoxing University , Shaoxing , P.R. China
| | - Sisi Lv
- a College of Life Sciences, Shaoxing University , Shaoxing , P.R. China
| | - Weishan Shao
- a College of Life Sciences, Shaoxing University , Shaoxing , P.R. China
| | - Heng Wang
- a College of Life Sciences, Shaoxing University , Shaoxing , P.R. China
| | - Yaoxuan Qian
- a College of Life Sciences, Shaoxing University , Shaoxing , P.R. China
| | - Shoubao Yang
- a College of Life Sciences, Shaoxing University , Shaoxing , P.R. China
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Lv S, Wang H, Qian Y, Shao W, Jia L, Huang P, Yang S, Gu J. Characterization of the complete mitochondrial genome of Hemibarbus sp.090914 (Cypriniformes: Cyprinidae). Mitochondrial DNA A DNA Mapp Seq Anal 2014; 27:1961-2. [PMID: 25329258 DOI: 10.3109/19401736.2014.971307] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
Abstract
Hemibarbus is a genus of cyprinid fishes distributed in eastern Asia. In the present study, we report here the complete mitochondrial genome of the Hemibarbus sp.090914 (Cypriniformes: Cyprinidae). Our results show that the complete mitochondrial DNA of Hemibarbus sp.090914 is 16,610 bp in length, and predicted to encode all the 37 genes that are typical for the vertebrates.
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Affiliation(s)
- Sisi Lv
- a College of Life Sciences, Shaoxing University , Shaoxing , P.R.China
| | - Heng Wang
- a College of Life Sciences, Shaoxing University , Shaoxing , P.R.China
| | - Yaoxuan Qian
- a College of Life Sciences, Shaoxing University , Shaoxing , P.R.China
| | - Weishan Shao
- a College of Life Sciences, Shaoxing University , Shaoxing , P.R.China
| | - Lanlan Jia
- a College of Life Sciences, Shaoxing University , Shaoxing , P.R.China
| | - Pingping Huang
- a College of Life Sciences, Shaoxing University , Shaoxing , P.R.China
| | - Shoubao Yang
- a College of Life Sciences, Shaoxing University , Shaoxing , P.R.China
| | - Jiangwen Gu
- a College of Life Sciences, Shaoxing University , Shaoxing , P.R.China
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