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Atal DK, Singh M. Effectual seizure detection using MBBF-GPSO with CNN network. Cogn Neurodyn 2024; 18:907-918. [PMID: 38826653 PMCID: PMC11143161 DOI: 10.1007/s11571-023-09943-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2022] [Revised: 12/23/2022] [Accepted: 02/05/2023] [Indexed: 03/02/2023] Open
Abstract
EEG is the most common test for diagnosing a seizure, where it presents information about the electrical activity of the brain. Automatic Seizure detection is one of the challenging tasks due to limitations of conventional methods with regard to inefficient feature selection, increased computational complexity and time and less accuracy. The situation calls for a practical framework to achieve better performance for detecting the seizure effectively. Hence, this study proposes modified Blackman bandpass filter-greedy particle swarm optimization (MBBF-GPSO) with convolutional neural network (CNN) for effective seizure detection. In this case, unwanted signals (noise) is eliminated by MBBF as it possess better ability in stopband attenuation, and, only the optimized features are selected using GPSO. For enhancing the efficacy of obtaining optimal solutions in GPSO, the time and frequency domain is extracted to complement it. Through this process, an optimized features are attained by MBBF-GPSO. Then, the CNN layer is employed for obtaining the productive classification output using the objective function. Here, CNN is employed due to its ability in automatically learning distinct features for individual class. Such advantages of the proposed system have made it explore better performance in seizure detection that is confirmed through performance and comparative analysis.
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Affiliation(s)
- Dinesh Kumar Atal
- Department of Electrical Engineering, Delhi Technological University, Bawana Road, Delhi, 110042 India
| | - Mukhtiar Singh
- Department of Electrical Engineering, Delhi Technological University, Bawana Road, Delhi, 110042 India
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2
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Liao J, Wang J, Zhan CA, Yang F. Parameterized aperiodic and periodic components of single-channel EEG enables reliable seizure detection. Phys Eng Sci Med 2024; 47:31-47. [PMID: 37747646 DOI: 10.1007/s13246-023-01340-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/05/2023] [Accepted: 09/14/2023] [Indexed: 09/26/2023]
Abstract
Although it is clinically important, a reliable and economical solution to automatic seizure detection for patients at home is yet to be developed. Traditional algorithms rely on multi-channel EEG signals and features of canonical EEG power description. This study is aimed to propose an effective single-channel EEG seizure detection method centered on novel EEG power parameterization and channel selection algorithms. We employed the publicly available multi-channel CHB-MIT Scalp EEG database to gauge the effectiveness of our approach. We first adapted a power spectra parameterization algorithm to characterize the aperiodic and periodic components of the ictal and inter-ictal EEGs. We selected four features based on their statistical significance and interpretability, and developed a ranking approach to channel selection for each patient. We then tested the effectiveness of our approaches to channel and feature selection for automatic seizure detection using support vector machine (SVM) as the classifier. The performance of our algorithm was evaluated using five-fold cross-validation and compared to those methods of comparable complexity (using one or two channels of EEG), in terms of accuracy, specificity, sensitivity, precision and F1 score. Some channels of EEG signals show strikingly different distributions of PSD features between the ictal and inter-ictal states. Four features including the offset and exponent parameters for the aperiodic component and the first and second highest total power (TPW1 and TPW2) form the basis of channel selection and the input of SVM classifier. The selected channel is found to be patient-specific. Our approach has achieved a mean sensitivity of 95.6%, specificity of 99.2%, accuracy of 98.6%, precision of 95.5%, and F1 score of 95.5%. Compared with algorithms in previous studies that used one or two channels of EEG signals, ours outperforms in specificity and accuracy with comparable sensitivity. EEG power spectra parameterization to feature extraction and feature ranking-based channel selection are found to enable efficient and effective automatic seizure detection based on single-channel EEG signal.
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Affiliation(s)
- Jiahui Liao
- School of Biomedical Engineering, Southern Medical University, Guangzhou, 510515, China
- Guangdong Provincial Key Laboratory of Medical Image Processing, Southern Medical University, Guangzhou, China
| | - Jun Wang
- Department of Neurosurgery, Nanfang Hospital, Southern Medical University, Guangzhou, 510515, China
| | - Chang'an A Zhan
- School of Biomedical Engineering, Southern Medical University, Guangzhou, 510515, China.
- Guangdong Provincial Key Laboratory of Medical Image Processing, Southern Medical University, Guangzhou, China.
- Department of Rehabilitation Medicine, Zhujiang Hospital, Southern Medical University, Guangzhou, 510280, China.
| | - Feng Yang
- School of Biomedical Engineering, Southern Medical University, Guangzhou, 510515, China.
- Guangdong Provincial Key Laboratory of Medical Image Processing, Southern Medical University, Guangzhou, China.
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3
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Chen W, Wang Y, Ren Y, Jiang H, Du G, Zhang J, Li J. An automated detection of epileptic seizures EEG using CNN classifier based on feature fusion with high accuracy. BMC Med Inform Decis Mak 2023; 23:96. [PMID: 37217878 DOI: 10.1186/s12911-023-02180-w] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2023] [Accepted: 04/21/2023] [Indexed: 05/24/2023] Open
Abstract
BACKGROUND Epilepsy is a neurological disorder that is usually detected by electroencephalogram (EEG) signals. Since manual examination of epilepsy seizures is a laborious and time-consuming process, lots of automatic epilepsy detection algorithms have been proposed. However, most of the available classification algorithms for epilepsy EEG signals adopted a single feature extraction, in turn to result in low classification accuracy. Although a small account of studies have carried out feature fusion, the computational efficiency is reduced due to too many features, because there are also some poor features that interfere with the classification results. METHODS In order to solve the above problems, an automatic recognition method of epilepsy EEG signals based on feature fusion and selection is proposed in this paper. Firstly, the Approximate Entropy (ApEn), Fuzzy Entropy (FuzzyEn), Sample Entropy (SampEn), and Standard Deviation (STD) mixed features of the subband obtained by the Discrete Wavelet Transform (DWT) decomposition of EEG signals are extracted. Secondly, the random forest algorithm is used for feature selection. Finally, the Convolutional Neural Network (CNN) is used to classify epilepsy EEG signals. RESULTS The empirical evaluation of the presented algorithm is performed on the benchmark Bonn EEG datasets and New Delhi datasets. In the interictal and ictal classification tasks of Bonn datasets, the proposed model achieves an accuracy of 99.9%, a sensitivity of 100%, a precision of 99.81%, and a specificity of 99.8%. For the interictal-ictal case of New Delhi datasets, the proposed model achieves a classification accuracy of 100%, a sensitivity of 100%, a specificity of 100%, and a precision of 100%. CONCLUSION The proposed model can effectively realize the high-precision automatic detection and classification of epilepsy EEG signals. This model can provide high-precision automatic detection capability for clinical epilepsy EEG detection. We hope to provide positive implications for the prediction of seizure EEG.
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Affiliation(s)
- Wenna Chen
- The First Affiliated Hospital, and College of Clinical Medicine of Henan University of Science and Technology, Luoyang, China
| | - Yixing Wang
- College of Information Engineering, Henan University of Science and Technology, Luoyang, China
| | - Yuhao Ren
- College of Information Engineering, Henan University of Science and Technology, Luoyang, China
| | - Hongwei Jiang
- The First Affiliated Hospital, and College of Clinical Medicine of Henan University of Science and Technology, Luoyang, China.
| | - Ganqin Du
- The First Affiliated Hospital, and College of Clinical Medicine of Henan University of Science and Technology, Luoyang, China.
| | - Jincan Zhang
- College of Information Engineering, Henan University of Science and Technology, Luoyang, China.
| | - Jinghua Li
- College of Information Engineering, Henan University of Science and Technology, Luoyang, China
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Peh WY, Thangavel P, Yao Y, Thomas J, Tan YL, Dauwels J. Six-Center Assessment of CNN-Transformer with Belief Matching Loss for Patient-Independent Seizure Detection in EEG. Int J Neural Syst 2023; 33:2350012. [PMID: 36809996 DOI: 10.1142/s0129065723500120] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
Neurologists typically identify epileptic seizures from electroencephalograms (EEGs) by visual inspection. This process is often time-consuming, especially for EEG recordings that last hours or days. To expedite the process, a reliable, automated, and patient-independent seizure detector is essential. However, developing a patient-independent seizure detector is challenging as seizures exhibit diverse characteristics across patients and recording devices. In this study, we propose a patient-independent seizure detector to automatically detect seizures in both scalp EEG and intracranial EEG (iEEG). First, we deploy a convolutional neural network with transformers and belief matching loss to detect seizures in single-channel EEG segments. Next, we extract regional features from the channel-level outputs to detect seizures in multi-channel EEG segments. At last, we apply post-processing filters to the segment-level outputs to determine seizures' start and end points in multi-channel EEGs. Finally, we introduce the minimum overlap evaluation scoring as an evaluation metric that accounts for minimum overlap between the detection and seizure, improving upon existing assessment metrics. We trained the seizure detector on the Temple University Hospital Seizure (TUH-SZ) dataset and evaluated it on five independent EEG datasets. We evaluate the systems with the following metrics: sensitivity (SEN), precision (PRE), and average and median false positive rate per hour (aFPR/h and mFPR/h). Across four adult scalp EEG and iEEG datasets, we obtained SEN of 0.617-1.00, PRE of 0.534-1.00, aFPR/h of 0.425-2.002, and mFPR/h of 0-1.003. The proposed seizure detector can detect seizures in adult EEGs and takes less than 15[Formula: see text]s for a 30[Formula: see text]min EEG. Hence, this system could aid clinicians in reliably identifying seizures expeditiously, allocating more time for devising proper treatment.
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Affiliation(s)
- Wei Yan Peh
- Interdisciplinary Graduate School (IGS), Nanyang Technological University, Singapore 639798, Singapore
| | - Prasanth Thangavel
- Interdisciplinary Graduate School (IGS), Nanyang Technological University, Singapore 639798, Singapore
| | - Yuanyuan Yao
- Katholieke Universiteit Leuven, Oude Markt 13, 3000 Leuven, Belgium
| | - John Thomas
- Montreal Neurological Institute, McGill University, Montreal QC H3A 2B4, Canada
| | - Yee-Leng Tan
- National Neuroscience Institute, Singapore 308433, Singapore
| | - Justin Dauwels
- Department of Microelectronics, Delft, University of Technology, 2628 CD Delft, Netherlands
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5
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Morteza Ghazali S, Alizadeh M, Mazloum J, Baleghi Y. Modified binary salp swarm algorithm in EEG signal classification for epilepsy seizure detection. Biomed Signal Process Control 2022. [DOI: 10.1016/j.bspc.2022.103858] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
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6
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Sabor N, Mohammed H, Li Z, Wang G. BHI-Net: Brain-Heart Interaction-Based Deep Architectures for Epileptic Seizures and Firing Location Detection. IEEE Trans Neural Syst Rehabil Eng 2022; 30:1576-1588. [PMID: 35675254 DOI: 10.1109/tnsre.2022.3181151] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
Automatic detection of epileptic seizures is still a challenging problem due to the intolerance of EEG. Introducing ECG can help with EEG for detecting seizures. However, the existing methods depended on fusing either the extracted features or the classification results of EEG-only and ECG-only with ignoring the interaction between them, so the detection rate did not improve much. Also, all EEG channels were considered in a complex manner. Moreover, the detection of epilepsy firing location, which is an important issue for diagnosing epilepsy, is not considered before. Therefore, we propose a new method based on the brain-heart interaction (BHI) for detecting the seizure onset and its firing location in the brain with lower complexity and better performance. BHI allows us to study the nonlinear coupling and variation of phase-synchronization between brain regions and heart activity, which are effective for distinguishing seizures. In our method, the EEG channels are mapped into two surrogate channels to reduce the computational complexity. Moreover, the firing location detector is triggered only once the seizure is detected to save the system's power. Evaluation using different proposed classification networks based on the TUSZ, the largest available EEG/ECG dataset with 315 subjects and 7 seizure types, showed that our BHI method improves the sensitivity by 48% with only 4 false alarms/24h compared to using only EEG. Moreover, it outperforms the performance of the average human detector based on the quantitative EEG tools by achieving a sensitivity of 68.2% with 11.9 false alarms/ 24h and a latency of 11.94 sec.
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Hsieh JC, Li Y, Wang H, Perz M, Tang Q, Tang KWK, Pyatnitskiy I, Reyes R, Ding H, Wang H. Design of hydrogel-based wearable EEG electrodes for medical applications. J Mater Chem B 2022; 10:7260-7280. [PMID: 35678148 DOI: 10.1039/d2tb00618a] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
The electroencephalogram (EEG) is considered to be a promising method for studying brain disorders. Because of its non-invasive nature, subjects take a lower risk compared to some other invasive methods, while the systems record the brain signal. With the technological advancement of neural and material engineering, we are in the process of achieving continuous monitoring of neural activity through wearable EEG. In this article, we first give a brief introduction to EEG bands, circuits, wired/wireless EEG systems, and analysis algorithms. Then, we review the most recent advances in the interfaces used for EEG recordings, focusing on hydrogel-based EEG electrodes. Specifically, the advances for important figures of merit for EEG electrodes are reviewed. Finally, we summarize the potential medical application of wearable EEG systems.
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Affiliation(s)
- Ju-Chun Hsieh
- Department of Biomedical Engineering, The University of Texas at Austin, Austin, TX 78712, USA.
| | - Yang Li
- Department of Chemical Engineering, Polytechnique Montréal, Montréal, Québec H3C3J7, Canada
| | - Huiqian Wang
- Department of Mathematics, The University of Texas at Austin, Austin, TX 78712, USA
| | - Matt Perz
- Department of Biomedical Engineering, The University of Texas at Austin, Austin, TX 78712, USA.
| | - Qiong Tang
- Department of Aerospace Engineering and Engineering Mechanics, The University of Texas at Austin, Austin, TX 78712, USA
| | - Kai Wing Kevin Tang
- Department of Biomedical Engineering, The University of Texas at Austin, Austin, TX 78712, USA.
| | - Ilya Pyatnitskiy
- Department of Biomedical Engineering, The University of Texas at Austin, Austin, TX 78712, USA.
| | - Raymond Reyes
- Department of Biomedical Engineering, The University of Texas at Austin, Austin, TX 78712, USA.
| | - Hong Ding
- Department of Biomedical Engineering, The University of Texas at Austin, Austin, TX 78712, USA.
| | - Huiliang Wang
- Department of Biomedical Engineering, The University of Texas at Austin, Austin, TX 78712, USA.
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Wu YY, Hu YS, Wang J, Zang YF, Zhang Y. Toward Precise Localization of Abnormal Brain Activity: 1D CNN on Single Voxel fMRI Time-Series. Front Comput Neurosci 2022; 16:822237. [PMID: 35573265 PMCID: PMC9094401 DOI: 10.3389/fncom.2022.822237] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2021] [Accepted: 03/31/2022] [Indexed: 11/13/2022] Open
Abstract
Functional magnetic resonance imaging (fMRI) is one of the best techniques for precise localization of abnormal brain activity non-invasively. Machine-learning approaches have been widely used in neuroimaging studies; however, few studies have investigated the single-voxel modeling of fMRI data under cognitive tasks. We proposed a hybrid one-dimensional (1D) convolutional neural network (1D-CNN) based on the temporal dynamics of single-voxel fMRI time-series and successfully differentiated two continuous task states, namely, self-initiated (SI) and visually guided (VG) motor tasks. First, 25 activation peaks were identified from the contrast maps of SI and VG tasks in a blocked design. Then, the fMRI time-series of each peak voxel was transformed into a temporal-frequency domain by using continuous wavelet transform across a broader frequency range (0.003–0.313 Hz, with a step of 0.01 Hz). The transformed time-series was inputted into a 1D-CNN model for the binary classification of SI and VG continuous tasks. Compared with the univariate analysis, e.g., amplitude of low-frequency fluctuation (ALFF) at each frequency band, including, wavelet-ALFF, the 1D-CNN model highly outperformed wavelet-ALFF, with more efficient decoding models [46% of 800 models showing area under the curve (AUC) > 0.61] and higher decoding accuracies (94% of the efficient models), especially on the high-frequency bands (>0.1 Hz). Moreover, our results also demonstrated the advantages of wavelet decompositions over the original fMRI series by showing higher decoding performance on all peak voxels. Overall, this study suggests a great potential of single-voxel analysis using 1D-CNN and wavelet transformation of fMRI series with continuous, naturalistic, steady-state task design or resting-state design. It opens new avenues to precise localization of abnormal brain activity and fMRI-guided precision brain stimulation therapy.
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Affiliation(s)
- Yun-Ying Wu
- Center for Cognition and Brain Disorders and the Affiliated Hospital, Hangzhou Normal University, Hangzhou, China
- Zhejiang Key Laboratory for Research in Assessment of Cognitive Impairments, Hangzhou, China
- Institutes of Psychological Sciences, Hangzhou Normal University, Hangzhou, China
| | - Yun-Song Hu
- Center for Cognition and Brain Disorders and the Affiliated Hospital, Hangzhou Normal University, Hangzhou, China
- Zhejiang Key Laboratory for Research in Assessment of Cognitive Impairments, Hangzhou, China
- Institutes of Psychological Sciences, Hangzhou Normal University, Hangzhou, China
| | - Jue Wang
- Institute of Sports Medicine and Health, Chengdu Sport University, Chengdu, China
| | - Yu-Feng Zang
- Center for Cognition and Brain Disorders and the Affiliated Hospital, Hangzhou Normal University, Hangzhou, China
- Zhejiang Key Laboratory for Research in Assessment of Cognitive Impairments, Hangzhou, China
- Institutes of Psychological Sciences, Hangzhou Normal University, Hangzhou, China
- Transcranial Magnetic Stimulation Center, Deqing Hospital of Hangzhou Normal University, Huzhou, China
- *Correspondence: Yu-Feng Zang
| | - Yu Zhang
- Research Center for Healthcare Data Science, Zhejiang Lab, Hangzhou, China
- Yu Zhang
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9
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Ru Y, Li J, Chen H, Li J. Epilepsy Detection Based on Variational Mode Decomposition and Improved Sample Entropy. COMPUTATIONAL INTELLIGENCE AND NEUROSCIENCE 2022; 2022:6180441. [PMID: 35087582 PMCID: PMC8789442 DOI: 10.1155/2022/6180441] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/08/2021] [Revised: 11/26/2021] [Accepted: 12/31/2021] [Indexed: 11/17/2022]
Abstract
Epilepsy detection based on electroencephalogram (EEG) signal is of great significance to diagnosis and treatment of epilepsy. The denoised EEG signal is adopted by most traditional epilepsy detection methods. But due to nonideal denoising ability, the loss of local information and residual noise will occur, resulting in detection performance degradation. To solve the problem, the paper proposed an epilepsy detection method in noisy environment. Although epileptic signals and nonepileptic signals have some discrimination, they need to overcome the interference of noise. Hence, the improved sample entropy and phase synchronization indexes of corresponding 2 intrinsic mode functions (IMFs) caused by variational mode decomposition (VMD) are proposed as features, which can reduce the impact of noise on detection performance. The experimental results show that the accuracy, sensitivity, and specificity are 91.78%, 91.27%, and 93.61%, respectively. It can be used as an auxiliary method for clinical treatment of epilepsy.
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Affiliation(s)
- Yandong Ru
- College of Electronic Engineering, Heilongjiang University, Harbin 150006, China
- College of Electronic and Information Engineering, Heilongjiang University of Science and Technology, Harbin 150027, China
| | - Jinbao Li
- Shandong Artificial Intelligence Institute, Qilu University of Technology (Shandong Academy of Science), Jinan 250013, China
| | - Hangyu Chen
- College of Electronic and Information Engineering, Heilongjiang University of Science and Technology, Harbin 150027, China
| | - Jiacheng Li
- College of Electronic and Information Engineering, Heilongjiang University of Science and Technology, Harbin 150027, China
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10
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A Study on Seizure Detection of EEG Signals Represented in 2D. SENSORS 2021; 21:s21155145. [PMID: 34372381 PMCID: PMC8348755 DOI: 10.3390/s21155145] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/05/2021] [Revised: 07/25/2021] [Accepted: 07/26/2021] [Indexed: 12/11/2022]
Abstract
A seizure is a neurological disorder caused by abnormal neuronal discharges in the brain, which severely reduces the quality of life of patients and often endangers their lives. Automatic seizure detection is an important research area in the treatment of seizure and is a prerequisite for seizure intervention. Deep learning has been widely used for automatic detection of seizures, and many related research works decomposed the electroencephalogram (EEG) raw signal with a time window to obtain EEG signal slices, then performed feature extraction on the slices, and represented the obtained features as input data for neural networks. There are various methods for EEG signal decomposition, feature extraction, and representation, and most of the studies have been based on fixed hardware resources for the design of the scheme, which reduces the adaptability of the scheme in different application scenarios and makes it difficult to optimize the algorithms in the scheme. To address the above issues, this paper proposes a deep learning-based model for seizure detection, mainly characterized by the two-dimensional representation of EEG features and the scalability of neural networks. The model modularizes the main steps of seizure detection and improves the adaptability of the model to different hardware resource constraints, in order to increase the convenience of the algorithm optimization or the replacement of each module. The proposed model consists of five parts, and the model was tested using two epilepsy datasets separately. The experimental results showed that the proposed model has strong generality and good classification accuracy for seizure detection.
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11
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Zhang G, Yang L, Li B, Lu Y, Liu Q, Zhao W, Ren T, Zhou J, Wang SH, Che W. MNL-Network: A Multi-Scale Non-local Network for Epilepsy Detection From EEG Signals. Front Neurosci 2020; 14:870. [PMID: 33281538 PMCID: PMC7705239 DOI: 10.3389/fnins.2020.00870] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2020] [Accepted: 07/27/2020] [Indexed: 11/24/2022] Open
Abstract
Epilepsy is a prevalent neurological disorder that threatens human health in the world. The most commonly used method to detect epilepsy is using the electroencephalogram (EEG). However, epilepsy detection from the EEG is time-consuming and error-prone work because of the varying levels of experience we find in physicians. To tackle this challenge, in this paper, we propose a multi-scale non-local (MNL) network to achieve automatic EEG signal detection. Our MNL-Network is based on 1D convolution neural network involving two specific layers to improve the classification performance. One layer is named the signal pooling layer which incorporates three different sizes of 1D max-pooling layers to learn the multi-scale features from the EEG signal. The other one is called a multi-scale non-local layer, which calculates the correlation of different multi-scale extracted features and outputs the correlative encoded features to further enhance the classification performance. To evaluate the effectiveness of our model, we conduct experiments on the Bonn dataset. The experimental results demonstrate that our MNL-Network could achieve competitive results in the EEG classification task.
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Affiliation(s)
- Guokai Zhang
- School of Optical-Electrical and Computer Engineering, University of Shanghai for Science and Technology, Shanghai, China
| | - Le Yang
- School of Software Engineering, Tongji University, Shanghai, China
| | - Boyang Li
- School of Software Engineering, Tongji University, Shanghai, China
| | - Yiwen Lu
- Department of Computer Science and Technology, Tongji University, Shanghai, China
| | - Qinyuan Liu
- Department of Computer Science and Technology, Tongji University, Shanghai, China
| | - Wei Zhao
- Chengyi University College, Jimei University, Xiamen, China
| | - Tianhe Ren
- School of Informatics, Xiamen University, Xiamen, China
| | - Junsheng Zhou
- School of Informatics, Xiamen University, Xiamen, China
| | - Shui-Hua Wang
- School of Architecture Building and Civil Engineering, Loughborough University, Loughborough, United Kingdom
- School of Mathematics and Actuarial Science, University of Leicester, Leicester, United Kingdom
| | - Wenliang Che
- Department of Cardiology, Shanghai Tenth People's Hospital, Tongji University School of Medicine, Shanghai, China
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12
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Rocha PL, Barros AK, Silva WS, Sousa GC, Sousa P, da Silva AM. Classification of the interictal state with hypsarrhythmia from Zika Virus Congenital Syndrome and of the ictal state from epilepsy in childhood without hypsarrhythmia in EEGs using entropy measures. Comput Biol Med 2020; 126:104014. [DOI: 10.1016/j.compbiomed.2020.104014] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2020] [Revised: 09/16/2020] [Accepted: 09/17/2020] [Indexed: 10/23/2022]
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13
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Türk Ö, Özerdem MS. Epilepsy Detection by Using Scalogram Based Convolutional Neural Network from EEG Signals. Brain Sci 2019; 9:brainsci9050115. [PMID: 31109020 PMCID: PMC6562774 DOI: 10.3390/brainsci9050115] [Citation(s) in RCA: 63] [Impact Index Per Article: 12.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2019] [Revised: 05/15/2019] [Accepted: 05/17/2019] [Indexed: 11/16/2022] Open
Abstract
The studies implemented with Electroencephalogram (EEG) signals are progressing very rapidly and brain computer interfaces (BCI) and disease determinations are carried out at certain success rates thanks to new methods developed in this field. The effective use of these signals, especially in disease detection, is very important in terms of both time and cost. Currently, in general, EEG studies are used in addition to conventional methods as well as deep learning networks that have recently achieved great success. The most important reason for this is that in conventional methods, increasing classification accuracy is based on too many human efforts as EEG is being processed, obtaining the features is the most important step. This stage is based on both the time-consuming and the investigation of many feature methods. Therefore, there is a need for methods that do not require human effort in this area and can learn the features themselves. Based on that, two-dimensional (2D) frequency-time scalograms were obtained in this study by applying Continuous Wavelet Transform to EEG records containing five different classes. Convolutional Neural Network structure was used to learn the properties of these scalogram images and the classification performance of the structure was compared with the studies in the literature. In order to compare the performance of the proposed method, the data set of the University of Bonn was used. The data set consists of five EEG records containing healthy and epilepsy disease which are labeled as A, B, C, D, and E. In the study, A-E and B-E data sets were classified as 99.50%, A-D and B-D data sets were classified as 100% in binary classifications, A-D-E data sets were 99.00% in triple classification, A-C-D-E data sets were 90.50%, B-C-D-E data sets were 91.50% in quaternary classification, and A-B-C-D-E data sets were in the fifth class classification with an accuracy of 93.60%.
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Affiliation(s)
- Ömer Türk
- Department of Computer programming, Mardin Artuklu University, Mardin 47500, Turkey.
| | - Mehmet Siraç Özerdem
- Department of Electronics Engineering Dicle University, Diyarbakır 21100, Turkey.
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14
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Embedded Dimension and Time Series Length. Practical Influence on Permutation Entropy and Its Applications. ENTROPY 2019; 21:e21040385. [PMID: 33267099 PMCID: PMC7514869 DOI: 10.3390/e21040385] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/13/2019] [Revised: 04/03/2019] [Accepted: 04/08/2019] [Indexed: 11/29/2022]
Abstract
Permutation Entropy (PE) is a time series complexity measure commonly used in a variety of contexts, with medicine being the prime example. In its general form, it requires three input parameters for its calculation: time series length N, embedded dimension m, and embedded delay τ. Inappropriate choices of these parameters may potentially lead to incorrect interpretations. However, there are no specific guidelines for an optimal selection of N, m, or τ, only general recommendations such as N>>m!, τ=1, or m=3,…,7. This paper deals specifically with the study of the practical implications of N>>m!, since long time series are often not available, or non-stationary, and other preliminary results suggest that low N values do not necessarily invalidate PE usefulness. Our study analyses the PE variation as a function of the series length N and embedded dimension m in the context of a diverse experimental set, both synthetic (random, spikes, or logistic model time series) and real–world (climatology, seismic, financial, or biomedical time series), and the classification performance achieved with varying N and m. The results seem to indicate that shorter lengths than those suggested by N>>m! are sufficient for a stable PE calculation, and even very short time series can be robustly classified based on PE measurements before the stability point is reached. This may be due to the fact that there are forbidden patterns in chaotic time series, not all the patterns are equally informative, and differences among classes are already apparent at very short lengths.
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