Metagenomics study of soil microorganisms involved in the carbon cycle in a saline-alkaline meadow steppe in the Songnen Plain in Northeast China

Soil microorganisms play an important role in regulating and contributing to carbon cycling processes in grassland ecosystems. Soil salinization is one of the major problems causing soil degradation, and its effects on carbon cycle immobilization-related functional genes in soil microorganisms remain unknown. Therefore, we took Songnen salinization grassland as the research object, selected grasslands with different salinization levels, and explored the diversity of soil microorganisms and functional genes related to carbon cycling in Songnen grassland with different salinization levels through metagenomic technology. The results showed that with the increase of salinity, the relative abundance of Ascomycetes increased, while the relative abundance of Proteus and Firmicutes decreased. In addition, the relative abundance of functional genes related to carbon cycling fixation has also decreased. As the degree of soil salinization increases, the relative abundance of glycoside hydrolases (GH)130 family significantly increases, while the relative abundance of soil carbohydrate enzymes belonging to GH3 and GH55 families significantly decreases. Using structural equation modeling (SEM), it was found that soil pH and conductivity (EC) have a significant impact on soil microbial diversity and functional genes related to carbon cycling fixation. The increase in soil pH directly reduces the Shannon diversity of soil microbial diversity and functional genes related to carbon cycling fixation. Therefore, it can be concluded that the intensification of grassland salinization reduces the diversity of bacteria and fungi, and affects the diversity of functional genes related to carbon cycling fixation by reducing the total diversity of bacteria. The increase in salinity has a negative feedback effect on grassland soil carbon cycling. This study provides a theoretical framework for grassland soil carbon sequestration and degradation restoration.

Deep incorporation of organic amendments into soils of a 'Calardis Musqué' vineyard: effects on greenhouse gas emissions, vine vigor, and grape quality

Background

Traditional wine growing regions are increasingly endangered by climatic alterations. One promising approach to mitigate advancing climate change could be an increase of soil organic matter. Here, especially subsoils are of interest as they provide higher carbon storage potential than topsoils. In this context, vineyard subsoils could be particularly suitable since they are deeply cultivated once before planting and afterwards, left at rest for several decades due to the perennial nature of grapevines.

Methods

For this purpose, a biochar compost substrate and greenwaste compost were incorporated in up to 0.6 m depth before planting a new experimental vineyard with the fungus-resistant grapevine cultivar 'Calardis Musqué'. The influence of this deep incorporation on greenhouse gas emissions and grapevine performance was evaluated and compared to a non-amended control using sensor-based analyses.

Results

Increased CO2 emissions and lower N2O emissions were found for the incorporation treatments compared to the control, but these differences were not statistically significant due to high spatial variability. Only few plant traits like chlorophyll content or berry cuticle characteristics were significantly affected in some of the experimental years. Over the course of the study, annual climatic conditions had a much stronger influence on plant vigor and grape quality than the incorporated organic amendments.

Discussion

In summary, organic soil amendments and their deep incorporation did not have any significant effect on greenhouse gas emissions and no measurable or only negligible effect on grapevine vigor, and grape quality parameters. Thus, according to our study the deposition of organic amendments in vineyard subsoils seems to be an option for viticulture to contribute to carbon storage in soils in order to mitigate climate change.

Drying and rewetting cycles increased soil carbon dioxide rather than nitrous oxide emissions: A meta-analysis

The increased frequency of extreme weather variations worldwide has resulted in dramatic changes in the soil water content via pronounced drying and rewetting cycles (DWCs). A comprehensive exploration of carbon dioxide (CO₂) and nitrous oxide (N₂O) emissions in response to DWCs can help summarize the existing results and better estimate terrestrial greenhouse gas emissions under the intensified drought and precipitation variations. This meta-analysis based on soil emissions of CO₂ (868 observations, 29 studies) and N₂O (52 observations, 19 studies) at the global scale investigated the direction and intensity of the changes in soil CO₂ and N₂O emissions in response to DWCs as controlled by experimental variables including land use type, soil texture, soil nutrients, and frequency and duration of DWCs. The results showed that, compared to the constant soil water content, DWCs led to the increase in CO₂ emissions by 35.7% (95% confidence intervals ranging from 0.300 to 0.415), whereas it had no significant effect on N₂O emissions (-0.2638 to 1.4751). The random-effects model indicated that soil water-filled pore space during wetting, soil clay content, days of drying and wetting, and frequency of DWCs significantly affected CO₂ and N₂O emissions in response to DWCs. Furthermore, potential biotic and abiotic factors affecting soil CO₂ and N₂O emissions under DWCs are also summarized, and it was proposed that mobility and availability of carbon substrate as well as enhanced microbial activity and abundance are the main drivers facilitating soil CO₂ and N₂O emissions in response to DWCs. However, soil gas diffusion or oxygen availability also dominated soil N₂O emissions under DWCs. Overall, this study improves our understanding of soil CO₂ and N₂O emissions in response to various DWC scenarios and facilitates the development of better greenhouse gas mitigation strategies against the background of a rapidly changing climate.

Soil Moisture Affects the Rapid Response of Microbes to Labile Organic C Addition

Pulsed inputs of labile organic carbon (LOC) are common in soils and significantly affect carbon cycling. However, it remains unclear how soil moisture content affects microbial responses to LOC inputs and the relative contributions of native soil organic matter (SOM) and LOC derived from CO2 emissions during this process. In this study, we aimed to elucidate how moisture content affects microbial response to LOC inputs and native SOM. Here, 13C-labeled glucose was added to soils under nine soil moisture treatments [ranging from 10 to 90% of the water holding capacity (WHC)], and the immediate utilization of LOC and native SOM by microbes was measured. We found that the response of soil microbes to LOC was rapid, and promoted native SOM decomposition. Soil moisture content influenced the microbial usage of LOC and native SOM. A soil water content of 60% WHC was the optimal threshold for changes in the proportion of LOC and native SOM utilized by the microbes. Specifically, we found that when the soil moisture content was below 60% WHC, the ratio between LOC and native SOM increased with increasing moisture content levels. It gradually decreased when the soil moisture content was above 60% WHC. Overall, these findings emphasize the important role of moisture and LOC inputs in soil C cycles.