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Ljubešić Z, Mihanović H, Matek A, Mucko M, Achterberg EP, Omand M, Pestorić B, Lučić D, Čižmek H, Čolić B, Balestra C, Casotti R, Janeković I, Orlić M. Marine plankton community and net primary production responding to island-trapped waves in a stratified oligotrophic ecosystem. Heliyon 2024; 10:e37788. [PMID: 39323781 PMCID: PMC11422578 DOI: 10.1016/j.heliyon.2024.e37788] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2024] [Revised: 08/31/2024] [Accepted: 09/10/2024] [Indexed: 09/27/2024] Open
Abstract
The oligotrophic Adriatic Sea is characterized during a typical summer by low productivity caused by strong water column stratification, which inhibits vertical mixing and nutrient supply to the euphotic zone. These conditions can be disrupted by transient physical forcing, which enhances nutrient fluxes and creates localized hotspots of relatively high net primary production. In this study, plankton abundance and diversity were investigated in relation to the physical forcing and nutrient concentrations in an area affected by island-trapped waves (ITWs) near Lastovo Island (Adriatic Sea). The episodic ITW events resulted in enhanced uplift and vertical excursion of the thermocline, marked by anomalously higher nutrient concentrations and a corresponding increase in net primary production in the thermocline layer. Physicochemical properties explained 11.7 % (p = 0.002) of the variability in micro- and nanophytoplankton and 88.9 % (p = 0.001) in the picoplankton community. A significant response to the ITW phenomenon in the plankton community composition (p = 0.001) was observed for bacterioplankton. Among the identified amplicon sequence variances, primary producers were scarce and mainly represented cyanobacteria (Synechococcus strain CC9902), stramenopiles (Pelagomonas), and chlorophytes (Ostreococcus). The remaining amplicon sequence variances were assigned to the classes Copepoda, parasitic fungi (Meyerozyma spp.), mixotrophic dinoflagellates (family Peridiniales, mostly the genus Blastodinium), and parasitic Ciliophora (Scuticociliata). Bacterial ecological functions corresponded to chemoheterotrophic, degradation, and fermentation processes, whereas samples collected after the most intense ITW episode also showed abundant bacteria linked to microplastic degradation and parasitosis. These results highlight the ecological role of localized physical phenomena in enhancing nearshore primary productivity and fine shifts in plankton taxa in oligotrophic systems.
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Affiliation(s)
- Zrinka Ljubešić
- University of Zagreb, Faculty of Science, Department of Biology, Horvatovac 102A, 10000, Zagreb, Croatia
| | - Hrvoje Mihanović
- Institute of Oceanography and Fisheries, Šetalište I. Meštrovića 63, 21000, Split, Croatia
| | - Antonija Matek
- University of Zagreb, Faculty of Science, Department of Biology, Horvatovac 102A, 10000, Zagreb, Croatia
| | - Maja Mucko
- University of Zagreb, Faculty of Science, Department of Biology, Horvatovac 102A, 10000, Zagreb, Croatia
| | - Eric P. Achterberg
- GEOMAR Helmholtz Centre for Ocean Research, Kiel Wischhofstraße 1-3, D-24148, Kiel, Germany
| | - Melissa Omand
- University of Rhode Island, Graduate School of Oceanography, 215 South Ferry Rd, Narragansett, RI, 02882, USA
| | - Branka Pestorić
- University of Montenegro, Institute of Marine Biology, Put I Bokeljske brigade 68, 85330, Kotor, Montenegro
| | - Davor Lučić
- University of Dubrovnik, Institute for Marine and Coastal Research, Kneza Damjana Jude 12, 20000 Dubrovnik, Croatia
| | - Hrvoje Čižmek
- Marine Explorers Society 20.000 leagues, Put Bokanjca 26A, 23000, Zadar, Croatia
| | - Barbara Čolić
- Marine Explorers Society 20.000 leagues, Put Bokanjca 26A, 23000, Zadar, Croatia
| | - Cecilia Balestra
- National Institute of Oceanography and Applied Geophysics – OGS, Borgo Grotta Gigante 42/C, 34010 Sgonico (TS), Italy
| | - Raffaella Casotti
- Department of Integrative Marine Ecology, Stazione Zoologica Anton Dohrn, Villa Comunale, 80121, Naples, Italy
| | - Ivica Janeković
- Ocean Graduate School and the UWA Oceans Institute, The University of Western Australia, Cnr Fairway and Service Road 4, M470, Crawley, WA, 6009, Australia
- GEKOM (Geophysical and Ecological Modelling) Ltd, Fallerovo šetalište 22, 10000, Zagreb, Croatia
| | - Mirko Orlić
- University of Zagreb, Faculty of Science, Department of Geophysics, Horvatovac 95, 10000, Zagreb, Croatia
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Shi R, Han T, Qi Z, Huang H. Responses of attached bacterial communities to blooms of the swimming shelled pteropod Creseis acicula in Daya Bay, southern China. FEMS Microbiol Ecol 2024; 100:fiae034. [PMID: 38521983 PMCID: PMC11163984 DOI: 10.1093/femsec/fiae034] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2023] [Revised: 02/29/2024] [Accepted: 03/15/2024] [Indexed: 03/25/2024] Open
Abstract
The shelled pteropod Creseis acicula is a marine pelagic shellfish widely distributed from temperate to tropical seas around the world. From June to July 2020, a C. acicula bloom first happened in the Daya Bay, southern China, and its density reached the highest value (5600 ind. m-3) ever recorded around the world. However, few studies have investigated the responses of bacterial communities to the C. acicula bloom. In the present study, we examined the community profiles of three communities of bacteria including the free-living and particle-attached bacteria in the blooming and reference waters, and bacteria attached to the whole body and shell of C. acicula using a high-throughput sequencing method. The results indicated that the C. acicula bloom had a greater impact on particle-attached bacteria than free-living bacteria. Among the bloom-sensitive particle-attached bacteria, the predominant bacterial phyla were Pseudomonadota, Bacteroidota and Verrucomicrobiota in the blooming areas, whereas they were Actinomycetota and Planctomycetota in the reference areas. Specifically, fecal bacteria Haloferula and Halioglobus spp. were significantly enriched in the blooming waters and accumulated on C. acicula shells. Conversely, the significantly lower relative abundance of Nocardioides sp. in the blooming area and accumulated on the whole body of C. acicula indicated their attachment to particles consumed by C. acicula. Overall, our results suggested that the C. acicula bloom influenced marine bacteria, particularly particle-attached bacteria, by increasing (e.g. providing shells and feces) or decreasing (e.g. filter-feeding the suspended particles) the abundance of available substances.
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Affiliation(s)
- Rongjun Shi
- Guangdong Provincial Key Laboratory of Fishery Ecology and Environment, Key Laboratory of Open-Sea Fishery Development, Ministry of Agriculture and Rural Affairs of China, South China Sea Fisheries Research Institute, Chinese Academy of Fishery Science, Guangzhou 510300, China
| | - Tingting Han
- Guangdong Provincial Key Laboratory of Fishery Ecology and Environment, Key Laboratory of Open-Sea Fishery Development, Ministry of Agriculture and Rural Affairs of China, South China Sea Fisheries Research Institute, Chinese Academy of Fishery Science, Guangzhou 510300, China
| | - Zhanhui Qi
- Guangdong Provincial Key Laboratory of Fishery Ecology and Environment, Key Laboratory of Open-Sea Fishery Development, Ministry of Agriculture and Rural Affairs of China, South China Sea Fisheries Research Institute, Chinese Academy of Fishery Science, Guangzhou 510300, China
| | - Honghui Huang
- Guangdong Provincial Key Laboratory of Fishery Ecology and Environment, Key Laboratory of Open-Sea Fishery Development, Ministry of Agriculture and Rural Affairs of China, South China Sea Fisheries Research Institute, Chinese Academy of Fishery Science, Guangzhou 510300, China
- Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou 511458, China
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Ohdera AH, Mansbridge M, Wang M, Naydenkov P, Kamel B, Goentoro L. The microbiome of a Pacific moon jellyfish Aurelia coerulea. PLoS One 2024; 19:e0298002. [PMID: 38635587 PMCID: PMC11025843 DOI: 10.1371/journal.pone.0298002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2023] [Accepted: 01/16/2024] [Indexed: 04/20/2024] Open
Abstract
The impact of microbiome in animal physiology is well appreciated, but characterization of animal-microbe symbiosis in marine environments remains a growing need. This study characterizes the microbial communities associated with the moon jellyfish Aurelia coerulea, first isolated from the East Pacific Ocean and has since been utilized as an experimental system. We find that the microbiome of this Pacific Aurelia culture is dominated by two taxa, a Mollicutes and Rickettsiales. The microbiome is stable across life stages, although composition varies. Mining the host sequencing data, we assembled the bacterial metagenome-assembled genomes (MAGs). The bacterial MAGs are highly reduced, and predict a high metabolic dependence on the host. Analysis using multiple metrics suggest that both bacteria are likely new species. We therefore propose the names Ca. Mariplasma lunae (Mollicutes) and Ca. Marinirickettsia aquamalans (Rickettsiales). Finally, comparison with studies of Aurelia from other geographical populations suggests the association with Ca. Mariplasma lunae occurs in Aurelia from multiple geographical locations. The low-diversity microbiome of Aurelia provides a relatively simple system to study host-microbe interactions.
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Affiliation(s)
- Aki H. Ohdera
- Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, United States of America
- National Museum of Natural History, Smithsonian Institute, Washington, D.C., United States of America
| | | | - Matthew Wang
- Flintridge Preparatory School, La Cañada Flintridge, CA, United States of America
| | - Paulina Naydenkov
- Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, United States of America
| | - Bishoy Kamel
- US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, United States of America
| | - Lea Goentoro
- Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, United States of America
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Peng S, Ye L, Li Y, Wang F, Sun T, Wang L, Zhao J, Dong Z. Metagenomic insights into jellyfish-associated microbiome dynamics during strobilation. ISME COMMUNICATIONS 2024; 4:ycae036. [PMID: 38571744 PMCID: PMC10988111 DOI: 10.1093/ismeco/ycae036] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/01/2024] [Revised: 03/08/2024] [Accepted: 03/13/2024] [Indexed: 04/05/2024]
Abstract
Host-associated microbiomes can play key roles in the metamorphosis of animals. Most scyphozoan jellyfish undergo strobilation in their life cycles, similar to metamorphosis in classic bilaterians. The exploration of jellyfish microbiomes may elucidate the ancestral mechanisms and evolutionary trajectories of metazoan-microbe associations and interactions during metamorphosis. However, current knowledge of the functional features of jellyfish microbiomes remains limited. Here, we performed a genome-centric analysis of associated microbiota across four successive life stages (polyp, early strobila, advanced strobila, and ephyra) during strobilation in the common jellyfish Aurelia coerulea. We observed shifts in taxonomic and functional diversity of microbiomes across distinct stages and proposed that the low microbial diversity in ephyra stage may be correlated with the high expression of the host-derived antimicrobial peptide aurelin. Furthermore, we recovered 43 high-quality metagenome-assembled genomes and determined the nutritional potential of the dominant Vibrio members. Interestingly, we observed increased abundances of genes related to the biosynthesis of amino acids, vitamins, and cofactors, as well as carbon fixation during the loss of host feeding ability, indicating the functional potential of Aurelia-associated microbiota to support the synthesis of essential nutrients. We also identified several potential mechanisms by which jellyfish-associated microbes establish stage-specific community structures and maintain stable colonization in dynamic host environments, including eukaryotic-like protein production, bacterial secretion systems, restriction-modification systems, and clustered regularly interspaced short palindromic repeats-Cas systems. Our study characterizes unique taxonomic and functional changes in jellyfish microbiomes during strobilation and provides foundations for uncovering the ancestral mechanism of host-microbe interactions during metamorphosis.
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Affiliation(s)
- Saijun Peng
- Muping Coastal Environment Research Station, Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences, Yantai, Shandong 264003, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Lijing Ye
- Muping Coastal Environment Research Station, Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences, Yantai, Shandong 264003, China
| | - Yongxue Li
- Muping Coastal Environment Research Station, Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences, Yantai, Shandong 264003, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Fanghan Wang
- Muping Coastal Environment Research Station, Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences, Yantai, Shandong 264003, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Tingting Sun
- Muping Coastal Environment Research Station, Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences, Yantai, Shandong 264003, China
| | - Lei Wang
- Muping Coastal Environment Research Station, Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences, Yantai, Shandong 264003, China
| | - Jianmin Zhao
- Muping Coastal Environment Research Station, Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences, Yantai, Shandong 264003, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Zhijun Dong
- Muping Coastal Environment Research Station, Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences, Yantai, Shandong 264003, China
- University of Chinese Academy of Sciences, Beijing 100049, China
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Combined Effects of Temperature and Salinity on Polyps and Ephyrae of Aurelia solida (Cnidaria: Scyphozoa). DIVERSITY 2021. [DOI: 10.3390/d13110573] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Jellyfish outbreaks are conspicuous natural events in marine ecosystems that have a substantial impact on the structure and dynamics of marine ecosystems and different economic sectors of human activities. Understanding the life cycle strategies of jellyfish species is therefore critical to mitigate the impacts these organisms may have. In this context, the present study investigated the effect of different temperature and salinity regimes on the rearing success of the jellyfish Aurelia solida in microcosm experiments on two different life stages: polyps and ephyrae. Polyps showed high survival rates across the different conditions (except at 28 °C/20 psu) and reproduced asexually in all combinations, with the highest budding activity at 20 °C and 30 psu. Strobilation occurred mainly at 16 °C and 35 psu. Although ephyra survival was highest at low salinities (20 psu) and lower temperatures (10 and 15 °C), the highest growth rates were reached at intermediate temperatures (20 °C). The comparison to other Aurelia species underlines the differences between even closely related species. Given the high tolerance capacity that A. solida presented in the experiments, the species has the potential to cope well under current climate change scenarios and possibly adapt successfully to other regions and ecosystems.
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