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Paredes-Galarza B, Oliveira MT, Timm FB, Stone NV, Violet-Lozano L, Salvato RS, Müller ND, Prandi BA, Gasparetto R, Gonçalves M, Teixeira MAS, Moura MAO, Riet-Correa G, Cerqueira VD, Bezerra PS, Campos FS, Franco AC, Roehe PM. Bovine Alphaherpesvirus 1, Bovine Alphaherpesvirus 5 and Bubaline Alphaherpesvirus 1 in Palatine Tonsils from Water Buffaloes in Northern Brazil and Possible Links with the Origin of Bovine Alphaherpesvirus Type 5. Viruses 2024; 16:1024. [PMID: 39066187 PMCID: PMC11281340 DOI: 10.3390/v16071024] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2024] [Revised: 06/06/2024] [Accepted: 06/24/2024] [Indexed: 07/28/2024] Open
Abstract
Herpesviruses are significant pathogens of ruminants. In water buffaloes (Bubalus bubalis), however, herpesviruses have not been thoroughly studied. Although bubaline alphaherpesvirus 1 (BuAHV1) and bovine alphaherpesvirus 1 (BoAHV1) have already been recovered from water buffaloes, to date, no reports on the occurrence of bovine alphaherpesvirus 5 (BoAHV5) in these animals have been published. Therefore, the aim of this study was to search for BuAHV1, BoAHV1, and BoAHV5 in palatine tonsils of apparently healthy water buffaloes from the Pará state, Northern Brazil. Tissue samples of tonsils (n = 293) were screened by a nested PCR (nPCR) targeting a region of UL44 (gC coding gene), followed by sequencing, to detect and differentiate between the viral types. Viral genome segments were detected in 18 out of 293 (6.1%) of the palatine tonsil samples. Two animals carried genomes of BoAHV1 only, eleven animals carried BoAHV5 genomes only, and four animals carried BuAHV1 only. Another animal had both BoAHV1 and BoAHV5 genomes in its tonsils. No infectious virus could be recovered from any of the samples. The BuAHV1 sequences identified here were more closely related to BuAHV1 genomes identified in India. Phylogenetic analyses suggested a closer relationship between the recovered BoAHV5 and BuAHV1 genomes. Therefore, evidence is provided here to confirm that not only BoAHV1 and BuAHV1, but also BoAHV5, can infect water buffaloes. This report highlights (i) the first detection of BoAHV5 in water buffaloes and (ii) the occurrence of coinfections with BoAHV1 and BoAHV5 in that species. Such findings and the similarity of BoAHV5 to Indian herpesvirus genomes suggest that the origin of type 5 may be linked to recombinations between bovine and bubaline herpesviruses within bubalines, since the scenario for generation of recombinants in buffaloes is potentially present.
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Affiliation(s)
- Bruna Paredes-Galarza
- Laboratório de Virologia, Departamento de Microbiologia, Imunologia e Parasitologia, Instituto de Ciências Básicas da Saúde, Universidade Federal do Rio Grande do Sul, Rua Ramiro Barcelos, 2600, Porto Alegre CEP 90035-003, RS, Brazil; (B.P.-G.); (N.V.S.)
| | - Martha T. Oliveira
- Laboratório de Virologia, Departamento de Microbiologia, Imunologia e Parasitologia, Instituto de Ciências Básicas da Saúde, Universidade Federal do Rio Grande do Sul, Rua Ramiro Barcelos, 2600, Porto Alegre CEP 90035-003, RS, Brazil; (B.P.-G.); (N.V.S.)
| | - Francine B. Timm
- Laboratório de Virologia, Departamento de Microbiologia, Imunologia e Parasitologia, Instituto de Ciências Básicas da Saúde, Universidade Federal do Rio Grande do Sul, Rua Ramiro Barcelos, 2600, Porto Alegre CEP 90035-003, RS, Brazil; (B.P.-G.); (N.V.S.)
| | - Nicole V. Stone
- Laboratório de Virologia, Departamento de Microbiologia, Imunologia e Parasitologia, Instituto de Ciências Básicas da Saúde, Universidade Federal do Rio Grande do Sul, Rua Ramiro Barcelos, 2600, Porto Alegre CEP 90035-003, RS, Brazil; (B.P.-G.); (N.V.S.)
| | - Lina Violet-Lozano
- Laboratório de Virologia, Departamento de Microbiologia, Imunologia e Parasitologia, Instituto de Ciências Básicas da Saúde, Universidade Federal do Rio Grande do Sul, Rua Ramiro Barcelos, 2600, Porto Alegre CEP 90035-003, RS, Brazil; (B.P.-G.); (N.V.S.)
| | - Richard S. Salvato
- Centro de Desenvolvimento Científico e Tecnológico (CDCT), Centro Estadual de Vigilância em Saúde (CEVS) da Secretaria Estadual da Saúde do Rio Grande do Sul (SESRS), Porto Alegre CEP 90450-190, RS, Brazil
| | - Nícolas D. Müller
- Laboratório de Virologia, Departamento de Microbiologia, Imunologia e Parasitologia, Instituto de Ciências Básicas da Saúde, Universidade Federal do Rio Grande do Sul, Rua Ramiro Barcelos, 2600, Porto Alegre CEP 90035-003, RS, Brazil; (B.P.-G.); (N.V.S.)
| | - Bruno A. Prandi
- Laboratório de Virologia, Departamento de Microbiologia, Imunologia e Parasitologia, Instituto de Ciências Básicas da Saúde, Universidade Federal do Rio Grande do Sul, Rua Ramiro Barcelos, 2600, Porto Alegre CEP 90035-003, RS, Brazil; (B.P.-G.); (N.V.S.)
| | - Raíssa Gasparetto
- Laboratório de Virologia, Departamento de Microbiologia, Imunologia e Parasitologia, Instituto de Ciências Básicas da Saúde, Universidade Federal do Rio Grande do Sul, Rua Ramiro Barcelos, 2600, Porto Alegre CEP 90035-003, RS, Brazil; (B.P.-G.); (N.V.S.)
| | - Michelen Gonçalves
- Laboratório de Virologia, Instituto de Pesquisas Veterinárias Desidério Finamor, Secretaria da Agricultura, Pecuária e Irrigação, Estrada do Conde, 6000, Eldorado do Sul CEP 92990-000, RS, Brazil
| | - María A. S. Teixeira
- Agência Estadual de Defesa Agropecuária do Estado do Pará (ADEPARÁ), Belém CEP 66080-008, PA, Brazil
| | - Márcio A. O. Moura
- Laboratório de Patologia Animal, Instituto de Medicina Veterinária, Universidade Federal do Pará (UFPA), Castanhal CEP 68740-970, PA, Brazil
| | - Gabriela Riet-Correa
- Laboratório de Patologia Animal, Instituto de Medicina Veterinária, Universidade Federal do Pará (UFPA), Castanhal CEP 68740-970, PA, Brazil
| | - Valíria D. Cerqueira
- Laboratório de Patologia Animal, Instituto de Medicina Veterinária, Universidade Federal do Pará (UFPA), Castanhal CEP 68740-970, PA, Brazil
| | - Pedro S. Bezerra
- Laboratório de Patologia Animal, Instituto de Medicina Veterinária, Universidade Federal do Pará (UFPA), Castanhal CEP 68740-970, PA, Brazil
| | - Fabrício S. Campos
- Laboratório de Virologia, Departamento de Microbiologia, Imunologia e Parasitologia, Instituto de Ciências Básicas da Saúde, Universidade Federal do Rio Grande do Sul, Rua Ramiro Barcelos, 2600, Porto Alegre CEP 90035-003, RS, Brazil; (B.P.-G.); (N.V.S.)
| | - Ana C. Franco
- Laboratório de Virologia, Departamento de Microbiologia, Imunologia e Parasitologia, Instituto de Ciências Básicas da Saúde, Universidade Federal do Rio Grande do Sul, Rua Ramiro Barcelos, 2600, Porto Alegre CEP 90035-003, RS, Brazil; (B.P.-G.); (N.V.S.)
| | - Paulo M. Roehe
- Laboratório de Virologia, Departamento de Microbiologia, Imunologia e Parasitologia, Instituto de Ciências Básicas da Saúde, Universidade Federal do Rio Grande do Sul, Rua Ramiro Barcelos, 2600, Porto Alegre CEP 90035-003, RS, Brazil; (B.P.-G.); (N.V.S.)
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Ma Y, Guo X, He Q, Liu L, Li Z, Zhao X, Gu W, Zhong Q, Li N, Yao G, Ma X. Integrated analysis of microRNA and messenger RNA expression profiles reveals functional microRNA in infectious bovine rhinotracheitis virus-induced mitochondrial damage in Madin-Darby bovine kidney cells. BMC Genomics 2024; 25:158. [PMID: 38331736 PMCID: PMC10851472 DOI: 10.1186/s12864-024-10042-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2023] [Accepted: 01/22/2024] [Indexed: 02/10/2024] Open
Abstract
BACKGROUND Studies have confirmed that Infectious bovine rhinotracheitis virus (IBRV) infection induces mitochondrial damage. MicroRNAs (miRNAs) are a class of noncoding RNA molecules, which are involved in various biological processes and pathological changes associated with mitochondrial damage. It is currently unclear whether miRNAs participate in IBRV-induced mitochondrial damage in Madin-Darby bovine kidney (MDBK) cells. RESULTS In the present study, we used high-throughput sequencing technology, Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis to screen for mitochondria-related miRNAs and messenger RNAs (mRNAs). In total, 279 differentially expressed miRNAs and 832 differentially expressed mRNAs were identified in 6 hours (IBRV1) versus 24 hours (IBRV2) after IBRV infection in MDBK cells. GO and KEGG enrichment analysis revealed that 42 differentially expressed mRNAs and 348 target genes of differentially expressed miRNAs were correlated with mitochondrial damage, and the miRNA-mitochondria-related target genes regulatory network was constructed to elucidate their potential regulatory relationships. Among the 10 differentially expressed miRNAs, 8 showed expression patterns consistent with the high-throughput sequencing results. Functional validation results showed that overexpression of miR-10a and miR-182 aggravated mitochondrial damage, while inhibition of miR-10a and miR-182 alleviated mitochondrial damage. CONCLUSIONS This study not only revealed the expression changes of miRNAs and mRNAs in IBRV-infected MDBK cells, but also revealed possible biological regulatory relationship between them. MiR-10a and miR-182 may have the potential to be developed as biomarkers for the diagnosis and treatment of IBRV. Together, Together, these data and analyses provide additional insights into the roles of miRNA and mRNA in IBRV-induced mitochondria damage.
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Affiliation(s)
- Yingcai Ma
- College of Veterinary Medicine, Xinjiang Agricultural University, Urumqi, 830052, China
- Xinjiang key Laboratory of New Drug Study and Creation for Herbivorous Animal (XJ-KLNDSCHA), Xinjiang Agricultural University, Urumqi, 830052, China
| | - Xueping Guo
- College of Veterinary Medicine, Xinjiang Agricultural University, Urumqi, 830052, China
- Xinjiang key Laboratory of New Drug Study and Creation for Herbivorous Animal (XJ-KLNDSCHA), Xinjiang Agricultural University, Urumqi, 830052, China
| | - Qin He
- College of Veterinary Medicine, Xinjiang Agricultural University, Urumqi, 830052, China
- Xinjiang key Laboratory of New Drug Study and Creation for Herbivorous Animal (XJ-KLNDSCHA), Xinjiang Agricultural University, Urumqi, 830052, China
| | - Lu Liu
- College of Veterinary Medicine, Xinjiang Agricultural University, Urumqi, 830052, China
- Xinjiang key Laboratory of New Drug Study and Creation for Herbivorous Animal (XJ-KLNDSCHA), Xinjiang Agricultural University, Urumqi, 830052, China
| | - Zelong Li
- College of Veterinary Medicine, Xinjiang Agricultural University, Urumqi, 830052, China
- Xinjiang key Laboratory of New Drug Study and Creation for Herbivorous Animal (XJ-KLNDSCHA), Xinjiang Agricultural University, Urumqi, 830052, China
| | - Xiaomin Zhao
- College of Veterinary Medicine, Northwest A & F University, Yangling, 712100, China
| | - Wenxi Gu
- Institute of Animal Science, Xinjiang Academy of Animal Sciences, Urumqi, 830011, China
| | - Qi Zhong
- Institute of Animal Science, Xinjiang Academy of Animal Sciences, Urumqi, 830011, China
| | - Na Li
- College of Veterinary Medicine, Xinjiang Agricultural University, Urumqi, 830052, China
- Xinjiang key Laboratory of New Drug Study and Creation for Herbivorous Animal (XJ-KLNDSCHA), Xinjiang Agricultural University, Urumqi, 830052, China
| | - Gang Yao
- College of Veterinary Medicine, Xinjiang Agricultural University, Urumqi, 830052, China.
- Xinjiang key Laboratory of New Drug Study and Creation for Herbivorous Animal (XJ-KLNDSCHA), Xinjiang Agricultural University, Urumqi, 830052, China.
| | - Xuelian Ma
- College of Veterinary Medicine, Xinjiang Agricultural University, Urumqi, 830052, China.
- Xinjiang key Laboratory of New Drug Study and Creation for Herbivorous Animal (XJ-KLNDSCHA), Xinjiang Agricultural University, Urumqi, 830052, China.
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Petrini S, Curini V, Righi C, Cammà C, Di Lollo V, Tinelli E, Mincarelli LF, Rossi E, Costantino G, Secondini B, Pirani S, Giammarioli M, Feliziani F. Genomic Characterization of a Wild-Type Bovine alphaherpesvirus 1 (BoAHV-1) Strain Isolated in an Outbreak in Central Italy. Viruses 2024; 16:150. [PMID: 38275960 PMCID: PMC10818397 DOI: 10.3390/v16010150] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2023] [Revised: 01/11/2024] [Accepted: 01/17/2024] [Indexed: 01/27/2024] Open
Abstract
Bovine alphaherpesvirus-1 (BoAHV-1) infection is common in cattle worldwide. However, information on the spread of BoAHV-1-circulating strains in Italy remains limited. In this study, we investigated an outbreak characterized by severe respiratory symptoms in a cattle herd (n = 30) located in Central Italy. BoAHV-1 was isolated from three cattle in a cell culture, which confirmed viral infection. Next, we characterized one (16453/07 TN) of the three isolates of BoAHV-1 using whole-genome sequencing. BLASTn and phylogenetic analysis revealed a nucleotide identity >99% with all BoAHV-1 strains belonging to subtype 1.1, highlighting the genetic stability of the virus. This study reports the first full genomic characterization of a BoAHV-1 isolate in Italy, enriching our understanding of the genetic characteristics of the circulating BoAHV-1 strain in Italy.
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Affiliation(s)
- Stefano Petrini
- National Reference Centre for Infectious Bovine Rhinotracheitis (IBR), Istituto Zooprofilattico Sperimentale Umbria-Marche “Togo Rosati”, 06126 Perugia, Italy; (S.P.); (E.T.); (E.R.); (G.C.); (S.P.); (M.G.); (F.F.)
| | - Valentina Curini
- National Reference Center for Whole Genome Sequencing of Microbial Pathogens, Istituto Zooprofilattico Sperimentale Abruzzo-Molise “G. Caporale”, 64100 Teramo, Italy; (V.C.); (C.C.); (V.D.L.); (L.F.M.); (B.S.)
| | - Cecilia Righi
- National Reference Centre for Infectious Bovine Rhinotracheitis (IBR), Istituto Zooprofilattico Sperimentale Umbria-Marche “Togo Rosati”, 06126 Perugia, Italy; (S.P.); (E.T.); (E.R.); (G.C.); (S.P.); (M.G.); (F.F.)
| | - Cesare Cammà
- National Reference Center for Whole Genome Sequencing of Microbial Pathogens, Istituto Zooprofilattico Sperimentale Abruzzo-Molise “G. Caporale”, 64100 Teramo, Italy; (V.C.); (C.C.); (V.D.L.); (L.F.M.); (B.S.)
| | - Valeria Di Lollo
- National Reference Center for Whole Genome Sequencing of Microbial Pathogens, Istituto Zooprofilattico Sperimentale Abruzzo-Molise “G. Caporale”, 64100 Teramo, Italy; (V.C.); (C.C.); (V.D.L.); (L.F.M.); (B.S.)
| | - Elena Tinelli
- National Reference Centre for Infectious Bovine Rhinotracheitis (IBR), Istituto Zooprofilattico Sperimentale Umbria-Marche “Togo Rosati”, 06126 Perugia, Italy; (S.P.); (E.T.); (E.R.); (G.C.); (S.P.); (M.G.); (F.F.)
| | - Luana Fiorella Mincarelli
- National Reference Center for Whole Genome Sequencing of Microbial Pathogens, Istituto Zooprofilattico Sperimentale Abruzzo-Molise “G. Caporale”, 64100 Teramo, Italy; (V.C.); (C.C.); (V.D.L.); (L.F.M.); (B.S.)
| | - Elisabetta Rossi
- National Reference Centre for Infectious Bovine Rhinotracheitis (IBR), Istituto Zooprofilattico Sperimentale Umbria-Marche “Togo Rosati”, 06126 Perugia, Italy; (S.P.); (E.T.); (E.R.); (G.C.); (S.P.); (M.G.); (F.F.)
| | - Giulia Costantino
- National Reference Centre for Infectious Bovine Rhinotracheitis (IBR), Istituto Zooprofilattico Sperimentale Umbria-Marche “Togo Rosati”, 06126 Perugia, Italy; (S.P.); (E.T.); (E.R.); (G.C.); (S.P.); (M.G.); (F.F.)
| | - Barbara Secondini
- National Reference Center for Whole Genome Sequencing of Microbial Pathogens, Istituto Zooprofilattico Sperimentale Abruzzo-Molise “G. Caporale”, 64100 Teramo, Italy; (V.C.); (C.C.); (V.D.L.); (L.F.M.); (B.S.)
| | - Silvia Pirani
- National Reference Centre for Infectious Bovine Rhinotracheitis (IBR), Istituto Zooprofilattico Sperimentale Umbria-Marche “Togo Rosati”, 06126 Perugia, Italy; (S.P.); (E.T.); (E.R.); (G.C.); (S.P.); (M.G.); (F.F.)
| | - Monica Giammarioli
- National Reference Centre for Infectious Bovine Rhinotracheitis (IBR), Istituto Zooprofilattico Sperimentale Umbria-Marche “Togo Rosati”, 06126 Perugia, Italy; (S.P.); (E.T.); (E.R.); (G.C.); (S.P.); (M.G.); (F.F.)
| | - Francesco Feliziani
- National Reference Centre for Infectious Bovine Rhinotracheitis (IBR), Istituto Zooprofilattico Sperimentale Umbria-Marche “Togo Rosati”, 06126 Perugia, Italy; (S.P.); (E.T.); (E.R.); (G.C.); (S.P.); (M.G.); (F.F.)
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Nautiyal S, Nandi S, Sharma K, Gairola V, Sai Balaji KG, Biswas SK, Agrawal R, Mahajan S, Singh KP, Sharma GK. Development and evaluation of recombinant gD protein based ELISA for sero-surveillance of BoHV-1 in India. Biologicals 2023; 84:101720. [PMID: 37944302 DOI: 10.1016/j.biologicals.2023.101720] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2023] [Revised: 10/17/2023] [Accepted: 10/23/2023] [Indexed: 11/12/2023] Open
Abstract
Bovine herpes virus-1 (BoHV-1) is responsible for production losses through decreased milk yields, abortions, infertility, and trade restrictions in the bovine population. The disease is endemic in many countries including India. As the virus harbors a unique feature of latency animals once infected with the virus remain sero-positive for lifetime and can re-excrete the virus when exposed to stressful conditions. Hence, identification and culling of infected animals is only the means to minimize infection-associated losses. In this study, an economical indigenous assay for the detection of BoHV-1 specific antibodies was developed to cater to the huge bovine population of the country. The viral structural gD protein, expressed in the prokaryotic system was used for optimization of an indirect ELISA for bovines followed by statistical validation of the assay. The diagnostic sensitivity and specificity of the indirect ELISA were 82.9% and 91.3% respectively. Systematically collected serum samples representing organized, unorganized and breeding farms of India were tested with the indigenously developed assay for further validation.
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Affiliation(s)
- Sushmita Nautiyal
- CADRAD, ICAR-Indian Veterinary Research Institute, Izatnagar, Bareilly, U.P., 243122, India
| | - Sukdeb Nandi
- CADRAD, ICAR-Indian Veterinary Research Institute, Izatnagar, Bareilly, U.P., 243122, India
| | - Kirtika Sharma
- Center for Wildlife, ICAR-Indian Veterinary Research Institute, Izatnagar, Bareilly, U.P., India
| | - Vivek Gairola
- CADRAD, ICAR-Indian Veterinary Research Institute, Izatnagar, Bareilly, U.P., 243122, India
| | - K G Sai Balaji
- CADRAD, ICAR-Indian Veterinary Research Institute, Izatnagar, Bareilly, U.P., 243122, India
| | - Sanchay Kumar Biswas
- CADRAD, ICAR-Indian Veterinary Research Institute, Izatnagar, Bareilly, U.P., 243122, India
| | - Ravikant Agrawal
- Division of Biological Products, ICAR-Indian Veterinary Research Institute, Izatnagar, Bareilly, U.P., India
| | - Sonalika Mahajan
- Division of Biological Standardization, ICAR-Indian Veterinary Research Institute, Bareilly, U.P., 243122, India
| | - Karam Pal Singh
- CADRAD, ICAR-Indian Veterinary Research Institute, Izatnagar, Bareilly, U.P., 243122, India
| | - Gaurav Kumar Sharma
- CADRAD, ICAR-Indian Veterinary Research Institute, Izatnagar, Bareilly, U.P., 243122, India.
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