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Porretta D, Canestrelli D. The ecological importance of hybridization. Trends Ecol Evol 2023; 38:1097-1108. [PMID: 37620217 DOI: 10.1016/j.tree.2023.07.003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2023] [Revised: 07/16/2023] [Accepted: 07/20/2023] [Indexed: 08/26/2023]
Abstract
Hybridization as an evolutionary process has been studied in depth over the past few decades. Research has focused on its role in shaping reproductive barriers, its adaptive value, and its genomic consequences. In contrast, our knowledge of ecological dimensions of hybridization is still in its infancy, despite hybridization being an inherently ecological interaction. Using examples from various organisms, we show that hybridization can affect and be affected by non-reproductive interactions, including predation, competition, parasitism, mutualism, commensalism, and organism-environment interactions, with significant implications for community structure and ecosystem functioning. However, since these dimensions of hybridization have mostly been revealed from studies designed to decipher other evolutionary processes, we argue that much of the eco-evolutionary importance of hybridization is yet to be discovered.
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Affiliation(s)
- Daniele Porretta
- Department of Environmental Biology, Sapienza University of Rome, Italy.
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2
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Tandem Repeat DNA Provides Many Cytological Markers for Hybrid Zone Analysis in Two Subspecies of the Grasshopper Chorthippus parallelus. Genes (Basel) 2023; 14:genes14020397. [PMID: 36833324 PMCID: PMC9957195 DOI: 10.3390/genes14020397] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2022] [Revised: 01/29/2023] [Accepted: 02/01/2023] [Indexed: 02/05/2023] Open
Abstract
Recent advances in next generation sequencing (NGS) have greatly increased our understanding of non-coding tandem repeat (TR) DNA. Here we show how TR DNA can be useful for the study of hybrid zones (HZ), as it serves as a marker to identify introgression in areas where two biological entities come in contact. We used Illumina libraries to analyse two subspecies of the grasshopper Chorthippus parallelus, which currently form a HZ in the Pyrenees. We retrieved a total of 152 TR sequences, and used fluorescent in situ hybridization (FISH) to map 77 families in purebred individuals from both subspecies. Our analysis revealed 50 TR families that could serve as markers for analysis of this HZ, using FISH. Differential TR bands were unevenly distributed between chromosomes and subspecies. Some of these TR families yielded FISH bands in only one of the subspecies, suggesting the amplification of these TR families after the geographic separation of the subspecies in the Pleistocene. Our cytological analysis of two TR markers along a transect of the Pyrenean hybrid zone showed asymmetrical introgression of one subspecies into the other, consistent with previous findings using other markers. These results demonstrate the reliability of TR-band markers for hybrid zone studies.
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3
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Narrow Genetic Diversity of Wolbachia Symbionts in Acrididae Grasshopper Hosts (Insecta, Orthoptera). Int J Mol Sci 2022; 23:ijms23020853. [PMID: 35055035 PMCID: PMC8775660 DOI: 10.3390/ijms23020853] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2021] [Revised: 01/08/2022] [Accepted: 01/11/2022] [Indexed: 01/27/2023] Open
Abstract
Bacteria of the Wolbachia genus are maternally inherited symbionts of Nematoda and numerous Arthropoda hosts. There are approximately 20 lineages of Wolbachia, which are called supergroups, and they are designated alphabetically. Wolbachia strains of the supergroups A and B are predominant in arthropods, especially in insects, and supergroup F seems to rank third. Host taxa have been studied very unevenly for Wolbachia symbionts, and here, we turn to one of largely unexplored insect families: Acrididae. On the basis of five genes subject to multilocus sequence typing, we investigated the incidence and genetic diversity of Wolbachia in 41 species belonging three subfamilies (Gomphocerinae, Oedipodinae, and Podisminae) collected in Turkey, Kazakhstan, Tajikistan, Russia, and Japan, making 501 specimens in total. Our results revealed a high incidence and very narrow genetic diversity of Wolbachia. Although only the strains belonging to supergroups A and B are commonly present in present, the Acrididae hosts here proved to be infected with supergroups B and F without A-supergroup variants. The only trace of an A-supergroup lineage was noted in one case of an inter-supergroup recombinant haplotype, where the ftsZ gene came from supergroup A, and the others from supergroup B. Variation in the Wolbachia haplotypes in Acrididae hosts within supergroups B and F was extremely low. A comprehensive genetic analysis of Wolbachia diversity confirmed specific features of the Wolbachia allelic set in Acrididae hosts. This result can help to elucidate the crucial issue of Wolbachia biology: the route(s) and mechanism(s) of Wolbachia horizontal transmission.
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4
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Bruzzese DJ, Schuler H, Wolfe TM, Glover MM, Mastroni JV, Doellman MM, Tait C, Yee WL, Rull J, Aluja M, Hood GR, Goughnour RB, Stauffer C, Nosil P, Feder JL. Testing the potential contribution of Wolbachia to speciation when cytoplasmic incompatibility becomes associated with host-related reproductive isolation. Mol Ecol 2021; 31:2935-2950. [PMID: 34455644 PMCID: PMC9290789 DOI: 10.1111/mec.16157] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2021] [Revised: 08/18/2021] [Accepted: 08/25/2021] [Indexed: 01/04/2023]
Abstract
Endosymbiont‐induced cytoplasmic incompatibility (CI) may play an important role in arthropod speciation. However, whether CI consistently becomes associated or coupled with other host‐related forms of reproductive isolation (RI) to impede the transfer of endosymbionts between hybridizing populations and further the divergence process remains an open question. Here, we show that varying degrees of pre‐ and postmating RI exist among allopatric populations of two interbreeding cherry‐infesting tephritid fruit flies (Rhagoletis cingulata and R. indifferens) across North America. These flies display allochronic and sexual isolation among populations, as well as unidirectional reductions in egg hatch in hybrid crosses involving southwestern USA males. All populations are infected by a Wolbachia strain, wCin2, whereas a second strain, wCin3, only co‐infects flies from the southwest USA and Mexico. Strain wCin3 is associated with a unique mitochondrial DNA haplotype and unidirectional postmating RI, implicating the strain as the cause of CI. When coupled with nonendosymbiont RI barriers, we estimate the strength of CI associated with wCin3 would not prevent the strain from introgressing from infected southwestern to uninfected populations elsewhere in the USA if populations were to come into secondary contact and hybridize. In contrast, cytoplasmic–nuclear coupling may impede the transfer of wCin3 if Mexican and USA populations were to come into contact. We discuss our results in the context of the general paucity of examples demonstrating stable Wolbachia hybrid zones and whether the spread of Wolbachia among taxa can be constrained in natural hybrid zones long enough for the endosymbiont to participate in speciation.
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Affiliation(s)
- Daniel J Bruzzese
- Department of Biological Sciences, University of Notre Dame, Notre Dame, IN, USA
| | - Hannes Schuler
- Faculty of Science and Technology, Free University of Bozen-Bolzano, Bozen-Bolzano, Italy.,Competence Centre for Plant Health, Free University of Bozen-Bolzano, Bozen-Bolzano, Italy
| | - Thomas M Wolfe
- Department of Forest and Soil Sciences, Boku, University of Natural Resources and Life Sciences, Vienna, Austria
| | - Mary M Glover
- Department of Biological Sciences, University of Notre Dame, Notre Dame, IN, USA
| | - Joseph V Mastroni
- Department of Biological Sciences, University of Notre Dame, Notre Dame, IN, USA
| | - Meredith M Doellman
- Department of Biological Sciences, University of Notre Dame, Notre Dame, IN, USA
| | - Cheyenne Tait
- Department of Biological Sciences, University of Notre Dame, Notre Dame, IN, USA
| | - Wee L Yee
- United States Department of Agriculture, Temperate Tree Fruit & Vegetable Research Unit, Agricultural Research Service, Wapato, WA, USA
| | - Juan Rull
- Instituto de Ecología A.C., Xalapa, México.,LIEMEN-División Control Biológico de Plagas, PROIMI Biotecnología-CONICET, Tucumán, Argentina
| | | | - Glen Ray Hood
- Department of Biological Sciences, Wayne State University, Detroit, MI, USA
| | | | - Christian Stauffer
- Department of Forest and Soil Sciences, Boku, University of Natural Resources and Life Sciences, Vienna, Austria
| | - Patrik Nosil
- CEFE, University Montpellier, CNRS, EPHE, IRD, University Paul Valéry Montpellier 3, Montpellier, France.,Department of Biology, Utah State University, UT, USA
| | - Jeffery L Feder
- Department of Biological Sciences, University of Notre Dame, Notre Dame, IN, USA
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5
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Pereira RJ, Ruiz‐Ruano FJ, Thomas CJ, Pérez‐Ruiz M, Jiménez‐Bartolomé M, Liu S, Torre J, Bella JL. Mind the
numt
: Finding informative mitochondrial markers in a giant grasshopper genome. J ZOOL SYST EVOL RES 2020. [DOI: 10.1111/jzs.12446] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Affiliation(s)
- Ricardo J. Pereira
- Division of Evolutionary Biology Faculty of Biology II Ludwig‐ Maximilians‐Universität München Planegg‐Martinsried Germany
| | - Francisco J. Ruiz‐Ruano
- Department of Genetics University of Granada Granada Spain
- Department of Ecology and Genetics – Evolutionary Biology Evolutionary Biology Centre (EBC) Uppsala University Uppsala Sweden
- Department of Organismal Biology – Systematic Biology Evolutionary Biology Centre (EBC) Uppsala University Uppsala Sweden
| | - Callum J.E. Thomas
- Division of Evolutionary Biology Faculty of Biology II Ludwig‐ Maximilians‐Universität München Planegg‐Martinsried Germany
| | - Mar Pérez‐Ruiz
- Departamento de Biología (Genética) Facultad de Ciencias Universidad Autónoma de Madrid Madrid Spain
| | - Miguel Jiménez‐Bartolomé
- Departamento de Biología (Genética) Facultad de Ciencias Universidad Autónoma de Madrid Madrid Spain
| | - Shanlin Liu
- Department of Entomology College of Plant Protection China Agricultural University Beijing China
| | - Joaquina Torre
- Departamento de Biología (Genética) Facultad de Ciencias Universidad Autónoma de Madrid Madrid Spain
- Centro de Investigación en Biodiversidad y Cambio Global (CIBC‐UAM) Universidad Autónoma de Madrid Madrid Spain
| | - José L. Bella
- Departamento de Biología (Genética) Facultad de Ciencias Universidad Autónoma de Madrid Madrid Spain
- Centro de Investigación en Biodiversidad y Cambio Global (CIBC‐UAM) Universidad Autónoma de Madrid Madrid Spain
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6
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Ding H, Yeo H, Puniamoorthy N. Wolbachia infection in wild mosquitoes (Diptera: Culicidae): implications for transmission modes and host-endosymbiont associations in Singapore. Parasit Vectors 2020; 13:612. [PMID: 33298138 PMCID: PMC7724734 DOI: 10.1186/s13071-020-04466-8] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2020] [Accepted: 11/05/2020] [Indexed: 12/31/2022] Open
Abstract
Background Wolbachia are intracellular bacterial endosymbionts found in most insect lineages. In mosquitoes, the influence of these endosymbionts on host reproduction and arboviral transmission has spurred numerous studies aimed at using Wolbachia infection as a vector control technique. However, there are several knowledge gaps in the literature and little is known about natural Wolbachia infection across species, their transmission modes, or associations between various Wolbachia lineages and their hosts. This study aims to address these gaps by exploring mosquito-Wolbachia associations and their evolutionary implications. Methods We conducted tissue-specific polymerase chain reaction screening for Wolbachia infection in the leg, gut and reproductive tissues of wild mosquitoes from Singapore using the Wolbachia surface protein gene (wsp) molecular marker. Mosquito-Wolbachia associations were explored using three methods—tanglegram, distance-based, and event-based methods—and by inferred instances of vertical transmission and host shifts. Results Adult mosquitoes (271 specimens) representing 14 genera and 40 species were screened for Wolbachia. Overall, 21 species (51.2%) were found positive for Wolbachia, including five in the genus Aedes and five in the genus Culex. To our knowledge, Wolbachia infections have not been previously reported in seven of these 21 species: Aedes nr. fumidus, Aedes annandalei, Uranotaenia obscura, Uranotaenia trilineata, Verrallina butleri, Verrallina sp. and Zeugnomyia gracilis. Wolbachia were predominantly detected in the reproductive tissues, which is an indication of vertical transmission. However, Wolbachia infection rates varied widely within a mosquito host species. There was no clear signal of cophylogeny between the mosquito hosts and the 12 putative Wolbachia strains observed in this study. Host shift events were also observed. Conclusions Our results suggest that the mosquito-Wolbachia relationship is complex and that combinations of transmission modes and multiple evolutionary events likely explain the observed distribution of Wolbachia diversity across mosquito hosts. These findings have implications for a better understanding of the diversity and ecology of Wolbachia and for their utility as biocontrol agents.
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Affiliation(s)
- Huicong Ding
- Department of Biological Sciences, National University of Singapore, 16 Science Drive 4, Singapore, 117558, Singapore
| | - Huiqing Yeo
- Department of Biological Sciences, National University of Singapore, 16 Science Drive 4, Singapore, 117558, Singapore
| | - Nalini Puniamoorthy
- Department of Biological Sciences, National University of Singapore, 16 Science Drive 4, Singapore, 117558, Singapore.
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7
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Sanaei E, Charlat S, Engelstädter J. Wolbachia
host shifts: routes, mechanisms, constraints and evolutionary consequences. Biol Rev Camb Philos Soc 2020; 96:433-453. [DOI: 10.1111/brv.12663] [Citation(s) in RCA: 29] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2020] [Revised: 10/18/2020] [Accepted: 10/20/2020] [Indexed: 12/31/2022]
Affiliation(s)
- Ehsan Sanaei
- School of Biological Sciences The University of Queensland Saint Lucia Brisbane QLD 4067 Australia
| | - Sylvain Charlat
- Laboratoire de Biométrie et Biologie Evolutive Université de Lyon, Université Lyon 1, CNRS, UMR 5558 43 boulevard du 11 novembre 1918 Villeurbanne F‐69622 France
| | - Jan Engelstädter
- School of Biological Sciences The University of Queensland Saint Lucia Brisbane QLD 4067 Australia
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Shropshire JD, Leigh B, Bordenstein SR. Symbiont-mediated cytoplasmic incompatibility: what have we learned in 50 years? eLife 2020; 9:61989. [PMID: 32975515 PMCID: PMC7518888 DOI: 10.7554/elife.61989] [Citation(s) in RCA: 74] [Impact Index Per Article: 18.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2020] [Accepted: 09/14/2020] [Indexed: 12/12/2022] Open
Abstract
Cytoplasmic incompatibility (CI) is the most common symbiont-induced reproductive manipulation. Specifically, symbiont-induced sperm modifications cause catastrophic mitotic defects in the fertilized embryo and ensuing lethality in crosses between symbiotic males and either aposymbiotic females or females harboring a different symbiont strain. However, if the female carries the same symbiont strain, then embryos develop properly, thereby imparting a relative fitness benefit to symbiont-transmitting mothers. Thus, CI drives maternally-transmitted bacteria to high frequencies in arthropods worldwide. In the past two decades, CI experienced a boom in interest due to its (i) deployment in worldwide efforts to curb mosquito-borne diseases, (ii) causation by bacteriophage genes, cifA and cifB, that modify sexual reproduction, and (iii) important impacts on arthropod speciation. This review serves as a gateway to experimental, conceptual, and quantitative themes of CI and outlines significant gaps in understanding CI’s mechanism that are ripe for investigation from diverse subdisciplines in the life sciences.
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Affiliation(s)
- J Dylan Shropshire
- Department of Biological Sciences, Vanderbilt University, Nashville, United States.,Vanderbilt Microbiome Initiative, Vanderbilt University, Nashville, United States
| | - Brittany Leigh
- Department of Biological Sciences, Vanderbilt University, Nashville, United States.,Vanderbilt Microbiome Initiative, Vanderbilt University, Nashville, United States
| | - Seth R Bordenstein
- Department of Biological Sciences, Vanderbilt University, Nashville, United States.,Vanderbilt Microbiome Initiative, Vanderbilt University, Nashville, United States.,Department of Pathology, Microbiology, and Immunology, Vanderbilt University, Nashville, United States.,Vanderbilt Institute for Infection, Immunology, and Inflammation, Vanderbilt University Medical Center, Nashville, United States
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9
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Martínez-Rodríguez P, Rolán-Alvarez E, Del Mar Pérez-Ruiz M, Arroyo-Yebras F, Carpena-Catoira C, Carvajal-Rodríguez A, Bella JL. Geographic and Temporal Variation of Distinct Intracellular Endosymbiont Strains of Wolbachia sp. in the Grasshopper Chorthippus parallelus: a Frequency-Dependent Mechanism? MICROBIAL ECOLOGY 2019; 77:1036-1047. [PMID: 30762095 DOI: 10.1007/s00248-019-01338-2] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/02/2018] [Accepted: 01/28/2019] [Indexed: 06/09/2023]
Abstract
Wolbachia is an intracellular endosymbiont that can produce a range of effects on host fitness, but the temporal dynamics of Wolbachia strains have rarely been experimentally evaluated. We compare interannual strain frequencies along a geographical region for understanding the forces that shape Wolbachia strain frequency in natural populations of its host, Chorthippus parallelus (Orthoptera, Acrididae). General linear models show that strain frequency changes significantly across geographical and temporal scales. Computer simulation allows to reject the compatibility of the observed patterns with either genetic drift or sampling errors. We use consecutive years to estimate total Wolbachia strain fitness. Our estimation of Wolbachia fitness is significant in most cases, within locality and between consecutive years, following a negatively frequency-dependent trend. Wolbachia spp. B and F strains show a temporal pattern of variation that is compatible with a negative frequency-dependent natural selection mechanism. Our results suggest that such a mechanism should be at least considered in future experimental and theoretical research strategies that attempt to understand Wolbachia biodiversity.
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Affiliation(s)
- Paloma Martínez-Rodríguez
- Departamento de Biología (Genética), Facultad de Ciencias, Universidad Autónoma de Madrid, 28049, Madrid, Spain
| | | | - M Del Mar Pérez-Ruiz
- Departamento de Biología (Genética), Facultad de Ciencias, Universidad Autónoma de Madrid, 28049, Madrid, Spain
| | - Francisca Arroyo-Yebras
- Departamento de Biología (Genética), Facultad de Ciencias, Universidad Autónoma de Madrid, 28049, Madrid, Spain
| | | | | | - José L Bella
- Departamento de Biología (Genética), Facultad de Ciencias, Universidad Autónoma de Madrid, 28049, Madrid, Spain.
- Centro de Investigación en Biodiversidad y Cambio Global (CIBC-UAM), Universidad Autónoma de Madrid, 28049, Madrid, Spain.
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