1
|
Zia-Ur-Rehman, Awang MK, Ali G, Faheem M. Deep learning techniques for Alzheimer's disease detection in 3D imaging: A systematic review. Health Sci Rep 2024; 7:e70025. [PMID: 39296636 PMCID: PMC11409051 DOI: 10.1002/hsr2.70025] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2024] [Revised: 07/08/2024] [Accepted: 08/13/2024] [Indexed: 09/21/2024] Open
Abstract
Background and Aims Alzheimer's disease (AD) is a degenerative neurological condition that worsens over time and leads to deterioration in cognitive abilities, reduced memory, and, eventually, a decrease in overall functioning. Timely and correct identification of Alzheimer's is essential for effective treatment. The systematic study specifically examines the application of deep learning (DL) algorithms in identifying AD using three-dimensional (3D) imaging methods. The main goal is to evaluate these methods' current state, efficiency, and potential enhancements, offering valuable insights into how DL could improve AD's rapid and precise diagnosis. Methods We searched different online repositories, such as IEEE Xplore, Elsevier, MDPI, PubMed Central, Science Direct, ACM, Springer, and others, to thoroughly summarize current research on DL methods to diagnose AD by analyzing 3D imaging data published between 2020 and 2024. We use PRISMA (Preferred Reporting Items for Systematic Reviews and Meta-Analyses) guidelines to ensure the organization and understandability of the information collection process. We thoroughly analyzed the literature to determine the primary techniques used in these investigations and their findings. Results and Conclusion The ability of convolutional neural networks (CNNs) and their variations, including 3D CNNs and recurrent neural networks, to detect both temporal and spatial characteristics in volumetric data has led to their widespread use. Methods such as transfer learning, combining multimodal data, and using attention procedures have improved models' precision and reliability. We selected 87 articles for evaluation. Out of these, 31 papers included various concepts, explanations, and elucidations of models and theories, while the other 56 papers primarily concentrated on issues related to practical implementation. This article introduces popular imaging types, 3D imaging for Alzheimer's detection, discusses the benefits and restrictions of the DL-based approach to AD assessment, and gives a view toward future developments resulting from critical evaluation.
Collapse
Affiliation(s)
- Zia-Ur-Rehman
- Faculty of Informatics and Computing Universiti Sultan Zainal Abidin (UniSZA) Terengganu Malaysia
| | - Mohd Khalid Awang
- Faculty of Informatics and Computing Universiti Sultan Zainal Abidin (UniSZA) Terengganu Malaysia
| | - Ghulam Ali
- Department of Computer Science University of Okara Okara Pakistan
| | - Muhammad Faheem
- School of Technology and Innovations University of Vaasa Vaasa Finland
| |
Collapse
|
2
|
Ul Rehman S, Tarek N, Magdy C, Kamel M, Abdelhalim M, Melek A, N. Mahmoud L, Sadek I. AI-based tool for early detection of Alzheimer's disease. Heliyon 2024; 10:e29375. [PMID: 38644855 PMCID: PMC11033128 DOI: 10.1016/j.heliyon.2024.e29375] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2023] [Revised: 04/07/2024] [Accepted: 04/07/2024] [Indexed: 04/23/2024] Open
Abstract
In the context of Alzheimer's disease (AD), timely identification is paramount for effective management, acknowledging its chronic and irreversible nature, where medications can only impede its progression. Our study introduces a holistic solution, leveraging the hippocampus and the VGG16 model with transfer learning for early AD detection. The hippocampus, a pivotal early affected region linked to memory, plays a central role in classifying patients into three categories: cognitively normal (CN), representing individuals without cognitive impairment; mild cognitive impairment (MCI), indicative of a subtle decline in cognitive abilities; and AD, denoting Alzheimer's disease. Employing the Alzheimer's Disease Neuroimaging Initiative (ADNI) dataset, our model undergoes training enriched by advanced image preprocessing techniques, achieving outstanding accuracy (testing 98.17 %, validation 97.52 %, training 99.62 %). The strategic use of transfer learning fortifies our competitive edge, incorporating the hippocampus approach and, notably, a progressive data augmentation technique. This innovative augmentation strategy gradually introduces augmentation factors during training, significantly elevating accuracy and enhancing the model's generalization ability. The study emphasizes practical application with a user-friendly website, empowering radiologists to predict class probabilities, track disease progression, and visualize patient images in both 2D and 3D formats, contributing significantly to the advancement of early AD detection.
Collapse
Affiliation(s)
| | - Noha Tarek
- Systems and Biomedical Engineering, Faculty of Engineering, Cairo University, Cairo, Egypt
| | - Caroline Magdy
- Systems and Biomedical Engineering, Faculty of Engineering, Cairo University, Cairo, Egypt
| | - Mohammed Kamel
- Systems and Biomedical Engineering, Faculty of Engineering, Cairo University, Cairo, Egypt
| | - Mohammed Abdelhalim
- Systems and Biomedical Engineering, Faculty of Engineering, Cairo University, Cairo, Egypt
| | - Alaa Melek
- Systems and Biomedical Engineering, Faculty of Engineering, Cairo University, Cairo, Egypt
| | - Lamees N. Mahmoud
- Biomedical Engineering Dept, Faculty of Engineering, Helwan University, Helwan, Cairo, Egypt
| | - Ibrahim Sadek
- Biomedical Engineering Dept, Faculty of Engineering, Helwan University, Helwan, Cairo, Egypt
| |
Collapse
|
3
|
Wang SH, Satapathy SC, Xie MX, Zhang YD. ELUCNN for explainable COVID-19 diagnosis. Soft comput 2023:1-17. [PMID: 36686545 PMCID: PMC9839226 DOI: 10.1007/s00500-023-07813-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 01/02/2023] [Indexed: 01/15/2023]
Abstract
COVID-19 is a positive-sense single-stranded RNA virus caused by a strain of coronavirus, severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). Several noteworthy variants of SARS-CoV-2 were declared by WHO as Alpha, Beta, Gamma, Delta, and Omicron. Till 13/Dec/2022, it has caused 6.65 million death tolls, and over 649 million confirmed positive cases. Based on the convolutional neural network (CNN), this study first proposes a ten-layer CNN as the backbone model. Then, the exponential linear unit (ELU) is introduced to replace ReLU, and the traditional convolutional block is now transformed into conv-ELU. Finally, an ELU-based CNN (ELUCNN) model is proposed for COVID-19 diagnosis. Besides, the MDA strategy is used to enhance the size of the training set. We develop a mobile app integrating ELUCNN, and this web app is run on a client-server modeled structure. Ten runs of the tenfold cross-validation experiment show our model yields a sensitivity of 94.41 ± 0.98 , a specificity of 94.84 ± 1.21 , an accuracy of 94.62 ± 0.96 , and an F1 score of 94.61 ± 0.95 . The ELUCNN model and mobile app are effective in COVID-19 diagnosis and give better results than 14 state-of-the-art COVID-19 diagnosis models concerning accuracy.
Collapse
Affiliation(s)
- Shui-Hua Wang
- School of Computer Science and Technology, Henan Polytechnic University, Jiaozuo, 454000 Henan People’s Republic of China
- School of Computing and Mathematical Sciences, University of Leicester, Leicester, LE1 7RH UK
- Department of Information Systems, Faculty of Computing and Information Technology, King Abdulaziz University, Jeddah, 21589 Saudi Arabia
| | | | - Man-Xia Xie
- Department of Infection Diseases, The Fourth People’s Hospital of Huai’an, Huai’an, 223002 Jiangsu China
| | - Yu-Dong Zhang
- School of Computer Science and Technology, Henan Polytechnic University, Jiaozuo, 454000 Henan People’s Republic of China
- School of Computing and Mathematical Sciences, University of Leicester, Leicester, LE1 7RH UK
- Department of Information Systems, Faculty of Computing and Information Technology, King Abdulaziz University, Jeddah, 21589 Saudi Arabia
| |
Collapse
|
4
|
Lan Y, Guo Y, Chen Q, Lin S, Chen Y, Deng X. Visual question answering model for fruit tree disease decision-making based on multimodal deep learning. FRONTIERS IN PLANT SCIENCE 2023; 13:1064399. [PMID: 36684756 PMCID: PMC9849817 DOI: 10.3389/fpls.2022.1064399] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/08/2022] [Accepted: 12/02/2022] [Indexed: 06/17/2023]
Abstract
Visual Question Answering (VQA) about diseases is an essential feature of intelligent management in smart agriculture. Currently, research on fruit tree diseases using deep learning mainly uses single-source data information, such as visible images or spectral data, yielding classification and identification results that cannot be directly used in practical agricultural decision-making. In this study, a VQA model for fruit tree diseases based on multimodal feature fusion was designed. Fusing images and Q&A knowledge of disease management, the model obtains the decision-making answer by querying questions about fruit tree disease images to find relevant disease image regions. The main contributions of this study were as follows: (1) a multimodal bilinear factorized pooling model using Tucker decomposition was proposed to fuse the image features with question features: (2) a deep modular co-attention architecture was explored to simultaneously learn the image and question attention to obtain richer graphical features and interactivity. The experiments showed that the proposed unified model combining the bilinear model and co-attentive learning in a new network architecture obtained 86.36% accuracy in decision-making under the condition of limited data (8,450 images and 4,560k Q&A pairs of data), outperforming existing multimodal methods. The data augmentation is adopted on the training set to avoid overfitting. Ten runs of 10-fold cross-validation are used to report the unbiased performance. The proposed multimodal fusion model achieved friendly interaction and fine-grained identification and decision-making performance. Thus, the model can be widely deployed in intelligent agriculture.
Collapse
Affiliation(s)
- Yubin Lan
- College of Electronic Engineering, College of Artificial Intelligence, South China Agricultural University, Guangzhou, China
- Guangdong Laboratory for Lingnan Modern Agriculture, Guangzhou, China
- National Center for International Collaboration Research on Precision Agricultural Aviation Pesticide Spraying Technology, Guangzhou, China
- Guangdong Engineering Technology Research Center of Smart Agriculture, Guangzhou, China
| | - Yaqi Guo
- College of Electronic Engineering, College of Artificial Intelligence, South China Agricultural University, Guangzhou, China
- Guangdong Laboratory for Lingnan Modern Agriculture, Guangzhou, China
| | - Qizhen Chen
- College of Electronic Engineering, College of Artificial Intelligence, South China Agricultural University, Guangzhou, China
- Guangdong Laboratory for Lingnan Modern Agriculture, Guangzhou, China
| | - Shaoming Lin
- College of Electronic Engineering, College of Artificial Intelligence, South China Agricultural University, Guangzhou, China
- Guangdong Laboratory for Lingnan Modern Agriculture, Guangzhou, China
| | - Yuntong Chen
- College of Electronic Engineering, College of Artificial Intelligence, South China Agricultural University, Guangzhou, China
- Guangdong Laboratory for Lingnan Modern Agriculture, Guangzhou, China
| | - Xiaoling Deng
- College of Electronic Engineering, College of Artificial Intelligence, South China Agricultural University, Guangzhou, China
- Guangdong Laboratory for Lingnan Modern Agriculture, Guangzhou, China
- National Center for International Collaboration Research on Precision Agricultural Aviation Pesticide Spraying Technology, Guangzhou, China
- Guangdong Engineering Technology Research Center of Smart Agriculture, Guangzhou, China
| |
Collapse
|
5
|
Research on lung nodule recognition algorithm based on deep feature fusion and MKL-SVM-IPSO. Sci Rep 2022; 12:17403. [PMID: 36257988 PMCID: PMC9579155 DOI: 10.1038/s41598-022-22442-3] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2022] [Accepted: 10/14/2022] [Indexed: 01/10/2023] Open
Abstract
Lung CAD system can provide auxiliary third-party opinions for doctors, improve the accuracy of lung nodule recognition. The selection and fusion of nodule features and the advancement of recognition algorithms are crucial improving lung CAD systems. Based on the HDL model, this paper mainly focuses on the three key algorithms of feature extraction, feature fusion and nodule recognition of lung CAD system. First, CBAM is embedded into VGG16 and VGG19, and feature extraction models AE-VGG16 and AE-VGG19 are constructed, so that the network can pay more attention to the key feature information in nodule description. Then, feature dimensionality reduction based on PCA and feature fusion based on CCA are sequentially performed on the extracted depth features to obtain low-dimensional fusion features. Finally, the fusion features are input into the proposed MKL-SVM-IPSO model based on the improved Particle Swarm Optimization algorithm to speed up the training speed, get the global optimal parameter group. The public dataset LUNA16 was selected for the experiment. The results show that the accuracy of lung nodule recognition of the proposed lung CAD system can reach 99.56%, and the sensitivity and F1-score can reach 99.3% and 0.9965, respectively, which can reduce the possibility of false detection and missed detection of nodules.
Collapse
|
6
|
Huang C, Wang J, Wang SH, Zhang YD. Applicable artificial intelligence for brain disease: A survey. Neurocomputing 2022. [DOI: 10.1016/j.neucom.2022.07.005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
|
7
|
Khojaste-Sarakhsi M, Haghighi SS, Ghomi SF, Marchiori E. Deep learning for Alzheimer's disease diagnosis: A survey. Artif Intell Med 2022; 130:102332. [DOI: 10.1016/j.artmed.2022.102332] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2020] [Revised: 04/29/2022] [Accepted: 05/30/2022] [Indexed: 11/28/2022]
|
8
|
Diagnosing gastrointestinal diseases from endoscopy images through a multi-fused CNN with auxiliary layers, alpha dropouts, and a fusion residual block. Biomed Signal Process Control 2022. [DOI: 10.1016/j.bspc.2022.103683] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
|
9
|
Lei J, Huang X, Huang H, Chu H, Wang J, Jiang X. The Internet of things technology in the rehabilitation for the disabled in China: A survey. EAI ENDORSED TRANSACTIONS ON INTERNET OF THINGS 2022. [DOI: 10.4108/eetiot.v8i29.988] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
According to the WORLD Disabled Persons federation (WPF), there are a large number of disabled people in the world, accounting for over 400 million in the Asia-Pacific region alone. This paper discusses the application of the Internet of Things technology in the rehabilitation of special populations, aiming at achieving high allocation of resources without changing personnel allocation, realizing innovation to improve economic benefits without changing personnel allocation, and rationally optimizing resource allocation to achieve maximum. Firstly, we give an overview of the Internet of Things technology and its application, and introduce the sensor, RFID, embedded system and other technologies. Then, we discuss the application of Internet of Things technology in the rehabilitation of disabled people, from the rehabilitation needs of disabled people and the application of Internet of Things technology in the field of rehabilitation. Then, from the statistical analysis of the application of Internet of Things technology in the rehabilitation field in the past 10 years, we obtained the shortcomings of the application of Internet of Things technology in the rehabilitation field and some space for further exploration. Finally, we believe that the application of Internet of Things technology to the rehabilitation management of persons with disabilities will be a breakthrough in the rehabilitation management of persons with disabilities, and have important reference value for the rehabilitation management of persons with disabilities worldwide. We also hope that understanding, respecting, caring and helping people with disabilities will increasingly become a global consensus and action.
Collapse
|
10
|
Meng X, Liu J, Fan X, Bian C, Wei Q, Wang Z, Liu W, Jiao Z. Multi-Modal Neuroimaging Neural Network-Based Feature Detection for Diagnosis of Alzheimer’s Disease. Front Aging Neurosci 2022; 14:911220. [PMID: 35651528 PMCID: PMC9149574 DOI: 10.3389/fnagi.2022.911220] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2022] [Accepted: 04/19/2022] [Indexed: 11/29/2022] Open
Abstract
Alzheimer’s disease (AD) is a neurodegenerative brain disease, and it is challenging to mine features that distinguish AD and healthy control (HC) from multiple datasets. Brain network modeling technology in AD using single-modal images often lacks supplementary information regarding multi-source resolution and has poor spatiotemporal sensitivity. In this study, we proposed a novel multi-modal LassoNet framework with a neural network for AD-related feature detection and classification. Specifically, data including two modalities of resting-state functional magnetic resonance imaging (rs-fMRI) and diffusion tensor imaging (DTI) were adopted for predicting pathological brain areas related to AD. The results of 10 repeated experiments and validation experiments in three groups prove that our proposed framework outperforms well in classification performance, generalization, and reproducibility. Also, we found discriminative brain regions, such as Hippocampus, Frontal_Inf_Orb_L, Parietal_Sup_L, Putamen_L, Fusiform_R, etc. These discoveries provide a novel method for AD research, and the experimental study demonstrates that the framework will further improve our understanding of the mechanisms underlying the development of AD.
Collapse
Affiliation(s)
- Xianglian Meng
- School of Computer Information and Engineering, Changzhou Institute of Technology, Changzhou, China
| | - Junlong Liu
- School of Computer Information and Engineering, Changzhou Institute of Technology, Changzhou, China
| | - Xiang Fan
- School of Computer Information and Engineering, Changzhou Institute of Technology, Changzhou, China
| | - Chenyuan Bian
- Shandong Provincial Key Laboratory of Digital Medicine and Computer-Assisted Surgery, Affiliated Hospital of Qingdao University, Qingdao, China
| | - Qingpeng Wei
- School of Computer Information and Engineering, Changzhou Institute of Technology, Changzhou, China
| | - Ziwei Wang
- School of Computer Information and Engineering, Changzhou Institute of Technology, Changzhou, China
| | - Wenjie Liu
- School of Computer Information and Engineering, Changzhou Institute of Technology, Changzhou, China
- *Correspondence: Wenjie Liu,
| | - Zhuqing Jiao
- School of Computer Science and Artificial Intelligence, Changzhou University, Changzhou, China
- Zhuqing Jiao,
| |
Collapse
|
11
|
Zheng X, Cloutier RS. A Review of Image Classification Algorithms in IoT. EAI ENDORSED TRANSACTIONS ON INTERNET OF THINGS 2022. [DOI: 10.4108/eetiot.v7i28.562] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
With the advent of big data era and the enhancement of computing power, Deep Learning has swept the world. Based on Convolutional Neural Network (CNN) image classification technique broke the restriction of classical image classification methods, becoming the dominant algorithm of image classification. How to use CNN for image classification has turned into a hot spot. After systematically studying convolutional neural network and in-depth research of the application of CNN in computer vision, this research briefly introduces the mainstream structural models, strengths and shortcomings, time/space complexity, challenges that may be suffered during model training and associated solutions for image classification. This research also compares and analyzes the differences between different methods and their performance on commonly used data sets. Finally, the shortcomings of Deep Learning methods in image classification and possible future research directions are discussed.
Collapse
|
12
|
Zhang H. A Review of Convolutional Neural Network Development in Computer Vision. EAI ENDORSED TRANSACTIONS ON INTERNET OF THINGS 2022. [DOI: 10.4108/eetiot.v7i28.445] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
Convolutional neural networks have made admirable progress in computer vision. As a fast-growing computer field, CNNs are one of the classical and widely used network structures. The Internet of Things (IoT) has gotten a lot of attention in recent years. This has directly led to the vigorous development of AI technology, such as the intelligent luggage security inspection system developed by the IoT, intelligent fire alarm system, driverless car, drone technology, and other cutting-edge directions. This paper first outlines the structure of CNNs, including the convolutional layer, the downsampling layer, and the fully connected layer, all of which play an important role. Then some different modules of classical networks are described, and these modules are rapidly driving the development of CNNs. And then the current state of CNNs research in image classification, object segmentation, and object detection is discussed.
Collapse
|
13
|
Mittal P, Sharma A, Singh R, Sangaiah AK. On the performance evaluation of object classification models in low altitude aerial data. THE JOURNAL OF SUPERCOMPUTING 2022; 78:14548-14570. [PMID: 35399758 PMCID: PMC8982665 DOI: 10.1007/s11227-022-04469-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Accepted: 03/17/2022] [Indexed: 06/14/2023]
Abstract
This paper compares the classification performance of machine learning classifiers vs. deep learning-based handcrafted models and various pretrained deep networks. The proposed study performs a comprehensive analysis of object classification techniques implemented on low-altitude UAV datasets using various machine and deep learning models. Multiple UAV object classification is performed through widely deployed machine learning-based classifiers such as K nearest neighbor, decision trees, naïve Bayes, random forest, a deep handcrafted model based on convolutional layers, and pretrained deep models. The best result obtained using random forest classifiers on the UAV dataset is 90%. The handcrafted deep model's accuracy score suggests the efficacy of deep models over machine learning-based classifiers in low-altitude aerial images. This model attains 92.48% accuracy, which is a significant improvement over machine learning-based classifiers. Thereafter, we analyze several pretrained deep learning models, such as VGG-D, InceptionV3, DenseNet, Inception-ResNetV4, and Xception. The experimental assessment demonstrates nearly 100% accuracy values using pretrained VGG16- and VGG19-based deep networks. This paper provides a compilation of machine learning-based classifiers and pretrained deep learning models and a comprehensive classification report for the respective performance measures.
Collapse
Affiliation(s)
| | | | - Raman Singh
- Thapar Institute of Engineering and Technology, Patiala, India
| | - Arun Kumar Sangaiah
- School of Computer Science and Engineering, Vellore Institute of Technology, Vellore, India
- Department of Industrial Engineering and Management, National Yunlin University of Science and Technology, Douliu, Taiwan
| |
Collapse
|
14
|
Meng X, Wu Y, Liu W, Wang Y, Xu Z, Jiao Z. Research on Voxel-Based Features Detection and Analysis of Alzheimer’s Disease Using Random Survey Support Vector Machine. Front Neuroinform 2022; 16:856295. [PMID: 35418845 PMCID: PMC8995748 DOI: 10.3389/fninf.2022.856295] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2022] [Accepted: 02/08/2022] [Indexed: 11/13/2022] Open
Abstract
Alzheimer’s disease (AD) is a degenerative disease of the central nervous system characterized by memory and cognitive dysfunction, as well as abnormal changes in behavior and personality. The research focused on how machine learning classified AD became a recent hotspot. In this study, we proposed a novel voxel-based feature detection framework for AD. Specifically, using 649 voxel-based morphometry (VBM) methods obtained from MRI in Alzheimer’s Disease Neuroimaging Initiative (ADNI), we proposed a feature detection method according to the Random Survey Support Vector Machines (RS-SVM) and combined the research process based on image-, gene-, and pathway-level analysis for AD prediction. Particularly, we constructed 136, 141, and 113 novel voxel-based features for EMCI (early mild cognitive impairment)-HC (healthy control), LMCI (late mild cognitive impairment)-HC, and AD-HC groups, respectively. We applied linear regression model, least absolute shrinkage and selection operator (Lasso), partial least squares (PLS), SVM, and RS-SVM five methods to test and compare the accuracy of these features in these three groups. The prediction accuracy of the AD-HC group using the RS-SVM method was higher than 90%. In addition, we performed functional analysis of the features to explain the biological significance. The experimental results using five machine learning indicate that the identified features are effective for AD and HC classification, the RS-SVM framework has the best classification accuracy, and our strategy can identify important brain regions for AD.
Collapse
Affiliation(s)
- Xianglian Meng
- School of Computer Information and Engineering, Changzhou Institute of Technology, Changzhou, China
| | - Yue Wu
- School of Computer Information and Engineering, Changzhou Institute of Technology, Changzhou, China
| | - Wenjie Liu
- School of Computer Information and Engineering, Changzhou Institute of Technology, Changzhou, China
| | - Ying Wang
- School of Computer Science and Engineering, Changshu Institute of Technology, Changshu, China
| | - Zhe Xu
- School of Computer Information and Engineering, Changzhou Institute of Technology, Changzhou, China
| | - Zhuqing Jiao
- School of Computer Science and Artificial Intelligence, Changzhou University, Changzhou, China
- *Correspondence: Zhuqing Jiao,
| |
Collapse
|
15
|
Jain S, Indora S, Atal DK. Rider Manta Ray Foraging Optimization-based Generative Adversarial Network and CNN feature for detecting glaucoma. Biomed Signal Process Control 2022. [DOI: 10.1016/j.bspc.2021.103425] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
|
16
|
Zhang Y, Xi Z, Zheng J, Shi H, Jiao Z. GWLS: A Novel Model for Predicting Cognitive Function Scores in Patients With End-Stage Renal Disease. Front Aging Neurosci 2022; 14:834331. [PMID: 35185530 PMCID: PMC8850953 DOI: 10.3389/fnagi.2022.834331] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2021] [Accepted: 01/05/2022] [Indexed: 01/03/2023] Open
Abstract
The scores of the cognitive function of patients with end-stage renal disease (ESRD) are highly subjective, which tend to affect the results of clinical diagnosis. To overcome this issue, we proposed a novel model to explore the relationship between functional magnetic resonance imaging (fMRI) data and clinical scores, thereby predicting cognitive function scores of patients with ESRD. The model incorporated three parts, namely, graph theoretic algorithm (GTA), whale optimization algorithm (WOA), and least squares support vector regression machine (LSSVRM). It was called GTA-WOA-LSSVRM or GWLS for short. GTA was adopted to calculate the area under the curve (AUC) of topological parameters, which were extracted as the features from the functional networks of the brain. Then, the statistical method and Pearson correlation analysis were used to select the features. Finally, the LSSVRM was built according to the selected features to predict the cognitive function scores of patients with ESRD. Besides, WOA was introduced to optimize the parameters in the LSSVRM kernel function to improve the prediction accuracy. The results validated that the prediction accuracy obtained by GTA-WOA-LSSVRM was higher than several comparable models, such as GTA-SVRM, GTA-LSSVRM, and GTA-WOA-SVRM. In particular, the root mean square error (RMSE), mean absolute error (MAE), and mean absolute percentage error (MAPE) between the predicted scores and the actual scores of patients with ESRD were 0.92, 0.88, and 4.14%, respectively. The proposed method can more accurately predict the cognitive function scores of ESRD patients and thus helps to understand the pathophysiological mechanism of cognitive dysfunction associated with ESRD.
Collapse
Affiliation(s)
- Yutao Zhang
- School of Microelectronics and Control Engineering, Changzhou University, Changzhou, China
| | - Zhengtao Xi
- School of Microelectronics and Control Engineering, Changzhou University, Changzhou, China
| | - Jiahui Zheng
- Department of Radiology, Changzhou Second People’s Hospital Affiliated to Nanjing Medical University, Changzhou, China
| | - Haifeng Shi
- Department of Radiology, Changzhou Second People’s Hospital Affiliated to Nanjing Medical University, Changzhou, China
- *Correspondence: Haifeng Shi,
| | - Zhuqing Jiao
- School of Microelectronics and Control Engineering, Changzhou University, Changzhou, China
- School of Computer Science and Artificial Intelligence, Changzhou University, Changzhou, China
- Zhuqing Jiao,
| |
Collapse
|
17
|
Jiao Z, Chen S, Shi H, Xu J. Multi-Modal Feature Selection with Feature Correlation and Feature Structure Fusion for MCI and AD Classification. Brain Sci 2022; 12:80. [PMID: 35053823 PMCID: PMC8773824 DOI: 10.3390/brainsci12010080] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2021] [Revised: 12/24/2021] [Accepted: 12/29/2021] [Indexed: 11/16/2022] Open
Abstract
Feature selection for multiple types of data has been widely applied in mild cognitive impairment (MCI) and Alzheimer's disease (AD) classification research. Combining multi-modal data for classification can better realize the complementarity of valuable information. In order to improve the classification performance of feature selection on multi-modal data, we propose a multi-modal feature selection algorithm using feature correlation and feature structure fusion (FC2FS). First, we construct feature correlation regularization by fusing a similarity matrix between multi-modal feature nodes. Then, based on manifold learning, we employ feature matrix fusion to construct feature structure regularization, and learn the local geometric structure of the feature nodes. Finally, the two regularizations are embedded in a multi-task learning model that introduces low-rank constraint, the multi-modal features are selected, and the final features are linearly fused and input into a support vector machine (SVM) for classification. Different controlled experiments were set to verify the validity of the proposed method, which was applied to MCI and AD classification. The accuracy of normal controls versus Alzheimer's disease, normal controls versus late mild cognitive impairment, normal controls versus early mild cognitive impairment, and early mild cognitive impairment versus late mild cognitive impairment achieve 91.85 ± 1.42%, 85.33 ± 2.22%, 78.29 ± 2.20%, and 77.67 ± 1.65%, respectively. This method makes up for the shortcomings of the traditional multi-modal feature selection based on subjects and fully considers the relationship between feature nodes and the local geometric structure of feature space. Our study not only enhances the interpretation of feature selection but also improves the classification performance, which has certain reference values for the identification of MCI and AD.
Collapse
Affiliation(s)
- Zhuqing Jiao
- School of Computer Science and Artificial Intelligence, Changzhou University, Changzhou 213164, China; (Z.J.); (S.C.)
| | - Siwei Chen
- School of Computer Science and Artificial Intelligence, Changzhou University, Changzhou 213164, China; (Z.J.); (S.C.)
| | - Haifeng Shi
- Department of Radiology, Changzhou Second People’s Hospital, Nanjing Medical University, Changzhou 213003, China
- School of Microelectronics and Control Engineering, Changzhou University, Changzhou 213164, China
| | - Jia Xu
- School of Medicine, Ningbo University, Ningbo 315211, China
| |
Collapse
|
18
|
Koklu M, Cinar I, Taspinar YS. CNN-based bi-directional and directional long-short term memory network for determination of face mask. Biomed Signal Process Control 2021; 71:103216. [PMID: 34697552 PMCID: PMC8527867 DOI: 10.1016/j.bspc.2021.103216] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2021] [Revised: 08/30/2021] [Accepted: 09/30/2021] [Indexed: 01/10/2023]
Abstract
Context The COVID-19 virus, exactly like in
numerous other diseases, can be contaminated from person to person by
inhalation. In order to prevent the spread of this virus, which led to a
pandemic around the world, a series of rules have been set by governments
that people must follow. The obligation to use face masks, especially in
public spaces, is one of these rules. Objective The aim of this study is to determine
whether people are wearing the face mask correctly by using deep learning
methods. Methods A dataset consisting of 2000 images
was created. In the dataset, images of a person from three different
angles were collected in four classes, which are “masked”, “non-masked”,
“masked but nose open”, and “masked but under the chin”. Using this data,
new models are proposed by transferring the learning through AlexNet and
VGG16, which are the Convolutional Neural network architectures.
Classification layers of these models were removed and, Long-Short Term
Memory and Bi-directional Long-Short Term Memory architectures were added
instead. Result and conclusions Although there are four different
classes to determine whether the face masks are used correctly, in the
six models proposed, high success rates have been achieved. Among all
models, the TrVGG16 + BiLSTM model has achieved the highest
classification accuracy with 95.67%. Significance The study has proven that it can take
advantage of the proposed models in conjunction with transfer learning to
ensure the proper and effective use of the face mask, considering the
benefit of society.
Collapse
Affiliation(s)
- Murat Koklu
- Department of Computer Engineering, Selcuk University, Konya, Turkey
| | - Ilkay Cinar
- Department of Computer Engineering, Selcuk University, Konya, Turkey
| | | |
Collapse
|
19
|
Wang SH, Jiang X, Zhang YD. Multiple Sclerosis Recognition by Biorthogonal Wavelet Features and Fitness-Scaled Adaptive Genetic Algorithm. Front Neurosci 2021; 15:737785. [PMID: 34588953 PMCID: PMC8473924 DOI: 10.3389/fnins.2021.737785] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2021] [Accepted: 08/05/2021] [Indexed: 11/13/2022] Open
Abstract
Aim: Multiple sclerosis (MS) is a disease, which can affect the brain and/or spinal cord, leading to a wide range of potential symptoms. This method aims to propose a novel MS recognition method. Methods: First, the bior4.4 wavelet is used to extract multiscale coefficients. Second, three types of biorthogonal wavelet features are proposed and calculated. Third, fitness-scaled adaptive genetic algorithm (FAGA)-a combination of standard genetic algorithm, adaptive mechanism, and power-rank fitness scaling-is harnessed as the optimization algorithm. Fourth, multiple-way data augmentation is utilized on the training set under the setting of 10 runs of 10-fold cross-validation. Our method is abbreviated as BWF-FAGA. Results: Our method achieves a sensitivity of 98.00 ± 0.95%, a specificity of 97.78 ± 0.95%, and an accuracy of 97.89 ± 0.94%. The area under the curve of our method is 0.9876. Conclusion: The results show that the proposed BWF-FAGA method is better than 10 state-of-the-art MS recognition methods, including eight artificial intelligence-based methods, and two deep learning-based methods.
Collapse
Affiliation(s)
- Shui-Hua Wang
- School of Mathematics and Actuarial Science, University of Leicester, Leicester, United Kingdom
| | - Xianwei Jiang
- Nanjing Normal University of Special Education, Nanjing, China
| | - Yu-Dong Zhang
- School of Informatics, University of Leicester, Leicester, United Kingdom
| |
Collapse
|
20
|
Xia Z, Zhou T, Mamoon S, Lu J. Recognition of Dementia Biomarkers With Deep Finer-DBN. IEEE Trans Neural Syst Rehabil Eng 2021; 29:1926-1935. [PMID: 34506288 DOI: 10.1109/tnsre.2021.3111989] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
The treatment of neurodegenerative diseases is expensive, and long-term treatment makes families bear a heavy burden. Accumulating evidence suggests that the high conversion rate can possibly be reduced if clinical interventions are applied at the early stage of brain diseases. Thus, a variety of deep learning methods are utilized to recognize the early stages of neurodegenerative diseases for clinical intervention and treatment. However, most existing methods have ignored the issue of sample imbalance, which often makes it difficult to train an effective model due to lack of a large number of negative samples. To address this problem, we propose a two-stage method, which is used to learn the compression and recover rules of normal subjects so that potential negative samples can be detected. The experimental results show that the proposed method can not only obtain a superb recognition result, but also give an explanation that conforms to the physiological mechanism. Most importantly, the deep learning model does not need to be retrained for each type of disease, which can be widely applied to the diagnosis of various brain diseases. Furthermore, this research could have great potential in understanding regional dysfunction of various brain diseases.
Collapse
|