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Deng Y, Wang JX, Ghosh B, Lu Y. Enzymatic CO 2 reduction catalyzed by natural and artificial Metalloenzymes. J Inorg Biochem 2024; 259:112669. [PMID: 39059175 DOI: 10.1016/j.jinorgbio.2024.112669] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2024] [Revised: 07/04/2024] [Accepted: 07/17/2024] [Indexed: 07/28/2024]
Abstract
The continuously increasing level of atmospheric CO2 in the atmosphere has led to global warming. Converting CO2 into other carbon compounds could mitigate its atmospheric levels and produce valuable products, as CO2 also serves as a plentiful and inexpensive carbon feedstock. However, the inert nature of CO2 poses a major challenge for its reduction. To meet the challenge, nature has evolved metalloenzymes using transition metal ions like Fe, Ni, Mo, and W, as well as electron-transfer partners for their functions. Mimicking these enzymes, artificial metalloenzymes (ArMs) have been designed using alternative protein scaffolds and various metallocofactors like Ni, Co, Re, Rh, and FeS clusters. Both the catalytic efficiency and the scope of CO2-reduction product of these ArMs have been improved over the past decade. This review first focuses on the natural metalloenzymes that directly reduce CO2 by discussing their structures and active sites, as well as the proposed reaction mechanisms. It then introduces the common strategies for electrochemical, photochemical, or photoelectrochemical utilization of these native enzymes for CO2 reduction and highlights the most recent advancements from the past five years. We also summarize principles of protein design for bio-inspired ArMs, comparing them with native enzymatic systems and outlining challenges and opportunities in enzymatic CO2 reduction.
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Affiliation(s)
- Yunling Deng
- Department of Chemistry, The University of Texas at Austin, Austin, TX 78712, United States of America
| | - Jing-Xiang Wang
- Department of Chemistry, The University of Texas at Austin, Austin, TX 78712, United States of America
| | - Barshali Ghosh
- Department of Chemistry, The University of Texas at Austin, Austin, TX 78712, United States of America
| | - Yi Lu
- Department of Chemistry, The University of Texas at Austin, Austin, TX 78712, United States of America.
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Terholsen H, Huerta-Zerón HD, Möller C, Junge H, Beller M, Bornscheuer UT. Photocatalytic CO 2 Reduction Using CO 2-Binding Enzymes. Angew Chem Int Ed Engl 2024; 63:e202319313. [PMID: 38324458 DOI: 10.1002/anie.202319313] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2023] [Revised: 02/06/2024] [Accepted: 02/06/2024] [Indexed: 02/09/2024]
Abstract
Novel concepts to utilize carbon dioxide are required to reach a circular carbon economy and minimize environmental issues. To achieve these goals, photo-, electro-, thermal-, and biocatalysis are key tools to realize this, preferentially in aqueous solutions. Nevertheless, catalytic systems that operate efficiently in water are scarce. Here, we present a general strategy for the identification of enzymes suitable for CO2 reduction based on structural analysis for potential carbon dioxide binding sites and subsequent mutations. We discovered that the phenolic acid decarboxylase from Bacillus subtilis (BsPAD) promotes the aqueous photocatalytic CO2 reduction selectively to carbon monoxide in the presence of a ruthenium photosensitizer and sodium ascorbate. With engineered variants of BsPAD, TONs of up to 978 and selectivities of up to 93 % (favoring the desired CO over H2 generation) were achieved. Mutating the active site region of BsPAD further improved turnover numbers for CO generation. This also revealed that electron transfer is rate-limiting and occurs via multistep tunneling. The generality of this approach was proven by using eight other enzymes, all showing the desired activity underlining that a range of proteins is capable of photocatalytic CO2 reduction.
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Affiliation(s)
- Henrik Terholsen
- Institute of Biochemistry, Department of Biotechnology and Enzyme Catalysis, University of Greifswald, Felix-Hausdorff-Straße 4, 17487, Greifswald, Germany
| | | | - Christina Möller
- Institute of Biochemistry, Department of Biotechnology and Enzyme Catalysis, University of Greifswald, Felix-Hausdorff-Straße 4, 17487, Greifswald, Germany
| | - Henrik Junge
- Leibniz Institute for Catalysis e.V., Albert-Einstein-Straße 29a, 18059, Rostock, Germany
| | - Matthias Beller
- Leibniz Institute for Catalysis e.V., Albert-Einstein-Straße 29a, 18059, Rostock, Germany
| | - Uwe T Bornscheuer
- Institute of Biochemistry, Department of Biotechnology and Enzyme Catalysis, University of Greifswald, Felix-Hausdorff-Straße 4, 17487, Greifswald, Germany
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Machín A, Cotto M, Ducongé J, Márquez F. Artificial Photosynthesis: Current Advancements and Future Prospects. Biomimetics (Basel) 2023; 8:298. [PMID: 37504186 PMCID: PMC10807655 DOI: 10.3390/biomimetics8030298] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2023] [Revised: 07/01/2023] [Accepted: 07/07/2023] [Indexed: 07/29/2023] Open
Abstract
Artificial photosynthesis is a technology with immense potential that aims to emulate the natural photosynthetic process. The process of natural photosynthesis involves the conversion of solar energy into chemical energy, which is stored in organic compounds. Catalysis is an essential aspect of artificial photosynthesis, as it facilitates the reactions that convert solar energy into chemical energy. In this review, we aim to provide an extensive overview of recent developments in the field of artificial photosynthesis by catalysis. We will discuss the various catalyst types used in artificial photosynthesis, including homogeneous catalysts, heterogeneous catalysts, and biocatalysts. Additionally, we will explore the different strategies employed to enhance the efficiency and selectivity of catalytic reactions, such as the utilization of nanomaterials, photoelectrochemical cells, and molecular engineering. Lastly, we will examine the challenges and opportunities of this technology as well as its potential applications in areas such as renewable energy, carbon capture and utilization, and sustainable agriculture. This review aims to provide a comprehensive and critical analysis of state-of-the-art methods in artificial photosynthesis by catalysis, as well as to identify key research directions for future advancements in this field.
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Affiliation(s)
- Abniel Machín
- Divisionof Natural Sciences and Technology, Universidad Ana G. Méndez-Cupey Campus, San Juan, PR 00926, USA
| | - María Cotto
- Nanomaterials Research Group, Department of Natural Sciences and Technology, Universidad Ana G. Méndez-Gurabo Campus, Gurabo, PR 00778, USA; (M.C.); (J.D.)
| | - José Ducongé
- Nanomaterials Research Group, Department of Natural Sciences and Technology, Universidad Ana G. Méndez-Gurabo Campus, Gurabo, PR 00778, USA; (M.C.); (J.D.)
| | - Francisco Márquez
- Nanomaterials Research Group, Department of Natural Sciences and Technology, Universidad Ana G. Méndez-Gurabo Campus, Gurabo, PR 00778, USA; (M.C.); (J.D.)
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Deng Y, Dwaraknath S, Ouyang WO, Matsumoto CJ, Ouchida S, Lu Y. Engineering an Oxygen-Binding Protein for Photocatalytic CO 2 Reductions in Water. Angew Chem Int Ed Engl 2023; 62:e202215719. [PMID: 36916067 PMCID: PMC10946749 DOI: 10.1002/anie.202215719] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2022] [Revised: 03/10/2023] [Accepted: 03/10/2023] [Indexed: 03/16/2023]
Abstract
While native CO2 -reducing enzymes display remarkable catalytic efficiency and product selectivity, few artificial biocatalysts have been engineered to allow understanding how the native enzymes work. To address this issue, we report cobalt porphyrin substituted myoglobin (CoMb) as a homogeneous catalyst for photo-driven CO2 to CO conversion in water. The activity and product selectivity were optimized by varying pH and concentrations of the enzyme and the photosensitizer. Up to 2000 TON(CO) was attained at low enzyme concentrations with low product selectivity (15 %), while a product selectivity of 74 % was reached by increasing the enzyme loading but with a compromised TON(CO). The efficiency of CO generation and overall TON(CO) were further improved by introducing positively charged residues (Lys or Arg) near the active stie of CoMb, which demonstrates the value of tuning the enzyme secondary coordination sphere to enhance the CO2 -reducing performance of a protein-based photocatalytic system.
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Affiliation(s)
- Yunling Deng
- Department of ChemistryUniversity of Texas at AustinAustinTX 78712USA
| | - Sudharsan Dwaraknath
- Department of ChemistryUniversity of Illinois at Urbana-ChampaignUrbanaIL 61801USA
| | - Wenhao O. Ouyang
- Department of ChemistryUniversity of Illinois at Urbana-ChampaignUrbanaIL 61801USA
| | - Cory J. Matsumoto
- Department of ChemistryUniversity of Illinois at Urbana-ChampaignUrbanaIL 61801USA
| | - Stephanie Ouchida
- Department of ChemistryUniversity of Illinois at Urbana-ChampaignUrbanaIL 61801USA
| | - Yi Lu
- Department of ChemistryUniversity of Texas at AustinAustinTX 78712USA
- Department of ChemistryUniversity of Illinois at Urbana-ChampaignUrbanaIL 61801USA
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Salamatian AA, Bren KL. Bioinspired and biomolecular catalysts for energy conversion and storage. FEBS Lett 2023; 597:174-190. [PMID: 36331366 DOI: 10.1002/1873-3468.14533] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2022] [Revised: 10/25/2022] [Accepted: 10/26/2022] [Indexed: 11/06/2022]
Abstract
Metalloenzymes are remarkable for facilitating challenging redox transformations with high efficiency and selectivity. In the area of alternative energy, scientists aim to capture these properties in bioinspired and engineered biomolecular catalysts for the efficient and fast production of fuels from low-energy feedstocks such as water and carbon dioxide. In this short review, efforts to mimic biological catalysts for proton reduction and carbon dioxide reduction are highlighted. Two important recurring themes are the importance of the microenvironment of the catalyst active site and the key role of proton delivery to the active site in achieving desired reactivity. Perspectives on ongoing and future challenges are also provided.
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Affiliation(s)
| | - Kara L Bren
- Department of Chemistry, University of Rochester, NY, USA
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Udry GAO, Tiessler-Sala L, Pugliese E, Urvoas A, Halime Z, Maréchal JD, Mahy JP, Ricoux R. Photocatalytic Hydrogen Production and Carbon Dioxide Reduction Catalyzed by an Artificial Cobalt Hemoprotein. Int J Mol Sci 2022; 23:ijms232314640. [PMID: 36498969 PMCID: PMC9736947 DOI: 10.3390/ijms232314640] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2022] [Revised: 11/18/2022] [Accepted: 11/21/2022] [Indexed: 11/25/2022] Open
Abstract
The covalent insertion of a cobalt heme into the cavity of an artificial protein named alpha Rep (αRep) leads to an artificial cobalt hemoprotein that is active as a catalyst not only for the photo-induced production of H2, but also for the reduction of CO2 in a neutral aqueous solution. This new artificial metalloenzyme has been purified and characterized by Matrix Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry (MALDI-TOF MS), circular dichroism, and UltraViolet-Visible spectroscopy. Using theoretical experiments, the structure of this biohybrid and the positioning of the residues near the metal complex were examined, which made it possible to complete the coordination of the cobalt ion by an axial glutamine Gln283 ligand. While the Co(III)-porphyrin catalyst alone showed weak catalytic activity for both reactions, 10 times more H2 and four times more CO2 were produced when the Co(III)-porphyrin complex was buried in the hydrophobic cavity of the protein. This study thus provides a solid basis for further improvement of these biohybrids using well-designed modifications of the second and outer coordination sphere by site-directed mutagenesis of the host protein.
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Affiliation(s)
- Guillermo A. Oliveira Udry
- UMR 8182, CNRS, Institut de Chimie Moleculaire & des Matériaux d’Orsay, University Paris-Saclay, F-91405 Orsay, France
| | - Laura Tiessler-Sala
- Departament de Química, Universitat Autònoma de Barcelona, 08193 Bellaterra, Spain
| | - Eva Pugliese
- UMR 8182, CNRS, Institut de Chimie Moleculaire & des Matériaux d’Orsay, University Paris-Saclay, F-91405 Orsay, France
| | - Agathe Urvoas
- CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), University Paris-Saclay, F-91198 Gif-sur-Yvette, France
| | - Zakaria Halime
- UMR 8182, CNRS, Institut de Chimie Moleculaire & des Matériaux d’Orsay, University Paris-Saclay, F-91405 Orsay, France
| | - Jean-Didier Maréchal
- Departament de Química, Universitat Autònoma de Barcelona, 08193 Bellaterra, Spain
| | - Jean-Pierre Mahy
- UMR 8182, CNRS, Institut de Chimie Moleculaire & des Matériaux d’Orsay, University Paris-Saclay, F-91405 Orsay, France
- Correspondence:
| | - Rémy Ricoux
- UMR 8182, CNRS, Institut de Chimie Moleculaire & des Matériaux d’Orsay, University Paris-Saclay, F-91405 Orsay, France
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Meng X, Liu L, Chen X. Bacterial photosynthesis: state-of-the-art in light-driven carbon fixation in engineered bacteria. Curr Opin Microbiol 2022; 69:102174. [DOI: 10.1016/j.mib.2022.102174] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2022] [Revised: 05/24/2022] [Accepted: 05/30/2022] [Indexed: 11/03/2022]
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Ennist NM, Stayrook SE, Dutton PL, Moser CC. Rational design of photosynthetic reaction center protein maquettes. Front Mol Biosci 2022; 9:997295. [PMID: 36213121 PMCID: PMC9532970 DOI: 10.3389/fmolb.2022.997295] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2022] [Accepted: 08/18/2022] [Indexed: 11/20/2022] Open
Abstract
New technologies for efficient solar-to-fuel energy conversion will help facilitate a global shift from dependence on fossil fuels to renewable energy. Nature uses photosynthetic reaction centers to convert photon energy into a cascade of electron-transfer reactions that eventually produce chemical fuel. The design of new reaction centers de novo deepens our understanding of photosynthetic charge separation and may one day allow production of biofuels with higher thermodynamic efficiency than natural photosystems. Recently, we described the multi-step electron-transfer activity of a designed reaction center maquette protein (the RC maquette), which can assemble metal ions, tyrosine, a Zn tetrapyrrole, and heme into an electron-transport chain. Here, we detail our modular strategy for rational protein design and show that the intended RC maquette design agrees with crystal structures in various states of assembly. A flexible, dynamic apo-state collapses by design into a more ordered holo-state upon cofactor binding. Crystal structures illustrate the structural transitions upon binding of different cofactors. Spectroscopic assays demonstrate that the RC maquette binds various electron donors, pigments, and electron acceptors with high affinity. We close with a critique of the present RC maquette design and use electron-tunneling theory to envision a path toward a designed RC with a substantially higher thermodynamic efficiency than natural photosystems.
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Affiliation(s)
- Nathan M. Ennist
- Department of Biochemistry and Biophysics, University of Pennsylvania, Philadelphia, PA, United States
- Institute for Protein Design, University of Washington, Seattle, WA, United States
- Department of Biochemistry, University of Washington, Seattle, WA, United States
- *Correspondence: Nathan M. Ennist,
| | - Steven E. Stayrook
- Department of Biochemistry and Biophysics, University of Pennsylvania, Philadelphia, PA, United States
- Department of Pharmacology, Yale University School of Medicine, New Haven, CT, United States
- Yale Cancer Biology Institute, Yale University West Campus, West Haven, CT, United States
| | - P. Leslie Dutton
- Department of Biochemistry and Biophysics, University of Pennsylvania, Philadelphia, PA, United States
| | - Christopher C. Moser
- Department of Biochemistry and Biophysics, University of Pennsylvania, Philadelphia, PA, United States
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Edwards EH, Le JM, Salamatian AA, Peluso NL, Leone L, Lombardi A, Bren KL. A cobalt mimochrome for photochemical hydrogen evolution from neutral water. J Inorg Biochem 2022; 230:111753. [PMID: 35182844 PMCID: PMC9586700 DOI: 10.1016/j.jinorgbio.2022.111753] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2021] [Revised: 02/03/2022] [Accepted: 02/04/2022] [Indexed: 11/21/2022]
Abstract
A system for visible light-driven hydrogen production from water is reported. This system makes use of a synthetic mini-enzyme known as a mimochrome (CoMC6*a) consisting of a cobalt deuteroporphyrin and two attached peptides as a catalyst, [Ru(bpy)3]2+ (bpy = 2,2'-bipyridine) as a photosensitizer, and ascorbic acid as a sacrificial electron donor. The system achieves turnover numbers (TONs) up to 10,000 with respect to catalyst and optimal activity at pH 7. Comparison with related systems shows that CoMC6*a maintains the advantages of biomolecular catalysts, while exceeding other cobalt porphyrins in terms of total TON and longevity of catalysis. Herein, we lay groundwork for future study, where the synthetic nature of CoMC6*a will provide a unique opportunity to tailor proton reduction chemistry and expand to new reactivity.
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Affiliation(s)
- Emily H Edwards
- Department of Chemistry, University of Rochester, 120 Trustee Rd., Rochester, NY 14627-0216, USA.
| | - Jennifer M Le
- Department of Chemistry, University of Rochester, 120 Trustee Rd., Rochester, NY 14627-0216, USA.
| | - Alison A Salamatian
- Department of Chemistry, University of Rochester, 120 Trustee Rd., Rochester, NY 14627-0216, USA.
| | - Noelle L Peluso
- Department of Chemistry, University of Rochester, 120 Trustee Rd., Rochester, NY 14627-0216, USA.
| | - Linda Leone
- Department of Chemical Sciences, University of Naples Federico II, Complesso Universitario Monte S. Angelo, via Cintia 45, 80126 Naples, Italy.
| | - Angela Lombardi
- Department of Chemical Sciences, University of Naples Federico II, Complesso Universitario Monte S. Angelo, via Cintia 45, 80126 Naples, Italy.
| | - Kara L Bren
- Department of Chemistry, University of Rochester, 120 Trustee Rd., Rochester, NY 14627-0216, USA.
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