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Timurkan MO, Guven E, Cengiz S, Aydın H, Kirman R, Avcioglu H. Investigation of Viral, Bacterial and Parasitic Zoonotic Diseases in Rodents in Turkey. Vet Med Sci 2024; 10:e70068. [PMID: 39427325 PMCID: PMC11491072 DOI: 10.1002/vms3.70068] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/26/2023] [Revised: 05/02/2024] [Accepted: 09/20/2024] [Indexed: 10/22/2024] Open
Abstract
BACKGROUND Rodents are reservoir hosts for zoonotic pathogens that cause tropical diseases, many of which have been overlooked. OBJECTIVES The aim of this study was to investigate the presence of viral lymphocytic choriomeningitis and hantavirus infections, bacterial tularaemia and leptospirosis, and parasitic leishmaniasis and toxoplasmosis in rodents that are likely to carry and spread zoonotic agents, by using molecular methods. METHODS A total of 498 voles collected from 20 counties of Erzurum province. Conventional PCR was used for pathogen search. PCR-positive samples were subjected to sequence analysis. RESULTS Hantavirus (4.8%, 24/498) and tularaemia (0.8%, 4/498) positivity were detected. However, no positivity was detected for other selected pathogens. CONCLUSIONS Rodents, which are pathogen carriers and potential risk factors, are thought to may act as reservoirs for hantavirus and tularaemia in the study area. A preliminary study has been carried out at the point of detection of these diseases of global importance. The extent of the distribution of the infections, alternative hosts and the consequences of human exposure needs to be clarified through further studies.
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Affiliation(s)
- Mehmet Ozkan Timurkan
- Department of VirologyFaculty of Veterinary Medicine, Atatürk UniversityErzurumTurkey
| | - Esin Guven
- Department of ParasitologyFaculty of Veterinary Medicine, Atatürk UniversityErzurumTurkey
| | - Seyda Cengiz
- Department of MicrobiologyFaculty of Veterinary Medicine, Muğla Sıtkı Koçman UniversityMuğlaTurkey
| | - Hakan Aydın
- Department of VirologyFaculty of Veterinary Medicine, Atatürk UniversityErzurumTurkey
| | - Ridvan Kirman
- Department of ParasitologyFaculty of Veterinary Medicine, Atatürk UniversityErzurumTurkey
| | - Hamza Avcioglu
- Department of ParasitologyFaculty of Veterinary Medicine, Atatürk UniversityErzurumTurkey
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Mostafavi E, Mohammadpour R, Esmaeili S, Mahmoudi A, Salehi-Vaziri M, Ghasemi A, Rohani M, Mohammadi A, Eybpoosh S, Baseri N, Denys C, Maurin M, Nicolas V, Lalis A, Hugot JP. The Epidemiological Investigation of Yersinia pestis, Francisella tularensis, and Arenavirus Infections in Small Mammals in Northwestern Iran. Vector Borne Zoonotic Dis 2024; 24:489-498. [PMID: 38775074 DOI: 10.1089/vbz.2023.0089] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/10/2024] Open
Abstract
Background: The control and prevention of rodent-borne diseases are mainly based on our knowledge of ecology and the infectious status of their reservoir hosts. This study aimed to evaluate the prevalence of Francisella tularensis, Yersinia pestis, and arenavirus infections in small mammals and to assess the potential of disease occurrence in East Azerbaijan, northwest of Iran, in 2017 and 2018. Methods: Spleen and lung samples were obtained from all trapped small mammals. The real-time quantitative PCR (qPCR) method was used to detect nucleic acid sequences of F. tularensis, Y. pestis, and arenaviruses. Serum samples were tested for antibodies indicating the host response to F. tularensis and Y. pestis infections using the standard tube agglutination test and enzyme-linked immunosorbent assay (ELISA), respectively. Results: A total of 205 rodents, four Eulipotyphla, and one carnivore were captured. The most common rodent species captured (123 of 205 rodents, 60%) belonged to the genus Meriones (mainly Persian jird, Meriones persicus). In total, 317 fleas were removed from trapped animals. Flea species belonged to Xenopsylla buxtoni, Xenopsylla nuttalli, Stenoponia tripectinata, Paraceras melis, Ctenophthalmus rettigi smiti, Rhadinopsylla bivirgis, Paradoxopsyllus grenieri, and Nosopsyllus iranus. Using the qPCR tests, five spleen samples from M. persicus were positive for F. tularensis. The qPCR tests were negative for the detection of Y. pestis and arenaviruses. Finally, all serum samples tested were negative for antibodies against Y. pestis and F. tularensis. Conclusions: F. tularensis was the only zoonotic agent detected in rodents captured in East Azerbaijan. However, the diversity of trapped rodents and fleas provides the potential for the spread of various rodent-borne viral and bacterial diseases in the studied areas.
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Affiliation(s)
- Ehsan Mostafavi
- National Reference Laboratory of Plague, Tularemia and Q Fever, Research Centre for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Tehran, Iran
- Department of Epidemiology and Biostatistics, Research Centre for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Tehran, Iran
| | - Roya Mohammadpour
- National Reference Laboratory of Plague, Tularemia and Q Fever, Research Centre for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Tehran, Iran
- Department of Epidemiology and Biostatistics, Research Centre for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Tehran, Iran
| | - Saber Esmaeili
- National Reference Laboratory of Plague, Tularemia and Q Fever, Research Centre for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Tehran, Iran
- Department of Epidemiology and Biostatistics, Research Centre for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Tehran, Iran
| | - Ahmad Mahmoudi
- Department of Biology, Faculty of Science, Urmia University, Urmia, Iran
| | - Mostafa Salehi-Vaziri
- Department of Arboviruses and Viral Hemorrhagic Fevers (National Reference Laboratory), Pasteur Institute of Iran, Tehran, Iran
| | - Ahmad Ghasemi
- Department of Microbiology, Research Center of Reference Health Laboratory, Ministry of Health and Medical Education, Tehran, Iran
| | - Mahdi Rohani
- National Reference Laboratory of Plague, Tularemia and Q Fever, Research Centre for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Tehran, Iran
- Department of Microbiology, Pasteur Institute of Iran, Tehran, Iran
| | - Ali Mohammadi
- National Reference Laboratory of Plague, Tularemia and Q Fever, Research Centre for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Tehran, Iran
- Department of Epidemiology and Biostatistics, Research Centre for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Tehran, Iran
| | - Sana Eybpoosh
- Department of Epidemiology and Biostatistics, Research Centre for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Tehran, Iran
| | - Neda Baseri
- Department of Bacteriology, Faculty of Medical Sciences, Tarbiat Modares University, Tehran, Iran
| | - Christiane Denys
- Institut de Sytématique, Evolution et Biodiversité (ISYEB), Muséum National d'Histoire Naturelle, CNRS, Sorbonne Université, EPHE-PSL, Université des Antilles, Paris, France
| | - Max Maurin
- Centre National de Référence Francisella tularensis, Institut de Biologie et Pathologie, Centre Hospitalier Universitaire Grenoble Alpes, Université Grenoble Alpes, Grenoble, France
| | - Violaine Nicolas
- Institut de Sytématique, Evolution et Biodiversité (ISYEB), Muséum National d'Histoire Naturelle, CNRS, Sorbonne Université, EPHE-PSL, Université des Antilles, Paris, France
| | - Aude Lalis
- Institut de Sytématique, Evolution et Biodiversité (ISYEB), Muséum National d'Histoire Naturelle, CNRS, Sorbonne Université, EPHE-PSL, Université des Antilles, Paris, France
| | - Jean-Pierre Hugot
- Institut de Sytématique, Evolution et Biodiversité (ISYEB), Muséum National d'Histoire Naturelle, CNRS, Sorbonne Université, EPHE-PSL, Université des Antilles, Paris, France
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Sholeh M, Moradkasani S, Esmaeili S. Epidemiology of tularemia in the countries of the WHO Eastern Mediterranean Region (EMRO): A systematic review and meta-analysis. PLoS Negl Trop Dis 2024; 18:e0012141. [PMID: 38728365 PMCID: PMC11086863 DOI: 10.1371/journal.pntd.0012141] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2023] [Accepted: 04/08/2024] [Indexed: 05/12/2024] Open
Abstract
BACKGROUND Francisella tularensis, the bacterium that causes tularemia, has been a persistent and widespread pathogen in various regions of the world for centuries. Francisella tularensis can affect humans and various domestic and wild animals. The current study aimed to determine the epidemiological status of tularemia in countries of the WHO Eastern Mediterranean Region (EMRO) through a systematic review and meta-analysis. METHODS All included studies were identified through a systematic search of online databases, including Scopus, PubMed, Web of Science, and EMBASE, through July 26, 2022, using keywords and suitable combinations. We focused on cross-sectional studies investigating the prevalence of F. tularensis. The weighted pooled prevalence was calculated using a random-effects model. RESULTS A total of 206 studies were identified, of which 20 were finally included in the analysis. The human seroprevalence of tularemia in WHO-EMRO countries was 6.2% (95% CI, 4.2 9.2). In the subgroup analysis, anti-F. tularensis antibodies were found in 6.92% and 5.5% of the high-risk individuals and Iran, respectively. The pooled prevalence of F. tularensis in environmental samples (water and soil) from the WHO-EMRO countries was 5.8% (9.4% by PCR and 0.5% by culture). In addition, 2.5% (95% CI, 0.2 0.22.7) of ticks in WHO-EMRO countries were positive for F. tularensis. The pooled prevalence of F. tularensis in rodents is 2.0% (1.1% by PCR and 3.7% by serology). In addition, 0.6% of domestic ruminants (0.4% by PCR and 2.4% by serology) were positive for F. tularensis in WHO-EMRO countries. CONCLUSION According to the results of the present study, tularemia is an endemic but neglected disease in the WHO-EMRO region. However, most studies on tularemia are limited to a few countries in this region. Studies on tularemia in human populations, reservoirs, and vectors have been conducted in all countries in the WHO-EMRO region to obtain more detailed information about the epidemiology of tularemia in these regions.
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Affiliation(s)
- Mohammad Sholeh
- Department of Bacteriology, Pasteur Institute of Iran, Tehran, Iran
| | - Safoura Moradkasani
- Department of Epidemiology and Biostatistics, Research Center for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Tehran, Iran
| | - Saber Esmaeili
- Department of Epidemiology and Biostatistics, Research Center for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Tehran, Iran
- National Reference Laboratory for Plague, Tularemia and Q Fever, Research Centre for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Akanlu, KabudarAhang, Hamadan, Iran
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Sarani S, Enferadi A, Hasani SJ, Sarani MY, Rahnama M, Sarani F. Identification of zoonotic pathogenic bacteria from blood and ticks obtained from hares and long-eared hedgehogs (Hemiechinus megalofis) in eastern Iran. Comp Immunol Microbiol Infect Dis 2024; 104:102097. [PMID: 38029723 DOI: 10.1016/j.cimid.2023.102097] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2023] [Revised: 11/02/2023] [Accepted: 11/13/2023] [Indexed: 12/01/2023]
Abstract
The role of wildlife in the complex balance of tick-borne diseases within ecosystems is crucial, as they serve as hosts for tick carriers and reservoirs for the pathogens carried by these ticks. This study aimed to investigate the presence of zoonotic pathogenic bacteria in wildlife, specifically in hares and long-eared hedgehogs (Hemiechinus megalofis), in the eastern region of Iran. The focus was on the detection of Borrelia spp., Coxiella burnetii, Anaplasma spp., Francisella spp., and Leptospira spp., using the Nested-PCR method. We analyzed a total of 124 blood samples, and 196 ticks collected from hares and long-eared hedgehogs were analyzed. The Nested-PCR method was employed to identify the presence of zoonotic pathogenic bacteria DNA. Our study revealed the presence of these zoonotic pathogenic bacteria in both wildlife species, indicating their potential role as hosts and reservoirs for the ticks carrying these pathogens. The specific presence and prevalence of Borrelia spp., Coxiella burnetii, Anaplasma spp., Francisella spp., and Leptospira spp. were determined through the Nested-PCR method. This study contributes to the limited knowledge about the involvement of wild animals in the transmission of tick-borne diseases. By using the Nested-PCR method, we successfully identified the presence of zoonotic pathogenic bacteria in hares and long-eared hedgehogs. This study emphasizes the need for further research to better understand the ecological process of tick-borne diseases, particularly the role of wildlife in their spread. Such knowledge is crucial for wildlife conservation efforts and the management of tick-borne diseases, ultimately benefiting both animal and human health.
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Affiliation(s)
- Saeedeh Sarani
- Department of Pathology, Faculty of Veterinary Medicine, Zabol University, Iran
| | - Ahmad Enferadi
- Department of Microbiology, Faculty of Veterinary Medicine, Urmia University, Iran.
| | - Sayyed Jafar Hasani
- Department of Microbiology, Faculty of Veterinary Medicine, Urmia University, Iran
| | | | - Mohammad Rahnama
- Department of Pathology, Faculty of Veterinary Medicine, Zabol University, Iran
| | - Faroogh Sarani
- Department of Pathology, Faculty of Veterinary Medicine, Zabol University, Iran
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Esmaeili S, Latifian M, Mahmoudi A, Ghasemi A, Mohammadi A, Mordadi A, Ziapour SP, Naddaf SR, Mostafavi E. Molecular investigation of Coxiella burnetii and Francisella tularensis infection in ticks in northern, western, and northwestern Iran. PLoS One 2023; 18:e0289567. [PMID: 37590254 PMCID: PMC10434890 DOI: 10.1371/journal.pone.0289567] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2023] [Accepted: 07/20/2023] [Indexed: 08/19/2023] Open
Abstract
Tularemia and Q fever are endemic diseases in Iran; however, little information is available on the prevalence of the causative agents, Coxiella burnetii and Francisella tularensis, in Iranian ticks. This study investigated C. burnetii and F. tularensis among hard ticks in this country. We collected ticks from livestock and other mammals in Guilan, Mazandaran, Golestan (northern Iran), Kurdistan (western Iran), and West Azerbaijan (northwestern Iran) provinces. Genomic DNA from collected ticks was extracted and screened for C. burnetii and F. tularensis using Real-time PCR. A total of 4,197 ticks (belonging to 12 different species) were collected, and Ixodes ricinus (46.4%), Rhipicephalus turanicus (25%), and Rhipicephalus sanguineus sensu lato (19.1%) were the most collected species. Of 708 pooled tick samples, 11.3% and 7.20% were positive for C. burnetii and F. tularensis, respectively. The genus of Rhipicephalus had the highest (18.3%) C. burnetii infection among the collected tick pools (P<0.001). Furthermore, the most positive pools for F. tularensis belonged to Haemaphysalis spp. (44.4%). Kurdistan had the most significant percentage of C. burnetii-infected ticks (92.5%), and there was a meaningful relationship between the provinces and the infection (P< 0.001). The ticks from Golestan exhibited the highest F. tularensis infection rate (10. 9%), and the infection showed no significant relationship with the provinces (P = 0.19). Ticks collected from grasslands had a higher Coxiella burnetii infection rate than those collected from animals (39.4% vs. 7.9%; p<0.01). However, ticks collected from animal surfaces had a slightly higher rate of Francisella tularensis infection than those collected from grasslands (7.6% vs. 3.9%; p = 0.24). Here, we demonstrated the presence of both pathogens in the north (Guilan, Mazandaran, and Golestan provinces), the west (Kurdistan province), and the northwest (West Azerbaijan province) of Iran. The public health system should pay particular attention to tick bites in veterinary medicine and humans.
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Affiliation(s)
- Saber Esmaeili
- National Reference Laboratory for Plague, Tularemia and Q Fever, Research Centre for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Akanlu, KabudarAhang, Hamadan, Iran
- Department of Epidemiology and Biostatics, Research Centre for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Tehran, Iran
| | - Mina Latifian
- National Reference Laboratory for Plague, Tularemia and Q Fever, Research Centre for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Akanlu, KabudarAhang, Hamadan, Iran
- Department of Epidemiology and Biostatics, Research Centre for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Tehran, Iran
| | - Ahmad Mahmoudi
- Department of Biology, Faculty of Science, Urmia University, Urmia, Iran
| | - Ahmad Ghasemi
- National Reference Laboratory for Plague, Tularemia and Q Fever, Research Centre for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Akanlu, KabudarAhang, Hamadan, Iran
- Department of Microbiology, Research Center of Reference Health Laboratories, Ministry of Health and Medical Education, Tehran, Iran
| | - Ali Mohammadi
- Department of Epidemiology and Biostatics, Research Centre for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Tehran, Iran
- Department of Medical Entomology and Vector Control, School of Public Health and National Institute of Health Research, Tehran University of Medical Sciences, Tehran, Iran
| | - Alireza Mordadi
- Department of Epidemiology and Biostatics, Research Centre for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Tehran, Iran
| | - Seyyed Payman Ziapour
- Department of Parasitology, Zoonoses, Research Center, Pasteur Institute of Iran, Amol, Mazandaran, Iran
| | | | - Ehsan Mostafavi
- National Reference Laboratory for Plague, Tularemia and Q Fever, Research Centre for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Akanlu, KabudarAhang, Hamadan, Iran
- Department of Epidemiology and Biostatics, Research Centre for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Tehran, Iran
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Cordonin C, Gomard Y, Monadjem A, Schoeman MC, Le Minter G, Lagadec E, Gudo ES, Goodman SM, Dellagi K, Mavingui P, Tortosa P. Ancestral African Bats Brought Their Cargo of Pathogenic Leptospira to Madagascar under Cover of Colonization Events. Pathogens 2023; 12:859. [PMID: 37513706 PMCID: PMC10385254 DOI: 10.3390/pathogens12070859] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2023] [Revised: 06/06/2023] [Accepted: 06/16/2023] [Indexed: 07/30/2023] Open
Abstract
Madagascar is home to an extraordinary diversity of endemic mammals hosting several zoonotic pathogens. Although the African origin of Malagasy mammals has been addressed for a number of volant and terrestrial taxa, the origin of their hosted zoonotic pathogens is currently unknown. Using bats and Leptospira infections as a model system, we tested whether Malagasy mammal hosts acquired these infections on the island following colonization events, or alternatively brought these bacteria from continental Africa. We first described the genetic diversity of pathogenic Leptospira infecting bats from Mozambique and then tested through analyses of molecular variance (AMOVA) whether the genetic diversity of Leptospira hosted by bats from Mozambique, Madagascar and Comoros is structured by geography or by their host phylogeny. This study reveals a wide diversity of Leptospira lineages shed by bats from Mozambique. AMOVA strongly supports that the diversity of Leptospira sequences obtained from bats sampled in Mozambique, Madagascar, and Comoros is structured according to bat phylogeny. Presented data show that a number of Leptospira lineages detected in bat congeners from continental Africa and Madagascar are imbedded within monophyletic clades, strongly suggesting that bat colonists have indeed originally crossed the Mozambique Channel while infected with pathogenic Leptospira.
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Affiliation(s)
- Colette Cordonin
- Unité Mixte de Recherche PIMIT "Processus Infectieux en Milieu Insulaire Tropical", Centre National de la Recherche Scientifique 9192, Institut National de la Santé Et de la Recherche Médicale 1187, Institut de Recherche pour le Développement 249, Université de La Réunion, Plateforme de Recherche CYROI, 97490 Sainte Clotilde, Réunion
| | - Yann Gomard
- Unité Mixte de Recherche PIMIT "Processus Infectieux en Milieu Insulaire Tropical", Centre National de la Recherche Scientifique 9192, Institut National de la Santé Et de la Recherche Médicale 1187, Institut de Recherche pour le Développement 249, Université de La Réunion, Plateforme de Recherche CYROI, 97490 Sainte Clotilde, Réunion
| | - Ara Monadjem
- Department of Biological Sciences, University of Eswatini, Private Bag 4, Kwaluseni M202, Eswatini
- Department of Zoology and Entomology, Mammal Research Institute, University of Pretoria, Private Bag 20, Hatfield 0028, South Africa
| | - M Corrie Schoeman
- School of Life Sciences, University of KwaZulu-Natal, Durban 4000, South Africa
| | - Gildas Le Minter
- Unité Mixte de Recherche PIMIT "Processus Infectieux en Milieu Insulaire Tropical", Centre National de la Recherche Scientifique 9192, Institut National de la Santé Et de la Recherche Médicale 1187, Institut de Recherche pour le Développement 249, Université de La Réunion, Plateforme de Recherche CYROI, 97490 Sainte Clotilde, Réunion
| | - Erwan Lagadec
- Unité Mixte de Recherche PIMIT "Processus Infectieux en Milieu Insulaire Tropical", Centre National de la Recherche Scientifique 9192, Institut National de la Santé Et de la Recherche Médicale 1187, Institut de Recherche pour le Développement 249, Université de La Réunion, Plateforme de Recherche CYROI, 97490 Sainte Clotilde, Réunion
| | | | - Steven M Goodman
- Negaunee Integrative Research Center, Field Museum of Natural History, Chicago, IL 60605, USA
- Association Vahatra, BP 3972, Antananarivo 101, Madagascar
| | - Koussay Dellagi
- Unité Mixte de Recherche PIMIT "Processus Infectieux en Milieu Insulaire Tropical", Centre National de la Recherche Scientifique 9192, Institut National de la Santé Et de la Recherche Médicale 1187, Institut de Recherche pour le Développement 249, Université de La Réunion, Plateforme de Recherche CYROI, 97490 Sainte Clotilde, Réunion
| | - Patrick Mavingui
- Unité Mixte de Recherche PIMIT "Processus Infectieux en Milieu Insulaire Tropical", Centre National de la Recherche Scientifique 9192, Institut National de la Santé Et de la Recherche Médicale 1187, Institut de Recherche pour le Développement 249, Université de La Réunion, Plateforme de Recherche CYROI, 97490 Sainte Clotilde, Réunion
| | - Pablo Tortosa
- Unité Mixte de Recherche PIMIT "Processus Infectieux en Milieu Insulaire Tropical", Centre National de la Recherche Scientifique 9192, Institut National de la Santé Et de la Recherche Médicale 1187, Institut de Recherche pour le Développement 249, Université de La Réunion, Plateforme de Recherche CYROI, 97490 Sainte Clotilde, Réunion
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Francisella and tularemia in western Asia, Iran: a systematic review. New Microbes New Infect 2023; 52:101092. [PMID: 36816490 PMCID: PMC9932182 DOI: 10.1016/j.nmni.2023.101092] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2022] [Revised: 01/20/2023] [Accepted: 01/23/2023] [Indexed: 01/29/2023] Open
Abstract
Tularemia or rabbit fever is a transmissible disease from animals, rodents, and insects to human populations that is caused by Francisella tularensis. Epidemiological studies showed that tularemia is endemic throughout most different regions of the world. Recent evidence documented the transmission of the F. tularensis in a different part of Asia. Because there is no updated review information for tularemia in Iran, we performed this systematic review. In this study, we systematically explored biomedical databases (Google Scholar, Scopus, PubMed, and Web of sciences) to identify epidemiology, reservoirs, and carriers of Francisella in animal and human clinical specimens from 2010 to 2020, either in English or in Persian. Different studies have shown the different frequencies of F. tularensis among human and animal resources in eighteen provinces of Iran. In total, 1242 human clinical specimens, 1565 animal samples, and 355 environmental water samples were investigated to find F. tularensis in different provinces of Iran. According to the collected documents, 94 human clinical samples, 69 water samples, and 26 animal specimens were introduced as positive samples for the F. tularensis. According to studies, thirteen species of rodent and hare presented as an inter-epizootic reservoir. Only one species of tick (D. marginatus) was introduced as a vector for Francisella in Iran. According to these results, it is essential for exclusive attention to the prevalence of F. tularensis in different provinces of Iran. Furthermore, special planning should be done for prevention, control of the outbreak, and proper treatment of the tularemia.
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Esmaeili S, Ghasemi A, Esmaeili P, Rezaie F, Mohraz M, Maurin M, Mostafavi E. A case report of ulceroglandular tularemia caused by Francisella tularensis subsp. holarctica in Iran. Acta Trop 2022; 234:106570. [PMID: 35752204 DOI: 10.1016/j.actatropica.2022.106570] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2022] [Revised: 06/19/2022] [Accepted: 06/21/2022] [Indexed: 11/01/2022]
Abstract
BACKGROUND Tularemia is a zoonotic disease that has been reported in many countries of the Northern Hemisphere. However, in some countries, such as Iran, this disease has been neglected by the health care system, and it is under-reported. CASE PRESENTATION Here we report an unusual case of ulceroglandular tularemia occurring in a 35-year-old woman who presented with a skin lesion of the left flank, inguinal lymphadenopathy, and an abdominal abscess. The serological and real-time PCR tests for tularemia were positive for this patient, and infection by Francisella tularensis subsp. holarctica was confirmed. CONCLUSIONS It is necessary to implement various educational programs to increase the awareness of physicians with tularemia.
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Affiliation(s)
- Saber Esmaeili
- National Reference Laboratory for Plague, Tularemia and Q fever, Research Centre for Emerging and Reemerging infectious diseases, Pasteur Institute of Iran, Akanlu, Kabudar Ahang, Hamadan, Iran; Department of Epidemiology and Biostatistics, Research Centre for Emerging and Reemerging infectious diseases, Pasteur Institute of Iran, Tehran, Iran
| | - Ahmad Ghasemi
- National Reference Laboratory for Plague, Tularemia and Q fever, Research Centre for Emerging and Reemerging infectious diseases, Pasteur Institute of Iran, Akanlu, Kabudar Ahang, Hamadan, Iran; Department of Epidemiology and Biostatistics, Research Centre for Emerging and Reemerging infectious diseases, Pasteur Institute of Iran, Tehran, Iran
| | - Parisa Esmaeili
- National Reference Laboratory for Plague, Tularemia and Q fever, Research Centre for Emerging and Reemerging infectious diseases, Pasteur Institute of Iran, Akanlu, Kabudar Ahang, Hamadan, Iran; Department of Epidemiology and Biostatistics, Research Centre for Emerging and Reemerging infectious diseases, Pasteur Institute of Iran, Tehran, Iran
| | - Farshid Rezaie
- Center for Communicable Disease Control, Ministry of Health and Medical Education, Tehran, Iran
| | - Minoo Mohraz
- Iranian Research Center for HIV/AIDS, Iranian Institute for Reduction of High-Risk Behaviors, Tehran University of Medical Sciences, Tehran, Iran
| | - Max Maurin
- Universite Grenoble Alpes, CNRS, Grenoble INP, CHU Grenoble Alpes, TIMC-IMAG, 38000 Grenoble, Grenoble, France
| | - Ehsan Mostafavi
- National Reference Laboratory for Plague, Tularemia and Q fever, Research Centre for Emerging and Reemerging infectious diseases, Pasteur Institute of Iran, Akanlu, Kabudar Ahang, Hamadan, Iran; Department of Epidemiology and Biostatistics, Research Centre for Emerging and Reemerging infectious diseases, Pasteur Institute of Iran, Tehran, Iran.
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Zhang Y, Wang Z, Wang W, Yu H, Jin M. Applications of polymerase chain reaction‑based methods for the diagnosis of plague (Review). Exp Ther Med 2022; 24:511. [DOI: 10.3892/etm.2022.11438] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2022] [Accepted: 04/22/2022] [Indexed: 11/05/2022] Open
Affiliation(s)
- Yanan Zhang
- Inner Mongolia Key Laboratory of Disease‑Related Biomarkers, Baotou Medical College, Baotou, Inner Mongolia 014060, P.R. China
| | - Zhanli Wang
- Inner Mongolia Key Laboratory of Disease‑Related Biomarkers, Baotou Medical College, Baotou, Inner Mongolia 014060, P.R. China
| | - Wenrui Wang
- General Center for Disease Control and Prevention of Inner Mongolia Autonomous Region, Huhehot, Inner Mongolia 010031, P.R. China
| | - Hui Yu
- Inner Mongolia Key Laboratory of Disease‑Related Biomarkers, Baotou Medical College, Baotou, Inner Mongolia 014060, P.R. China
| | - Min Jin
- Inner Mongolia Key Laboratory of Disease‑Related Biomarkers, Baotou Medical College, Baotou, Inner Mongolia 014060, P.R. China
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10
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Aghamohammad S, Cohan HA, Ghasemi A, Mostafavi E, Rohani M. The monitoring of Francisella tularensis in surface water of East Azerbaijan province, Iran. Comp Immunol Microbiol Infect Dis 2022; 81:101744. [PMID: 35030532 DOI: 10.1016/j.cimid.2022.101744] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2021] [Revised: 12/26/2021] [Accepted: 01/04/2022] [Indexed: 11/29/2022]
Abstract
BACKGROUND Francisella tularensis could be disseminated through arthropod bites and exposure to infected animals, water, and aerosols. Water sources that are contaminated with rodent excrement could be a source of contamination; therefore, an analysis of water samples is an appropriate method to investigate the routes of dissemination. Since an outbreak occurred in one of the villages in East Azerbaijan. The current study aimed to investigate the Francisella isolation in the different water samples from East Azerbaijan, Iran. Sampling was carried out in East Azerbaijan province. Forty-six specimens of surface water were collected. Filtration, culture, and inoculation of the water sample into NMRI (Naval Medical Research Institute) inbreed mice were performed. DNA was extracted from filtered water samples, different organs of inoculated mice, and bacterial isolates and was tested by TaqMan real-time PCR by targeting ISFtu2 and fopA genes. Despite the unsuccessfulness in isolation of F. tularensis, molecular test results indicate the presence of bacteria in surface water. The highest rate of F. tularensis (ten from 46 water samples, 21.7%) was detected from injected mice based on molecular methods. Despite the high efforts of researchers to isolate Francisella spp. in Iran, in recent years, and also the evidence that shows the presence of this bacterium in different parts of the country, the culture was not successful again in this study and the molecular method still is recommended to identify the possible sources of Francisella spp.
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Affiliation(s)
| | - Hossein Ahangari Cohan
- National Reference Laboratory for Plague, Tularemia and Q fever, Research Centre for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Akanlu, Kabudar, Ahang, Hamadan, Iran; Department of Epidemiology and Biostatics, Research Centre for Emerging and Reemerging infectious diseases, Pasteur Institute of Iran, Tehran, Iran
| | - Ahmad Ghasemi
- National Reference Laboratory for Plague, Tularemia and Q fever, Research Centre for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Akanlu, Kabudar, Ahang, Hamadan, Iran; Department of Epidemiology and Biostatics, Research Centre for Emerging and Reemerging infectious diseases, Pasteur Institute of Iran, Tehran, Iran
| | - Ehsan Mostafavi
- National Reference Laboratory for Plague, Tularemia and Q fever, Research Centre for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Akanlu, Kabudar, Ahang, Hamadan, Iran; Department of Epidemiology and Biostatics, Research Centre for Emerging and Reemerging infectious diseases, Pasteur Institute of Iran, Tehran, Iran
| | - Mahdi Rohani
- Department of Microbiology, Pasteur Institute of Iran, Tehran, Iran.
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11
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Schlater SM, Ringenberg JM, Bickford N, Ranglack DH. WHITE-TAILED JACKRABBITS: A REVIEW AND CALL FOR RESEARCH. SOUTHWEST NAT 2021. [DOI: 10.1894/0038-4909-65.2.161] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Affiliation(s)
- Shannon M. Schlater
- University of Nebraska at Kearney, 2401 11th Avenue, Kearney, NE 68849 (SMS, JMR, NB, DHR)
| | - Jourdan M. Ringenberg
- University of Nebraska at Kearney, 2401 11th Avenue, Kearney, NE 68849 (SMS, JMR, NB, DHR)
| | - Nate Bickford
- University of Nebraska at Kearney, 2401 11th Avenue, Kearney, NE 68849 (SMS, JMR, NB, DHR)
| | - Dustin H. Ranglack
- University of Nebraska at Kearney, 2401 11th Avenue, Kearney, NE 68849 (SMS, JMR, NB, DHR)
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12
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Singh R, Pal V, Kumar M, Tripathi NK, Goel AK. Development of a PCR-lateral flow assay for rapid detection of Yersinia pestis, the causative agent of plague. Acta Trop 2021; 220:105958. [PMID: 34004173 DOI: 10.1016/j.actatropica.2021.105958] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2021] [Revised: 05/06/2021] [Accepted: 05/07/2021] [Indexed: 11/18/2022]
Abstract
Plague is a zoonotic disease caused by Yersinia pestis, a Gram-negative, rod shaped coccobacillus, which is primarily found in rodents and can be transmitted to humans through flea bite. The disease has three major clinical forms bubonic (by flea bite), pneumonic (by respiratory droplets) and septicemic plague. Y. pestis is classified as a category 'A' agent by NIAID, USA due to its high mortality and easy person to person dissemination. The conventional diagnostic methods available for Y. pestis show cross-reactivity with other enteropathogenic bacteria making its detection difficult. There is a need to develop sensitive and specific molecular assay for accurate detection of Y. pestis. PCR is well suited molecular biology tool for rapid diagnosis of plague but after completion of thermal cycling steps, it requires additional time to analyze amplified product using agarose gel electrophoresis. In the present study, PCR assay coupled with lateral flow strips has been developed for rapid detection of Y. pestis. Lateral flow strips give an alternative to gel electrophoresis and permit easy and rapid detection of PCR products. The PCR was performed with 5' 6-FAM and biotin tagged primers specific for Y. pestis, targeting yihN gene located on chromosome. The PCR product was analyzed using lateral flow strips which yielded result within 2-3 minutes. The analytical sensitivity of PCR-lateral flow (PCR-LF) assay was 1 pg genomic DNA of Y. pestis and 500 copies of target DNA sequence harboured in a recombinant plasmid. The assay could detect Y. pestis DNA extracted from spiked human blood samples containing ≥104 CFU per mL of bacteria. The assay was found to be specific and did not cross react with other closely related bacterial species. The developed assay was highly specific, sensitive and also did not require agarose gel electrophoresis for post amplification analysis.
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Affiliation(s)
- Rita Singh
- Bioprocess Technology Division, Defence Research and Development Establishment, Jhansi Road, Gwalior 474002, India
| | - Vijai Pal
- Bioprocess Technology Division, Defence Research and Development Establishment, Jhansi Road, Gwalior 474002, India.
| | - Manoj Kumar
- Bioprocess Technology Division, Defence Research and Development Establishment, Jhansi Road, Gwalior 474002, India
| | - N K Tripathi
- Bioprocess Technology Division, Defence Research and Development Establishment, Jhansi Road, Gwalior 474002, India
| | - A K Goel
- Bioprocess Technology Division, Defence Research and Development Establishment, Jhansi Road, Gwalior 474002, India
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13
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Hannah EE, Pandit SG, Hau D, DeMers HL, Robichaux K, Nualnoi T, Dissanayaka A, Arias-Umana J, Green HR, Thorkildson P, Pflughoeft KJ, Gates-Hollingsworth MA, Ozsurekci Y, AuCoin DP. Development of Immunoassays for Detection of Francisella tularensis Lipopolysaccharide in Tularemia Patient Samples. Pathogens 2021; 10:pathogens10080924. [PMID: 34451388 PMCID: PMC8401977 DOI: 10.3390/pathogens10080924] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2021] [Revised: 07/16/2021] [Accepted: 07/20/2021] [Indexed: 11/16/2022] Open
Abstract
Francisella tularensis is the causative agent of tularemia, a zoonotic bacterial infection that is often fatal if not diagnosed and treated promptly. Natural infection in humans is relatively rare, yet persistence in animal reservoirs, arthropod vectors, and water sources combined with a low level of clinical recognition make tularemia a serious potential threat to public health in endemic areas. F. tularensis has also garnered attention as a potential bioterror threat, as widespread dissemination could have devastating consequences on a population. A low infectious dose combined with a wide range of symptoms and a short incubation period makes timely diagnosis of tularemia difficult. Current diagnostic techniques include bacterial culture of patient samples, PCR and serological assays; however, these techniques are time consuming and require technical expertise that may not be available at the point of care. In the event of an outbreak or exposure a more efficient diagnostic platform is needed. The lipopolysaccharide (LPS) component of the bacterial outer leaflet has been identified previously by our group as a potential diagnostic target. For this study, a library of ten monoclonal antibodies specific to F. tularensis LPS were produced and confirmed to be reactive with LPS from type A and type B strains. Antibody pairs were tested in an antigen-capture enzyme-linked immunosorbent assay (ELISA) and lateral flow immunoassay format to select the most sensitive pairings. The antigen-capture ELISA was then used to detect and quantify LPS in serum samples from tularemia patients for the first time to determine the viability of this molecule as a diagnostic target. In parallel, prototype lateral flow immunoassays were developed, and reactivity was assessed, demonstrating the potential utility of this assay as a rapid point-of-care test for diagnosis of tularemia.
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Affiliation(s)
- Emily E. Hannah
- Department of Microbiology and Immunology, Reno School of Medicine, University of Nevada, Reno, NV 89509, USA; (E.E.H.); (S.G.P.); (D.H.); (H.L.D.); (K.R.); (T.N.); (A.D.); (J.A.-U.); (H.R.G.); (P.T.); (K.J.P.); (M.A.G.-H.)
| | - Sujata G. Pandit
- Department of Microbiology and Immunology, Reno School of Medicine, University of Nevada, Reno, NV 89509, USA; (E.E.H.); (S.G.P.); (D.H.); (H.L.D.); (K.R.); (T.N.); (A.D.); (J.A.-U.); (H.R.G.); (P.T.); (K.J.P.); (M.A.G.-H.)
| | - Derrick Hau
- Department of Microbiology and Immunology, Reno School of Medicine, University of Nevada, Reno, NV 89509, USA; (E.E.H.); (S.G.P.); (D.H.); (H.L.D.); (K.R.); (T.N.); (A.D.); (J.A.-U.); (H.R.G.); (P.T.); (K.J.P.); (M.A.G.-H.)
| | - Haley L. DeMers
- Department of Microbiology and Immunology, Reno School of Medicine, University of Nevada, Reno, NV 89509, USA; (E.E.H.); (S.G.P.); (D.H.); (H.L.D.); (K.R.); (T.N.); (A.D.); (J.A.-U.); (H.R.G.); (P.T.); (K.J.P.); (M.A.G.-H.)
| | - Kayleigh Robichaux
- Department of Microbiology and Immunology, Reno School of Medicine, University of Nevada, Reno, NV 89509, USA; (E.E.H.); (S.G.P.); (D.H.); (H.L.D.); (K.R.); (T.N.); (A.D.); (J.A.-U.); (H.R.G.); (P.T.); (K.J.P.); (M.A.G.-H.)
| | - Teerapat Nualnoi
- Department of Microbiology and Immunology, Reno School of Medicine, University of Nevada, Reno, NV 89509, USA; (E.E.H.); (S.G.P.); (D.H.); (H.L.D.); (K.R.); (T.N.); (A.D.); (J.A.-U.); (H.R.G.); (P.T.); (K.J.P.); (M.A.G.-H.)
| | - Anjana Dissanayaka
- Department of Microbiology and Immunology, Reno School of Medicine, University of Nevada, Reno, NV 89509, USA; (E.E.H.); (S.G.P.); (D.H.); (H.L.D.); (K.R.); (T.N.); (A.D.); (J.A.-U.); (H.R.G.); (P.T.); (K.J.P.); (M.A.G.-H.)
| | - Jose Arias-Umana
- Department of Microbiology and Immunology, Reno School of Medicine, University of Nevada, Reno, NV 89509, USA; (E.E.H.); (S.G.P.); (D.H.); (H.L.D.); (K.R.); (T.N.); (A.D.); (J.A.-U.); (H.R.G.); (P.T.); (K.J.P.); (M.A.G.-H.)
| | - Heather R. Green
- Department of Microbiology and Immunology, Reno School of Medicine, University of Nevada, Reno, NV 89509, USA; (E.E.H.); (S.G.P.); (D.H.); (H.L.D.); (K.R.); (T.N.); (A.D.); (J.A.-U.); (H.R.G.); (P.T.); (K.J.P.); (M.A.G.-H.)
| | - Peter Thorkildson
- Department of Microbiology and Immunology, Reno School of Medicine, University of Nevada, Reno, NV 89509, USA; (E.E.H.); (S.G.P.); (D.H.); (H.L.D.); (K.R.); (T.N.); (A.D.); (J.A.-U.); (H.R.G.); (P.T.); (K.J.P.); (M.A.G.-H.)
| | - Kathryn J. Pflughoeft
- Department of Microbiology and Immunology, Reno School of Medicine, University of Nevada, Reno, NV 89509, USA; (E.E.H.); (S.G.P.); (D.H.); (H.L.D.); (K.R.); (T.N.); (A.D.); (J.A.-U.); (H.R.G.); (P.T.); (K.J.P.); (M.A.G.-H.)
| | - Marcellene A. Gates-Hollingsworth
- Department of Microbiology and Immunology, Reno School of Medicine, University of Nevada, Reno, NV 89509, USA; (E.E.H.); (S.G.P.); (D.H.); (H.L.D.); (K.R.); (T.N.); (A.D.); (J.A.-U.); (H.R.G.); (P.T.); (K.J.P.); (M.A.G.-H.)
| | | | - David P. AuCoin
- Department of Microbiology and Immunology, Reno School of Medicine, University of Nevada, Reno, NV 89509, USA; (E.E.H.); (S.G.P.); (D.H.); (H.L.D.); (K.R.); (T.N.); (A.D.); (J.A.-U.); (H.R.G.); (P.T.); (K.J.P.); (M.A.G.-H.)
- Correspondence:
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14
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Evidence of Hantavirus circulation among municipal street sweepers, southwest of Iran. Virusdisease 2021; 32:251-254. [PMID: 34350315 DOI: 10.1007/s13337-021-00694-3] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2020] [Accepted: 05/04/2021] [Indexed: 11/27/2022] Open
Abstract
Hantaviruses are rodent-borne zoonosis pathogens that cause hemorrhagic fever with renal syndrome (HFRS) and Hantavirus cardiopulmonary syndrome (HCPS) in humans. Rodents spread the virus via their excretions. The outbreak of Hantaviruses pose a significant public health problem. The epidemiology and history of Hantaviruses in Iran is not clear and regardless of the data from the few available studies, little is known about its epidemiology in this country. Herein, we discuss the prevalence of IgG antibody against Hantavirus serotypes in 385 street sweepers from southwest of Iran. Serum samples were investigated, using Hantavirus Pool 1 "Eurasia" IgG kit and Pool 2 "America" ELISA IgG kit (Euroimmun, Germany) to detect IgG antibodies against Old and New World Hantaviruses. The results showed a specific IgG antibody in two samples (0.5%). Both of seropositive cases had specific IgG antibody against Old World Hantaviruses. The data of the current study along with the previous data, indicate the circulation of Hantaviruses in Iran. Hence, the risk of Hantavirus infection in high-risk groups should be considered as a serious health issue.
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15
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Ahmad F, Farooq A, Khan MUG. Deep Learning Model for Pathogen Classification Using Feature Fusion and Data Augmentation. Curr Bioinform 2021. [DOI: 10.2174/1574893615999200707143535] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Background:
Bacterial pathogens are deadly for animals and humans. The ease of their dissemination, coupled
with their high capacity for ailment and death in infected individuals, makes them a threat to society.
Objective:
Due to high similarity among genera and species of pathogens, it is sometimes difficult for microbiologists to
differentiate between them. Their automatic classification using deep-learning models can help in reliable, and accurate
outcomes.
Method:
Deep-learning models, namely; AlexNet, GoogleNet, ResNet101, and InceptionV3 are used with numerous
variations including training model from scratch, fine-tuning without pre-trained weights, fine-tuning along with freezing
weights of initial layers, fine-tuning along with adjusting weights of all layers and augmenting the dataset by random
translation and reflection. Moreover, as the dataset is small, fine-tuning and data augmentation strategies are applied to
avoid overfitting and produce a generalized model. A merged feature vector is produced using two best-performing models
and accuracy is calculated by xgboost algorithm on the feature vector by applying cross-validation.
Results:
Fine-tuned models where augmentation is applied produces the best results. Out of these, two-best-performing
deep models i.e. (ResNet101, and InceptionV3) selected for feature fusion, produced a similar validation accuracy of 95.83
with a loss of 0.0213 and 0.1066, and a testing accuracy of 97.92 and 93.75, respectively. The proposed model used xgboost
to attained a classification accuracy of 98.17% by using 35-folds cross-validation.
Conclusion:
The automatic classification using these models can help experts in the correct identification of pathogens.
Consequently, they can help in controlling epidemics and thereby minimizing the socio-economic impact on the community.
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Affiliation(s)
- Fareed Ahmad
- Department of Computer Science and Engineering, Faculty of Electrical Engineering, University of Engineering and Technology, Lahore, Pakistan
| | - Amjad Farooq
- Department of Computer Science and Engineering, Faculty of Electrical Engineering, University of Engineering and Technology, Lahore, Pakistan
| | - Muhammad Usman Ghani Khan
- Department of Computer Science and Engineering, Faculty of Electrical Engineering, University of Engineering and Technology, Lahore, Pakistan
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16
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Esmaeili S, Rohani M, Ghasemi A, Gouya MM, Khayatzadeh S, Mahmoudi A, Ahangari Cohan H, Johansson A, Maurin M, Mostafavi E. Francisella tularensis human infections in a village of northwest Iran. BMC Infect Dis 2021; 21:310. [PMID: 33789598 PMCID: PMC8010941 DOI: 10.1186/s12879-021-06004-y] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2020] [Accepted: 03/22/2021] [Indexed: 11/17/2022] Open
Abstract
Background Recent seroepidemiological studies have suggested that tularemia could be an endemic bacterial zoonosis in Iran. Methods From January 2016 to June 2018, disease cases characterized by fever, cervical lymphadenopathy and ocular involvement were reported in Youzband Village of Kaleybar County, in the East Azerbaijan Province, northwestern Iran. Diagnostic tests included Francisella tularensis serology (including tube agglutination test and ELISA), PCR, and culture. Results Among 11 examined case-patients, the tularemia tube agglutination test was positive in ten and borderline in one. PCR detected the F. tularensisISFtu2 elements and fopA gene in one rodent and a spring water sample from the same geographic area. Conclusions Based on the clinical manifestations of the disease suggesting an oropharyngeal form of tularemia, serology results in case patients, and F. tularensis detection in the local fauna and aquatic environment, the water supply of the village was the likely source of the tularemia outbreak. Intervention such as dredging and chlorination of the main water storage tank of the village and training of villagers and health care workers in preventive measures and treatment of the illness helped control the infection.
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Affiliation(s)
- Saber Esmaeili
- National Reference laboratory for Plague, Tularemia and Q fever, Research Centre for Emerging and Reemerging infectious diseases, Pasteur Institute of Iran, Akanlu, Kabudar Ahang, Hamadan, Iran.,Department of Epidemiology and Biostatistics, Research Centre for Emerging and Reemerging infectious diseases, Pasteur Institute of Iran, Tehran, Iran
| | - Mahdi Rohani
- National Reference laboratory for Plague, Tularemia and Q fever, Research Centre for Emerging and Reemerging infectious diseases, Pasteur Institute of Iran, Akanlu, Kabudar Ahang, Hamadan, Iran.,Department of Microbiology, Pasteur Institute of Iran, Tehran, Iran
| | - Ahmad Ghasemi
- National Reference laboratory for Plague, Tularemia and Q fever, Research Centre for Emerging and Reemerging infectious diseases, Pasteur Institute of Iran, Akanlu, Kabudar Ahang, Hamadan, Iran.,Department of Epidemiology and Biostatistics, Research Centre for Emerging and Reemerging infectious diseases, Pasteur Institute of Iran, Tehran, Iran.,Department of Bacteriology, Faculty of Medical Sciences, Tarbiat Modares University, Tehran, Iran
| | - Mohammad Mehdi Gouya
- Center for Communicable Disease Control, Ministry of Health and Medical Education, Tehran, Iran
| | - Simin Khayatzadeh
- Department of Communicable Disease Control, Deputy of Health, Tabriz University of Medical Sciences, Tabriz, Iran
| | - Ahmad Mahmoudi
- Department of Biology, Faculty of Science, Urmia University, Urmia, Iran
| | - Hossein Ahangari Cohan
- National Reference laboratory for Plague, Tularemia and Q fever, Research Centre for Emerging and Reemerging infectious diseases, Pasteur Institute of Iran, Akanlu, Kabudar Ahang, Hamadan, Iran.,Department of Epidemiology and Biostatistics, Research Centre for Emerging and Reemerging infectious diseases, Pasteur Institute of Iran, Tehran, Iran
| | - Anders Johansson
- Department of Clinical Microbiology and Molecular Infection Medicine Sweden (MIMS), Umeå University, Umeå, Sweden
| | - Max Maurin
- Universite Grenoble Alpes, CNRS, Grenoble INP, CHU Grenoble Alpes, TIMC-IMAG, 38000 Grenoble, Grenoble, France
| | - Ehsan Mostafavi
- National Reference laboratory for Plague, Tularemia and Q fever, Research Centre for Emerging and Reemerging infectious diseases, Pasteur Institute of Iran, Akanlu, Kabudar Ahang, Hamadan, Iran. .,Department of Epidemiology and Biostatistics, Research Centre for Emerging and Reemerging infectious diseases, Pasteur Institute of Iran, Tehran, Iran.
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17
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Ahangari Cohan H, Jamshidian M, Rohani M, Moravedji M, Mostafavi E. Francisella tularensis survey among ranchers and livestock in western Iran. Comp Immunol Microbiol Infect Dis 2020; 74:101598. [PMID: 33302236 DOI: 10.1016/j.cimid.2020.101598] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2020] [Revised: 11/22/2020] [Accepted: 11/23/2020] [Indexed: 10/22/2022]
Abstract
Tularemia is a zoonotic disease that transmitted to humans and domestic animals by wildlife, especially rodents. There are some evidences of the circulation of F. tularensis in rodents, livestock, human populations, and surface waters in western parts of Iran. In this study, we investigated the exposure of livestock and ranchers to F. tularensis in the endemic regions of western Iran. Blood samples were collected from 289 sheep, 103 cattle, and 51 ranchers in 2018. Animal sera were tested by standard tube agglutination method. The specific IgGs against F. tularensis were evaluated by ELISA in human sera. Moreover, the extracted DNAs from 50 sheep spleen samples were evaluated using TaqMan real-time PCR for the presence of ISFtu2 and FopA genes. All animal sera and spleen samples were negative for tularemia. Of the 51 human samples, two samples were seropositive and one sample showed a borderline status for tularemia. Serologic evidence of F. tularensis in the ranchers but negative results in the livestock indicates different transmission routes in human populations and domestic animals in western Iran. Therefore, drinking contaminated water, contact to wildlife or rodents and arthropod bite should be considered as probable routes in the suspicious areas.
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Affiliation(s)
- Hossein Ahangari Cohan
- Department of Pathobiology, Science and Research Branch, Islamic Azad University, Tehran, Iran
| | - Mahmoud Jamshidian
- Department of Pathobiology, Science and Research Branch, Islamic Azad University, Tehran, Iran
| | - Mahdi Rohani
- Department of Microbiology, Pasteur Institute of Iran, Tehran, Iran; National Reference Laboratory for Plague, Tularemia and Q fever, Research Centre for Emerging and Reemerging infectious diseases, Pasteur Institute of Iran, Akanlu, Kabudar-Ahang, Hamadan, Iran
| | - Meysam Moravedji
- Department of clinical sciences, Sanandaj branch, Islamic Azad University, Sanandaj, Iran
| | - Ehsan Mostafavi
- National Reference Laboratory for Plague, Tularemia and Q fever, Research Centre for Emerging and Reemerging infectious diseases, Pasteur Institute of Iran, Akanlu, Kabudar-Ahang, Hamadan, Iran; Department of Epidemiology and Biostatics, Research Centre for Emerging and Reemerging infectious diseases, Pasteur Institute of Iran, Tehran, Iran.
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18
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Ahangari Cohan H, Jamshidian M, Rohani M, Moravedji M, Mostafavi E. Surveillance of Francisella tularensis in surface water of Kurdistan province, west of Iran. Comp Immunol Microbiol Infect Dis 2020; 69:101419. [PMID: 31972499 DOI: 10.1016/j.cimid.2020.101419] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2019] [Revised: 01/01/2020] [Accepted: 01/06/2020] [Indexed: 11/25/2022]
Abstract
BACKGROUND The etiologic agent of tularemia, Francisella tularensis, is transmitted to humans via ingestion of contaminated water or food, arthropods bite, respiratory aerosols, or direct contact with infected animals body fluids or tissues. In the current study, due to the importance of water in transmitting the disease and the report of the disease in different regions of Iran, surface water of Kurdistan province were evaluated for the presence of F.tularensis. MATERIALS AND METHODS Sampling was carried out in five-counties of Kurdistan province. Sixty-six specimens of surface water were collected. The detection was carried out by targeting ISFtu2 and fopA genes using TaqMan real-time PCR. Moreover, the samples were both cultured and inoculated into NMRI inbreed mice. Spleens of inoculated mice and bacterial isolates were tested by TaqMan real-time PCR. RESULTS Despite the lack of isolation of F. tularensis, the results of the molecular testing indicate the presence of bacteria in surface water. Molecular positivity of one sample (1.51%) was confirmed using a real-time PCR for both ISFtu2 and fopA genes. Moreover, 4.54% of the samples were positive for ISFtu2. CONCLUSION Since the in vitro isolation of bacteria from environmental samples is associated with a very low success rate and depends on various environmental parameters, the use of molecular techniques for monitoring of the bacteria in the contaminated areas is fully recommended.
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Affiliation(s)
- Hossein Ahangari Cohan
- Department of Pathobiology, Science and Research Branch, Islamic Azad University, Tehran, Iran
| | - Mahmoud Jamshidian
- Department of Pathobiology, Science and Research Branch, Islamic Azad University, Tehran, Iran
| | - Mahdi Rohani
- Department of Microbiology, Pasteur Institute of Iran, Tehran, Iran; National Reference Laboratory for Plague, Tularemia and Q fever, Research Centre for Emerging and Reemerging infectious diseases, Pasteur Institute of Iran, Akanlu, Kabudar-Ahang, Hamadan, Iran
| | - Meysam Moravedji
- Department of clinical sciences, Faculty of veterinary medicine, Islamic Azad University, Sanandaj Branch, Iran
| | - Ehsan Mostafavi
- National Reference Laboratory for Plague, Tularemia and Q fever, Research Centre for Emerging and Reemerging infectious diseases, Pasteur Institute of Iran, Akanlu, Kabudar-Ahang, Hamadan, Iran; Department of Epidemiology and Biostatics, Research Centre for Emerging and Reemerging infectious diseases, Pasteur Institute of Iran, Tehran, Iran.
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Hemati M, Khalili M, Rohani M, Sadeghi B, Esmaeili S, Ghasemi A, Mahmoudi A, Gyuranecz M, Mostafavi E. A serological and molecular study on Francisella tularensis in rodents from Hamadan province, Western Iran. Comp Immunol Microbiol Infect Dis 2019; 68:101379. [PMID: 31733511 DOI: 10.1016/j.cimid.2019.101379] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2019] [Revised: 10/27/2019] [Accepted: 10/29/2019] [Indexed: 01/11/2023]
Abstract
INTRODUCTION AND PURPOSE Tularemia is a zoonotic disease, the most important hosts of which are rodents. Endemic regions and reservoirs of F. tularensis are not well-researched areas in Iran. The present study aimed to study F. tularensis infection in the rodent populations of western Iran. MATERIALS AND METHODS Samples were collected in different areas of Kabudar Ahang County in Hamadan province (west of Iran) from 2014 to 2017. Tularemia serological and molecular tests were conducted using the tube agglutination test and Real-time PCR method tracking the ISFtu2 gene. Positive serum samples were evaluated for cross-reactivity with brucellosis. RESULTS A total of 433 rodents, collected from 33 localities, were included in the study. The most abundant species belonged to the Persian jird (Meriones persicus; 75.5%), and Libyan jird (Meriones libycus; 10.1%). Among the studied samples, three (0.74 %) were seropositive and five (1.15%) were PCR positive. Seropositive samples were two M. persicus and one M. libycus, and PCR positive rodents were four M. persicus and one M. vinogradovi. Tularemia seropositive samples showed no cross-reactivity with brucellosis. CONCLUSION Given the presence of infection in rodents with tularemia agent in the studied area, it is crucial to elucidate the risks of rodent exposure to tularemia for physicians, health personnel and the general population.
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Affiliation(s)
- Majid Hemati
- Department of Pathobiology, Faculty of Veterinary Medicine, Shahid Bahonar University of Kerman, Kerman, Iran
| | - Mohammad Khalili
- Department of Pathobiology, Faculty of Veterinary Medicine, Shahid Bahonar University of Kerman, Kerman, Iran
| | - Mahdi Rohani
- National Reference Laboratory for Plague, Tularemia and Q Fever, Research Centre for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Kabudar Ahang, Hamadan, Iran; Department of Microbiology, Pasteur Institute of Iran, Tehran, Iran
| | - Balal Sadeghi
- Food Hygiene and Public Health Department, Faculty of Veterinary Medicine, Shahid Bahonar University of Kerman, Kerman, Iran
| | - Saber Esmaeili
- National Reference Laboratory for Plague, Tularemia and Q Fever, Research Centre for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Kabudar Ahang, Hamadan, Iran; Department of Epidemiology and Biostatistics, Research Centre for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Tehran, Iran
| | - Ahmad Ghasemi
- National Reference Laboratory for Plague, Tularemia and Q Fever, Research Centre for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Kabudar Ahang, Hamadan, Iran; Department of Epidemiology and Biostatistics, Research Centre for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Tehran, Iran
| | - Ahmad Mahmoudi
- National Reference Laboratory for Plague, Tularemia and Q Fever, Research Centre for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Kabudar Ahang, Hamadan, Iran; Department of Epidemiology and Biostatistics, Research Centre for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Tehran, Iran
| | - Miklós Gyuranecz
- Institute for Veterinary Medical Research, Centre for Agricultural Research, Hungarian Academy of Sciences, Budapest, Hungary; Department of Microbiology and Infectious Diseases, University of Veterinary Medicine, Budapest, Hungary
| | - Ehsan Mostafavi
- National Reference Laboratory for Plague, Tularemia and Q Fever, Research Centre for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Kabudar Ahang, Hamadan, Iran; Department of Epidemiology and Biostatistics, Research Centre for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Tehran, Iran.
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20
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Esmaeili S, Ghasemi A, Naserifar R, Jalilian A, Molaeipoor L, Maurin M, Mostafavi E. Epidemiological survey of tularemia in Ilam Province, west of Iran. BMC Infect Dis 2019; 19:502. [PMID: 31174488 PMCID: PMC6556031 DOI: 10.1186/s12879-019-4121-1] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2019] [Accepted: 05/22/2019] [Indexed: 12/20/2022] Open
Abstract
Background Francisella tularensis is the causative agent of tularemia in humans and a large number of animal species. Considering recent evidence of the circulation of this bacterium in different parts of Iran, especially in the western provinces, the aim of current study was to determine the tularemia seroprevalence in the human population living in Ilam Province. Methods In 2015, 360 serum samples were collected from five groups of people: ranchers (n = 112), farmers (n = 79), butchers and slaughterhouse workers (n = 61), Nature Conservation Officers (n = 34), and referents of medical diagnostic laboratories (n = 74). These samples were tested for the presence of anti- F. tularensis IgG antibodies using the ELISA method. Results According to the ELISA manufacturer cutoffs, we found that 10 (2.78%) and 9 (2.5%) sera, respectively, were positive or borderline for F. tularensis IgG antibodies. The highest tularemia seroprevalence was observed among farmers (7.59%). Conclusions Our results strongly support the circulation of tularemia in Ilam Province. Because no human tularemia case has been reported so far in this province, we recommend specific education programs to increase knowledge of local health care professionals about this important zoonotic disease.
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Affiliation(s)
- Saber Esmaeili
- Department of Epidemiology and Biostatistics, Research Centre for Emerging and Reemerging infectious diseases, Pasteur Institute of Iran, No. 69, Pasteur Ave, Tehran, 1316943551, Iran.,National Reference laboratory for diagnosis and research on Plague, Tularemia and Q fever, Research Centre for Emerging and Reemerging infectious diseases, Pasteur Institute of Iran, Akanlu, Kabudar Ahang, Hamadan, Iran.,Department of Bacteriology, Faculty of Medical Sciences, Tarbiat Modares University, Tehran, Iran
| | - Ahmad Ghasemi
- Department of Epidemiology and Biostatistics, Research Centre for Emerging and Reemerging infectious diseases, Pasteur Institute of Iran, No. 69, Pasteur Ave, Tehran, 1316943551, Iran.,National Reference laboratory for diagnosis and research on Plague, Tularemia and Q fever, Research Centre for Emerging and Reemerging infectious diseases, Pasteur Institute of Iran, Akanlu, Kabudar Ahang, Hamadan, Iran.,Department of Bacteriology, Faculty of Medical Sciences, Tarbiat Modares University, Tehran, Iran
| | - Razi Naserifar
- Department of Parasitology, Faculty of Health, Ilam University of Medical Sciences, Ilam, Iran
| | - Ali Jalilian
- Department of Parasitology, Faculty of Health, Ilam University of Medical Sciences, Ilam, Iran
| | - Leila Molaeipoor
- Department of Epidemiology and Biostatistics, Research Centre for Emerging and Reemerging infectious diseases, Pasteur Institute of Iran, No. 69, Pasteur Ave, Tehran, 1316943551, Iran.,Department of Epidemiology, School of Public Health, Iran University of Medical Sciences, Tehran, Iran.,Student Research Committee, Faculty of Public Health Branch, Iran University of Medical Sciences, Tehran, Iran
| | - Max Maurin
- Centre National de Référence Francisella tularensis, Laboratoire de Bactériologie, Institut de Biologie et de Pathologie, CHU Grenoble Alpes, Grenoble, France.,TIMC-IMAG, CNRS/UGA, UMR5525, Université Grenoble Alpes, Grenoble, France
| | - Ehsan Mostafavi
- Department of Epidemiology and Biostatistics, Research Centre for Emerging and Reemerging infectious diseases, Pasteur Institute of Iran, No. 69, Pasteur Ave, Tehran, 1316943551, Iran. .,National Reference laboratory for diagnosis and research on Plague, Tularemia and Q fever, Research Centre for Emerging and Reemerging infectious diseases, Pasteur Institute of Iran, Akanlu, Kabudar Ahang, Hamadan, Iran.
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21
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Azari-Hamidian S, Norouzi B, Harbach RE. A detailed review of the mosquitoes (Diptera: Culicidae) of Iran and their medical and veterinary importance. Acta Trop 2019; 194:106-122. [PMID: 30898616 DOI: 10.1016/j.actatropica.2019.03.019] [Citation(s) in RCA: 35] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2018] [Revised: 03/13/2019] [Accepted: 03/13/2019] [Indexed: 11/27/2022]
Abstract
Mosquitoes (Diptera: Culicidae) are the most significant arthropods of medical importance because of the burden of diseases, such as malaria, encephalitis and filariasis, which are caused by pathogens and parasites they transmit to humans. In 2007, the most recently published checklist of Iranian mosquitoes included 64 species representing seven genera. Public databases were searched to the end of August 2018 for publications concerning the diseases in Iran caused by mosquito-borne pathogens. Pertinent information was extracted and analyzed, and the checklist of Iranian mosquitoes was updated. Six arboviral diseases, two bacterial diseases, four helminthic diseases and two protozoal diseases occur in Iran. The agents of these diseases are biologically or mechanically known or assumed to be transmitted by mosquitoes. The updated checklist of Iranian mosquitoes includes 69 species representing seven or 11 genera depending on the generic classification of aedines. There is no published information about the role of mosquitoes in the transmission of the causal agents of avian malaria, avian pox, bovine ephemeral fever, dengue fever, Rift Valley fever, Sindbis fever, Deraiophoronema evansi infection, lymphatic filariasis, anthrax and tularemia in Iran. There is just one imported case of lymphatic filariasis, which is not endemic in the country. It seems arthropods do not play an important role in the epidemiology of anthrax and ixodid ticks are the main vectors of the tularemia bacterium. In view of the recent finding of only a few adults and larvae of Aedes albopictus in southeastern Iran and the absence of Ae. aegypti, it is not possible to infer the indigenous transmission of the dengue fever virus in Iran. Considering the importance of mosquito-borne diseases in the country, it is necessary to improve vector and vector-borne disease surveillance in order to apply the best integrated vector management interventions as a part of the One Health concept.
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Affiliation(s)
- Shahyad Azari-Hamidian
- Research Center of Health and Environment, Guilan University of Medical Sciences, Rasht, Iran; School of Health, Guilan University of Medical Sciences, Rasht, Iran.
| | - Behzad Norouzi
- Research Center of Health and Environment, Guilan University of Medical Sciences, Rasht, Iran
| | - Ralph E Harbach
- Department of Life Sciences, Natural History Museum, London, UK
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Jeske K, Tomaso H, Imholt C, Schulz J, Beerli O, Suchomel J, Heroldova M, Jacob J, Staubach C, Ulrich RG. Detection of Francisella tularensis in three vole species in Central Europe. Transbound Emerg Dis 2019; 66:1029-1032. [PMID: 30447176 DOI: 10.1111/tbed.13078] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2018] [Revised: 10/25/2018] [Accepted: 11/12/2018] [Indexed: 11/28/2022]
Abstract
Francisella tularensis is a zoonotic, gram-negative bacterium that causes tularemia in humans. Depending on its subspecies and the route of transmission, mild to lethal courses have been reported. F. tularensis subsp. holarctica is the only subspecies found in Europe and affects a plenitude of vertebrates including lagomorphs and rodents. Population outbreaks of certain rodent species are likely to be involved in the transmission of this pathogen. This molecular survey aims to evaluate the presence of F. tularensis in small mammals from three Central European countries. Using a real-time polymerase chain reaction, F. tularensis DNA was detected in common voles (Microtus arvalis) from Switzerland and in field voles (Microtus agrestis) and a bank vole (Myodes glareolus) from Germany, but not in any other small mammal species. All common voles from the Czech Republic were negative for F. tularensis DNA. The prevalence in the three vole species varied between 1.3% and 3.0%. In conclusion, Francisella tularensis DNA was detected in three vole species in two of three countries investigated. The observed low prevalence raises questions on the role of voles for the transmission of Francisella tularensis in Central Europe.
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Affiliation(s)
- Kathrin Jeske
- Friedrich-Loeffler-Institut, Institute of Novel and Emerging Infectious Diseases, Greifswald-Insel Riems, Germany
| | - Herbert Tomaso
- Friedrich-Loeffler-Institut, Institute of Bacterial Infections and Zoonoses, Jena, Germany
| | - Christian Imholt
- Julius Kühn-Institute, Institute for Plant Protection in Horticulture and Forests, Vertebrate Research, Münster, Germany
| | - Jana Schulz
- Friedrich-Loeffler-Institut, Institute of Epidemiology, Greifswald-Insel Riems, Germany.,Technical University of Denmark, National Veterinary Institute, Kongens Lyngby, Denmark
| | - Olivia Beerli
- Institut für Parasitologie, Universität Zürich, Zürich, Switzerland
| | - Josef Suchomel
- Faculty of AgriSciences, Department of Zoology, Fisheries, Hydrobiology and Apiculture, Mendel University in Brno, Brno, Czech Republic
| | - Marta Heroldova
- Department of Forest Ecology, Mendel University in Brno, Brno, Czech Republic
| | - Jens Jacob
- Julius Kühn-Institute, Institute for Plant Protection in Horticulture and Forests, Vertebrate Research, Münster, Germany
| | - Christoph Staubach
- Friedrich-Loeffler-Institut, Institute of Epidemiology, Greifswald-Insel Riems, Germany
| | - Rainer G Ulrich
- Friedrich-Loeffler-Institut, Institute of Novel and Emerging Infectious Diseases, Greifswald-Insel Riems, Germany
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