Molecular Logic as a Means to Assess Therapeutic Antidotes

A rhodamine based dual chemosensor for Al3+ and Hg2+: Application in the construction of advanced logic gates

A rhodamine-based compound (RBO), which has been constructed from the reaction between N-(rhodamine-6G)lactam-ethylenediamine and 2,1,3-benzoxadiazole-4-carbaldehyde, is reported here as a selective chemosensor for both Al³⁺ and Hg²⁺ ions in 10 mM HEPES buffer in water:ethanol (1:9, pH = 7.4). Absorption intensity of RBO increases considerably at 528 nm with these cations. It shows fluorescence enhancement at 550 nm by 1140- and 524-fold in the presence of Al³⁺ and Hg²⁺, respectively. LOD has been determined as 6.54 and 16.0 nM for Al³⁺ and Hg²⁺, respectively. Quantum yield and lifetime of RBO enhances with these metal ions. Fluorescence intensity of Al-probe complex or Hg-probe complex is quenched in the presence of fluoride or sulfide ion, respectively, opening a path for the construction logic gates. DFT analysis has been used to understand the spectral transitions. We have constructed a systematic development from single to five inputs complex circuit, and for the first time a time dependent five input complex logic circuit is reported herein.

Development of dual enzyme responsive molecular AND logic gate

Molecular logic gates are information processing devices that can respond to environmental signals and produce a readable output in response through Boolean logic operations. Molecules with these properties have been used to build smart sensors and therapeutic agents. In this work, dual enzyme-responsive molecular AND logic gate is developed with the intention to discriminate various combinations of enzyme level and/or activity. A resorufin-based sensor is substituted with self-immolative tyrosinase recognition site, 3-hydroxy benzyl group. The Hydroxyl group is protected with acetyl moiety which decreases the affinity of the enzyme. When both tyrosinase and esterase are present in the solution, the acetyl group is removed by the latter enzyme, allowing the former to recognise the ligand. Oxidation of the ligand by tyrosinase triggers self-immolative cleavage of the substitution, leading to almost 70 fold enhancement in fluorescence. When single enzyme is applied, there is no significant change in the emission intensity overall, an AND logic gate is constructed. Selectivity and Michaelis-Menten kinetics of the sensor is analysed. Smart molecular probes can contribute to the research on the development of biosensors that can discriminate diseases having characteristic combinations of enzyme activities.

A therapeutic keypad lock decoded in drug resistant cancer cells

A molecular keypad lock that displays photodynamic activity when exposed to glutathione (GSH), esterase and light in the given order, is fabricated and its efficacy in drug resistant MCF7 cancer cells is investigated. The first two inputs are common drug resistant tumor markers. GSH reacts with the agent and shifts the absorption wavelength. Esterase separates the quencher from the structure, further activating the agent. After these sequential exposures, the molecular keypad lock is exposed to light and produces cytotoxic singlet oxygen. Among many possible combinations, only one 'key' can activate the agent, and initiate a photodynamic response. Paclitaxel resistant MCF7 cells are selectively killed. This work presents the first ever biological application of small molecular keypad locks.

Elucidating sensing mechanisms of a pyrene excimer-based calix[4]arene for ratiometric detection of Hg(ii) and Ag(i) and chemosensor behaviour as INHIBITION or IMPLICATION logic gates

This article reports the synthesis and characterisation of two lower rim calix[4]arene derivatives with thiourea as spacer and pyrene or methylene-pyrene as fluorophore. Both derivatives exhibit a fluorimetric response towards Hg²⁺, Ag⁺ and Cu²⁺. Only methylene-pyrenyl derivative 2 allows for selective detection of Hg²⁺ and Ag⁺ by enhancement or decrease of excimer emission, respectively. The limits of detection of 2 are 8.11 nM (Hg²⁺) and 2.09 nM (Ag⁺). DFT and TD-DFT computational studies were carried out and used to identify possible binding modes that explain the observed response during fluorescence titrations. Calculations revealed the presence of different binding sites depending on the conformation of 2, which suggest a reasonable explanation for non-linear changes in fluorescence depending on the physical nature of the interaction between metal centre and conformer. INHIBITION and IMPLICATION logic gates have also been generated monitoring signal outputs at pyrene monomer (395 nm) and excimer (472 nm) emission, respectively. Thus 2 is a potential primary sensor towards Ag⁺ and Hg²⁺ able to configure two different logic gate operations.