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Liu K, Jin Y, Zhang FY, Zhang YZ, Quan XQ, Han QD, Liu LX, Liu YG, Lv SJ, Qu XM. The complete mitochondrial DNA sequence of Yimeng black goat ( Capra hircus) and its potential application in mutton discrimination. MITOCHONDRIAL DNA PART B-RESOURCES 2020; 5:2303-2305. [PMID: 33457768 PMCID: PMC7782185 DOI: 10.1080/23802359.2020.1773337] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
Yimeng black goat is one of the national breeds of geographical indication in China and is one of the key protected local livestock and poultry breeds of Shandong province. The complete mitochondrial genome sequence of Yimeng black goat was investigated in this study (GenBank accession no. MT134111). The mitogenome (16,640 bp) consisted of a non-coding control region (D-loop region), two ribosomal RNA (rRNA) genes, 13 protein-coding genes (PCGs), and 22 transfer RNA (tRNA) genes. The complete mitochondrial genome sequence and the neighbour-joining tree of the Yimeng black goat would contribute to further study in genetic mechanism and phylogenomic research of goats.
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Affiliation(s)
- Ke Liu
- College of Life Sciences and Technology, Xinjiang University, Urumqi, China.,College of Life Sciences, Linyi University, Linyi, China
| | - Ying Jin
- Qingdao Customs District P.R. China, Qingdao, China
| | - Feng-Yan Zhang
- Qingdao Institute for Food and Drug Control, Qingdao, China
| | - Yan-Zhen Zhang
- College of Life Sciences and Technology, Xinjiang University, Urumqi, China.,College of Life Sciences, Linyi University, Linyi, China
| | - Xian-Qing Quan
- College of Life Sciences, Linyi University, Linyi, China
| | - Qing-Dian Han
- College of Life Sciences, Linyi University, Linyi, China
| | - Ling-Xiao Liu
- Linyi Academy of Agricultural Sciences, Linyi, China
| | - Yun-Guo Liu
- College of Life Sciences, Linyi University, Linyi, China
| | - Shen-Jin Lv
- College of Life Sciences, Linyi University, Linyi, China
| | - Xiao-Ming Qu
- Liaoning Center for Disease Control and Prevention, Shenyang, China
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E GX, Huang YF, Narisu, Gao HJ, Zhao ZQ, Jiang CD, Zhang JH, Ma YH, Chen LP, Zeng Y, Sun YW, Zhao YJ. A complete mitochondrial genome of Dazu Black goat. Mitochondrial DNA A DNA Mapp Seq Anal 2015; 27:3171-2. [PMID: 25731719 DOI: 10.3109/19401736.2015.1007320] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
Abstract
Dazu Black goat is an indigenous goat genetic resource in Southwest of China. Here, we describe its complete mitochondrial genome sequence. The mitogenome is 16,641 bp in length, consisting of 13 protein-coding genes, 22 transfer RNA (tRNA) genes, 2 ribosomal RNA (rRNA) genes and a control region. As in other mammals, most mitochondrial genes are encoded on the heavy strand, except for ND6 and eight tRNA genes, which are encoded on the light strand. Its overall base composition is A: 33.5%, T: 27.3%, C: 26.1% and G: 13.1%. The complete mitogenome of the indigenous goat could provide important data to further explore the taxonomic status of the subspecies and also provide a starting point for further phylogenetic studies.
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Affiliation(s)
- Guang-Xin E
- a College of Animal Science and Technology, Chongqing Key Laboratory of Forage & Herbivore , Chongqing Engineering Research Centre for Herbivores Resource Protection and Utilization, Southwest University , Chongqing , China and
| | - Yong-Fu Huang
- a College of Animal Science and Technology, Chongqing Key Laboratory of Forage & Herbivore , Chongqing Engineering Research Centre for Herbivores Resource Protection and Utilization, Southwest University , Chongqing , China and
| | - Narisu
- a College of Animal Science and Technology, Chongqing Key Laboratory of Forage & Herbivore , Chongqing Engineering Research Centre for Herbivores Resource Protection and Utilization, Southwest University , Chongqing , China and
| | - Hui-Jiang Gao
- b Institute of Animal Science, Chinese Academy of Agricultural Sciences (CAAS) , Beijing , China
| | - Zhong-Quan Zhao
- a College of Animal Science and Technology, Chongqing Key Laboratory of Forage & Herbivore , Chongqing Engineering Research Centre for Herbivores Resource Protection and Utilization, Southwest University , Chongqing , China and
| | - Cao-De Jiang
- a College of Animal Science and Technology, Chongqing Key Laboratory of Forage & Herbivore , Chongqing Engineering Research Centre for Herbivores Resource Protection and Utilization, Southwest University , Chongqing , China and
| | - Jia-Hua Zhang
- a College of Animal Science and Technology, Chongqing Key Laboratory of Forage & Herbivore , Chongqing Engineering Research Centre for Herbivores Resource Protection and Utilization, Southwest University , Chongqing , China and
| | - Yue-Hui Ma
- b Institute of Animal Science, Chinese Academy of Agricultural Sciences (CAAS) , Beijing , China
| | - Li-Peng Chen
- a College of Animal Science and Technology, Chongqing Key Laboratory of Forage & Herbivore , Chongqing Engineering Research Centre for Herbivores Resource Protection and Utilization, Southwest University , Chongqing , China and
| | - Yan Zeng
- a College of Animal Science and Technology, Chongqing Key Laboratory of Forage & Herbivore , Chongqing Engineering Research Centre for Herbivores Resource Protection and Utilization, Southwest University , Chongqing , China and
| | - Ya-Wang Sun
- a College of Animal Science and Technology, Chongqing Key Laboratory of Forage & Herbivore , Chongqing Engineering Research Centre for Herbivores Resource Protection and Utilization, Southwest University , Chongqing , China and
| | - Yong-Ju Zhao
- a College of Animal Science and Technology, Chongqing Key Laboratory of Forage & Herbivore , Chongqing Engineering Research Centre for Herbivores Resource Protection and Utilization, Southwest University , Chongqing , China and
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