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Kut P, Garcia-Pichel F. Nimble vs. torpid responders to hydration pulse duration among soil microbes. Commun Biol 2024; 7:455. [PMID: 38609432 PMCID: PMC11015016 DOI: 10.1038/s42003-024-06141-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2023] [Accepted: 04/03/2024] [Indexed: 04/14/2024] Open
Abstract
Environmental parameters vary in time, and variability is inherent in soils, where microbial activity follows precipitation pulses. The expanded pulse-reserve paradigm (EPRP) contends that arid soil microorganisms have adaptively diversified in response to pulse regimes differing in frequency and duration. To test this, we incubate Chihuahuan Desert soil microbiomes under separate treatments in which 60 h of hydration was reached with pulses of different pulse duration (PD), punctuated by intervening periods of desiccation. Using 16S rRNA gene amplicon data, we measure treatment effects on microbiome net growth, growth efficiency, diversity, and species composition, tracking the fate of 370 phylotypes (23% of those detected). Consistent with predictions, microbial diversity is a direct, saturating function of PD. Increasingly larger shifts in community composition are detected with decreasing PD, as specialist phylotypes become more prominent. One in five phylotypes whose fate was tracked responds consistently to PD, some preferring short pulses (nimble responders; NIRs) and some longer pulses (torpid responders; TORs). For pulses shorter than a day, microbiome growth efficiency is an inverse function of PD, as predicted. We conclude that PD in pulsed soil environments constitutes a major driver of microbial community assembly and function, largely consistent with the EPRP predictions.
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Affiliation(s)
- Patrick Kut
- Center for Fundamental and Applied Microbiomics and School of Life Sciences, Arizona State University, Tempe, AZ, USA
| | - Ferran Garcia-Pichel
- Center for Fundamental and Applied Microbiomics and School of Life Sciences, Arizona State University, Tempe, AZ, USA.
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Noor RS, Shah AN, Tahir MB, Umair M, Nawaz M, Ali A, Ercisli S, Abdelsalam NR, Ali HM, Yang SH, Ullah S, Assiri MA. Recent Trends and Advances in Additive-Mediated Composting Technology for Agricultural Waste Resources: A Comprehensive Review. ACS OMEGA 2024; 9:8632-8653. [PMID: 38434807 PMCID: PMC10905604 DOI: 10.1021/acsomega.3c06516] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/31/2023] [Revised: 01/18/2024] [Accepted: 01/23/2024] [Indexed: 03/05/2024]
Abstract
Agriculture waste has increased annually due to the global food demand and intensive animal production. Preventing environmental degradation requires fast and effective agricultural waste treatment. Aerobic digestion or composting uses agricultural wastes to create a stabilized and sterilized organic fertilizer and reduces chemical fertilizer input. Indeed, conventional composting technology requires a large surface area, a long fermentation period, significant malodorous emissions, inferior product quality, and little demand for poor end results. Conventional composting loses a lot of organic nitrogen and carbon. Thus, this comprehensive research examined sustainable and adaptable methods for improving agricultural waste composting efficiency. This review summarizes composting processes and examines how compost additives affect organic solid waste composting and product quality. Our findings indicate that additives have an impact on the composting process by influencing variables including temperature, pH, and moisture. Compost additive amendment could dramatically reduce gas emissions and mineral ion mobility. Composting additives can (1) improve the physicochemical composition of the compost mixture, (2) accelerate organic material disintegration and increase microbial activity, (3) reduce greenhouse gas (GHG) and ammonia (NH3) emissions to reduce nitrogen (N) losses, and (4) retain compost nutrients to increase soil nutrient content, maturity, and phytotoxicity. This essay concluded with a brief summary of compost maturity, which is essential before using it as an organic fertilizer. This work will add to agricultural waste composting technology literature. To increase the sustainability of agricultural waste resource utilization, composting strategies must be locally optimized and involve the created amendments in a circular economy.
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Affiliation(s)
- Rana Shahzad Noor
- Department
of Agriculture, Biological, Environment and Energy Engineering, College
of Engineering, Northeast Agricultural University, Harbin 150030, China
- Faculty
of Agricultural Engineering and Technology, PMAS-Arid Agriculture University, Rawalpindi 46000, Pakistan
| | - Adnan Noor Shah
- Department
of Agricultural Engineering, Khwaja Fareed
University of Engineering and Information Technology, Rahim Yar Khan 64200, Punjab, Pakistan
| | - Muhammad Bilal Tahir
- Institute
of Physics, Khwaja Fareed University of
Engineering and Information Technology, Rahim Yar Khan 64200, Punjab, Pakistan
| | - Muhammad Umair
- Faculty
of Agricultural Engineering and Technology, PMAS-Arid Agriculture University, Rawalpindi 46000, Pakistan
| | - Muhammad Nawaz
- Department
of Agricultural Engineering, Khwaja Fareed
University of Engineering and Information Technology, Rahim Yar Khan 64200, Punjab, Pakistan
| | - Amjed Ali
- Faculty
of Agriculture, Department of Agronomy, University of Sargodha, Sargodha 40100, Punjab, Pakistan
| | - Sezai Ercisli
- Department
of Horticulture, Faculty of Agriculture, Ataturk University, 25240 Erzurum, Turkiye
| | - Nader R. Abdelsalam
- Agricultural
Botany Department, Faculty of Agriculture (Saba Basha), Alexandria University, Alexandria 21531, Egypt
| | - Hayssam M. Ali
- Department
of Botany and Microbiology, College of Science, King Saud University, Riyadh 11451, Saudi Arabia
| | - Seung Hwan Yang
- Department
of Biotechnology, Chonnam National University, Yeosu 59626, South Korea
| | - Sami Ullah
- Department
of Chemistry, College of Science, King Khalid
University, Abha 61413, Saudi Arabia
| | - Mohammed Ali Assiri
- Department
of Chemistry, College of Science, King Khalid
University, Abha 61413, Saudi Arabia
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