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Palabas T, Longtin A, Ghosh D, Uzuntarla M. Controlling the spontaneous firing behavior of a neuron with astrocyte. CHAOS (WOODBURY, N.Y.) 2022; 32:051101. [PMID: 35649970 DOI: 10.1063/5.0093234] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/27/2022] [Accepted: 04/18/2022] [Indexed: 06/15/2023]
Abstract
Mounting evidence in recent years suggests that astrocytes, a sub-type of glial cells, not only serve metabolic and structural support for neurons and synapses but also play critical roles in the regulation of proper functioning of the nervous system. In this work, we investigate the effect of astrocytes on the spontaneous firing activity of a neuron through a combined model that includes a neuron-astrocyte pair. First, we show that an astrocyte may provide a kind of multistability in neuron dynamics by inducing different firing modes such as random and bursty spiking. Then, we identify the underlying mechanism of this behavior and search for the astrocytic factors that may have regulatory roles in different firing regimes. More specifically, we explore how an astrocyte can participate in the occurrence and control of spontaneous irregular spiking activity of a neuron in random spiking mode. Additionally, we systematically investigate the bursty firing regime dynamics of the neuron under the variation of biophysical facts related to the intracellular environment of the astrocyte. It is found that an astrocyte coupled to a neuron can provide a control mechanism for both spontaneous firing irregularity and burst firing statistics, i.e., burst regularity and size.
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Affiliation(s)
- Tugba Palabas
- Department of Biomedical Engineering, Zonguldak Bulent Ecevit University, 67100 Zonguldak, Turkey
| | - Andre Longtin
- Department of Physics, University of Ottawa, Ottawa, Ontario K1N 6N5, Canada
| | - Dibakar Ghosh
- Physics and Applied Mathematics Unit, Indian Statistical Institute, Kolkata 700108, India
| | - Muhammet Uzuntarla
- Department of Bioengineering, Gebze Technical University, 41400 Kocaeli, Turkey
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2
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Wang T, Sun J, Yang F, Li J, Wang W, Liu F. Background synaptic input modulates the visuospatial working memory. Phys Rev E 2021; 104:024416. [PMID: 34525588 DOI: 10.1103/physreve.104.024416] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2021] [Accepted: 08/06/2021] [Indexed: 11/07/2022]
Abstract
It is generally thought that persistent firing of neurons in the prefrontal cortex underlies working memory. Previous studies have focused on the influence of recurrent synaptic connectivity in local circuits on memory storage. Given neurons in the neocortex are extensively connected, individual neural circuits should receive synaptic inputs from other areas. Here we explore how background synaptic inputs (BSIs) modulate the visuospatial working memory in an oculomotor delayed response task. In a local recurrent network composed of pyramidal cells and interneurons, a bump attractor persists across the delay period, encoding the cue location. Under independent BSIs, the spontaneous network state before the cue presentation can be classified as inactive, active, or overactive, occurring successively with increasing the BSI strength, and the active state facilitates the memory storage. Under spatially correlated BSIs, optimal scenarios, in terms of accuracy of representation and resistance to distraction, involve the BSIs with intermediate strength and low correlation or high strength and moderate correlation. Our results demonstrate how the memory storage is regulated via tuning the balance between local excitation and global inhibition in the network. The current work reveals the functional importance of background input and suggests that robust memory storage could be accomplished over a variety of network states.
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Affiliation(s)
- Tao Wang
- National Laboratory of Solid State Microstructures, Department of Physics, Collaborative Innovation Center of Advanced Microstructures, and Institute for Brain Sciences, Nanjing University, Nanjing 210093, People's Republic of China
| | - Jun Sun
- National Laboratory of Solid State Microstructures, Department of Physics, Collaborative Innovation Center of Advanced Microstructures, and Institute for Brain Sciences, Nanjing University, Nanjing 210093, People's Republic of China
| | - Fan Yang
- National Laboratory of Solid State Microstructures, Department of Physics, Collaborative Innovation Center of Advanced Microstructures, and Institute for Brain Sciences, Nanjing University, Nanjing 210093, People's Republic of China
| | - Jie Li
- School of Life Sciences, Nanjing University, Nanjing 210093, People's Republic of China
| | - Wei Wang
- National Laboratory of Solid State Microstructures, Department of Physics, Collaborative Innovation Center of Advanced Microstructures, and Institute for Brain Sciences, Nanjing University, Nanjing 210093, People's Republic of China
| | - Feng Liu
- National Laboratory of Solid State Microstructures, Department of Physics, Collaborative Innovation Center of Advanced Microstructures, and Institute for Brain Sciences, Nanjing University, Nanjing 210093, People's Republic of China
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3
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Byrne Á, Ross J, Nicks R, Coombes S. Mean-Field Models for EEG/MEG: From Oscillations to Waves. Brain Topogr 2021; 35:36-53. [PMID: 33993357 PMCID: PMC8813727 DOI: 10.1007/s10548-021-00842-4] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2020] [Accepted: 04/21/2021] [Indexed: 11/24/2022]
Abstract
Neural mass models have been used since the 1970s to model the coarse-grained activity of large populations of neurons. They have proven especially fruitful for understanding brain rhythms. However, although motivated by neurobiological considerations they are phenomenological in nature, and cannot hope to recreate some of the rich repertoire of responses seen in real neuronal tissue. Here we consider a simple spiking neuron network model that has recently been shown to admit an exact mean-field description for both synaptic and gap-junction interactions. The mean-field model takes a similar form to a standard neural mass model, with an additional dynamical equation to describe the evolution of within-population synchrony. As well as reviewing the origins of this next generation mass model we discuss its extension to describe an idealised spatially extended planar cortex. To emphasise the usefulness of this model for EEG/MEG modelling we show how it can be used to uncover the role of local gap-junction coupling in shaping large scale synaptic waves.
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Affiliation(s)
- Áine Byrne
- School of Mathematics and Statistics, Science Centre, University College Dublin, South Belfield, Dublin 4, Ireland.
| | - James Ross
- School of Mathematical Sciences, Centre for Mathematical Medicine and Biology, University of Nottingham, Nottingham, NG7 2RD, UK
| | - Rachel Nicks
- School of Mathematical Sciences, Centre for Mathematical Medicine and Biology, University of Nottingham, Nottingham, NG7 2RD, UK
| | - Stephen Coombes
- School of Mathematical Sciences, Centre for Mathematical Medicine and Biology, University of Nottingham, Nottingham, NG7 2RD, UK
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Bernardi D, Doron G, Brecht M, Lindner B. A network model of the barrel cortex combined with a differentiator detector reproduces features of the behavioral response to single-neuron stimulation. PLoS Comput Biol 2021; 17:e1007831. [PMID: 33556070 PMCID: PMC7895413 DOI: 10.1371/journal.pcbi.1007831] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2020] [Revised: 02/19/2021] [Accepted: 01/17/2021] [Indexed: 11/23/2022] Open
Abstract
The stimulation of a single neuron in the rat somatosensory cortex can elicit a behavioral response. The probability of a behavioral response does not depend appreciably on the duration or intensity of a constant stimulation, whereas the response probability increases significantly upon injection of an irregular current. Biological mechanisms that can potentially suppress a constant input signal are present in the dynamics of both neurons and synapses and seem ideal candidates to explain these experimental findings. Here, we study a large network of integrate-and-fire neurons with several salient features of neuronal populations in the rat barrel cortex. The model includes cellular spike-frequency adaptation, experimentally constrained numbers and types of chemical synapses endowed with short-term plasticity, and gap junctions. Numerical simulations of this model indicate that cellular and synaptic adaptation mechanisms alone may not suffice to account for the experimental results if the local network activity is read out by an integrator. However, a circuit that approximates a differentiator can detect the single-cell stimulation with a reliability that barely depends on the length or intensity of the stimulus, but that increases when an irregular signal is used. This finding is in accordance with the experimental results obtained for the stimulation of a regularly-spiking excitatory cell. It is widely assumed that only a large group of neurons can encode a stimulus or control behavior. This tenet of neuroscience has been challenged by experiments in which stimulating a single cortical neuron has had a measurable effect on an animal’s behavior. Recently, theoretical studies have explored how a single-neuron stimulation could be detected in a large recurrent network. However, these studies missed essential biological mechanisms of cortical networks and are unable to explain more recent experiments in the barrel cortex. Here, to describe the stimulated brain area, we propose and study a network model endowed with many important biological features of the barrel cortex. Importantly, we also investigate different readout mechanisms, i.e. ways in which the stimulation effects can propagate to other brain areas. We show that a readout network which tracks rapid variations in the local network activity is in agreement with the experiments. Our model demonstrates a possible mechanism for how the stimulation of a single neuron translates into a signal at the population level, which is taken as a proxy of the animal’s response. Our results illustrate the power of spiking neural networks to properly describe the effects of a single neuron’s activity.
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Affiliation(s)
- Davide Bernardi
- Bernstein Center for Computational Neuroscience Berlin, Berlin, Germany
- Institut für Physik, Humboldt-Universität zu Berlin, Berlin, Germany
- Center for Translational Neurophysiology of Speech and Communication, Fondazione Istituto Italiano di Tecnologia, Ferrara, Italy
- * E-mail:
| | - Guy Doron
- Bernstein Center for Computational Neuroscience Berlin, Berlin, Germany
| | - Michael Brecht
- Bernstein Center for Computational Neuroscience Berlin, Berlin, Germany
| | - Benjamin Lindner
- Bernstein Center for Computational Neuroscience Berlin, Berlin, Germany
- Institut für Physik, Humboldt-Universität zu Berlin, Berlin, Germany
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5
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Uzuntarla M, Torres JJ, Calim A, Barreto E. Synchronization-induced spike termination in networks of bistable neurons. Neural Netw 2019; 110:131-140. [DOI: 10.1016/j.neunet.2018.11.007] [Citation(s) in RCA: 28] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2018] [Revised: 11/16/2018] [Accepted: 11/20/2018] [Indexed: 10/27/2022]
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6
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Baijot S, Cevallos C, Zarka D, Leroy A, Slama H, Colin C, Deconinck N, Dan B, Cheron G. EEG Dynamics of a Go/Nogo Task in Children with ADHD. Brain Sci 2017; 7:brainsci7120167. [PMID: 29261133 PMCID: PMC5742770 DOI: 10.3390/brainsci7120167] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2017] [Revised: 12/07/2017] [Accepted: 12/15/2017] [Indexed: 01/08/2023] Open
Abstract
Background: Studies investigating event-related potential (ERP) evoked in a Cue-Go/NoGo paradigm have shown lower frontal N1, N2 and central P3 in children with attention-deficit/hyperactivity disorder (ADHD) compared to typically developing children (TDC). However, the electroencephalographic (EEG) dynamics underlying these ERPs remain largely unexplored in ADHD. Methods: We investigate the event-related spectral perturbation and inter-trial coherence linked to the ERP triggered by visual Cue-Go/NoGo stimuli, in 14 children (7 ADHD and 7 TDC) aged 8 to 12 years. Results: Compared to TDC, the EEG dynamics of children with ADHD showed a lower theta-alpha ITC concomitant to lower occipito-parietal P1-N2 and frontal N1-P2 potentials in response to Cue, Go and Nogo stimuli; an upper alpha power preceding lower central Go-P3; a lower theta-alpha power and ITC were coupled to a lower frontal Nogo-N3; a lower low-gamma power overall scalp at 300 ms after Go and Nogo stimuli. Conclusion: These findings suggest impaired ability in children with ADHD to conserve the brain oscillations phase associated with stimulus processing. This physiological trait might serve as a target for therapeutic intervention or be used as monitoring of their effects.
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Affiliation(s)
- Simon Baijot
- Department of Neurology, Hôpital Universitaire des Enfants Reine Fabiola, Université Libre de Bruxelles, 1020 Brussels, Belgium; (S.B.); (N.D.); (B.D.)
- Neuropsychology and Functional Neuroimaging Research Unit, Center for Research in Cognition and Neurosciences, Université Libre de Bruxelles, 1050 Brussels, Belgium;
- Cognitive Neurosciences Research Unit, Center for Research in Cognition and Neurosciences, Université Libre de Bruxelles, 1050 Brussels, Belgium;
| | - Carlos Cevallos
- Laboratory of Neurophysiology and Movement Biomechanics, Université Libre de Bruxelles, CP640, 808 route de Lennik, 1070 Brussels, Belgium; (C.C.); (D.Z.); (A.L.)
- Departamento de Ingeniería Mecánica, Facultad de Ingeniería Mecánica, Escuela Politécnica Nacional, Quito 170517, Ecuador
| | - David Zarka
- Laboratory of Neurophysiology and Movement Biomechanics, Université Libre de Bruxelles, CP640, 808 route de Lennik, 1070 Brussels, Belgium; (C.C.); (D.Z.); (A.L.)
- Research Unit in Osteopathy, Faculty of Motor Sciences, Université Libre de Bruxelles, 1070 Brussels, Belgium
| | - Axelle Leroy
- Laboratory of Neurophysiology and Movement Biomechanics, Université Libre de Bruxelles, CP640, 808 route de Lennik, 1070 Brussels, Belgium; (C.C.); (D.Z.); (A.L.)
| | - Hichem Slama
- Neuropsychology and Functional Neuroimaging Research Unit, Center for Research in Cognition and Neurosciences, Université Libre de Bruxelles, 1050 Brussels, Belgium;
- Cognitive Neurosciences Research Unit, Center for Research in Cognition and Neurosciences, Université Libre de Bruxelles, 1050 Brussels, Belgium;
- Department of Clinical and Cognitive Neuropsychology, Erasme Hospital, Université Libre de Bruxelles, 1070 Brussels, Belgium
| | - Cecile Colin
- Cognitive Neurosciences Research Unit, Center for Research in Cognition and Neurosciences, Université Libre de Bruxelles, 1050 Brussels, Belgium;
- Laboratory of Cognitive and Sensory Neurophysiology, CHU Brugmann, Université Libre de Bruxelles, 1020 Brussels, Belgium
| | - Nicolas Deconinck
- Department of Neurology, Hôpital Universitaire des Enfants Reine Fabiola, Université Libre de Bruxelles, 1020 Brussels, Belgium; (S.B.); (N.D.); (B.D.)
- Laboratory of Neurophysiology and Movement Biomechanics, Université Libre de Bruxelles, CP640, 808 route de Lennik, 1070 Brussels, Belgium; (C.C.); (D.Z.); (A.L.)
| | - Bernard Dan
- Department of Neurology, Hôpital Universitaire des Enfants Reine Fabiola, Université Libre de Bruxelles, 1020 Brussels, Belgium; (S.B.); (N.D.); (B.D.)
- Laboratory of Neurophysiology and Movement Biomechanics, Université Libre de Bruxelles, CP640, 808 route de Lennik, 1070 Brussels, Belgium; (C.C.); (D.Z.); (A.L.)
- Medical and Rehabilitation Departments, Inkendaal Rehabilitation Hospital, 1602 Vlezenbeek, Belgium
| | - Guy Cheron
- Laboratory of Neurophysiology and Movement Biomechanics, Université Libre de Bruxelles, CP640, 808 route de Lennik, 1070 Brussels, Belgium; (C.C.); (D.Z.); (A.L.)
- Laboratory of Electrophysiology, Université de Mons, 7000 Mons, Belgium
- Correspondence: ; Tel.: +32-25-553-403
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7
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Dipoppa M, Szwed M, Gutkin BS. Controlling Working Memory Operations by Selective Gating: The Roles of Oscillations and Synchrony. Adv Cogn Psychol 2016; 12:209-232. [PMID: 28154616 PMCID: PMC5280056 DOI: 10.5709/acp-0199-x] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2015] [Accepted: 10/18/2016] [Indexed: 11/23/2022] Open
Abstract
Working memory (WM) is a primary cognitive function that corresponds to the ability to update, stably maintain, and manipulate short-term memory (ST M) rapidly to perform ongoing cognitive tasks. A prevalent neural substrate of WM coding is persistent neural activity, the property of neurons to remain active after having been activated by a transient sensory stimulus. This persistent activity allows for online maintenance of memory as well as its active manipulation necessary for task performance. WM is tightly capacity limited. Therefore, selective gating of sensory and internally generated information is crucial for WM function. While the exact neural substrate of selective gating remains unclear, increasing evidence suggests that it might be controlled by modulating ongoing oscillatory brain activity. Here, we review experiments and models that linked selective gating, persistent activity, and brain oscillations, putting them in the more general mechanistic context of WM. We do so by defining several operations necessary for successful WM function and then discussing how such operations may be carried out by mechanisms suggested by computational models. We specifically show how oscillatory mechanisms may provide a rapid and flexible active gating mechanism for WM operations.
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Affiliation(s)
- Mario Dipoppa
- Institute of Neurology, Faculty of Brain Sciences, University College
London, UK
| | - Marcin Szwed
- Departement of Psychology, Jagiellonian University, Kraków,
Poland
| | - Boris S. Gutkin
- Center for Cognition and Decision Making, NR U HSE , Moscow,
Russia
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8
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Chan HK, Yang DP, Zhou C, Nowotny T. Burst Firing Enhances Neural Output Correlation. Front Comput Neurosci 2016; 10:42. [PMID: 27242499 PMCID: PMC4860405 DOI: 10.3389/fncom.2016.00042] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2016] [Accepted: 04/18/2016] [Indexed: 11/13/2022] Open
Abstract
Neurons communicate and transmit information predominantly through spikes. Given that experimentally observed neural spike trains in a variety of brain areas can be highly correlated, it is important to investigate how neurons process correlated inputs. Most previous work in this area studied the problem of correlation transfer analytically by making significant simplifications on neural dynamics. Temporal correlation between inputs that arises from synaptic filtering, for instance, is often ignored when assuming that an input spike can at most generate one output spike. Through numerical simulations of a pair of leaky integrate-and-fire (LIF) neurons receiving correlated inputs, we demonstrate that neurons in the presence of synaptic filtering by slow synapses exhibit strong output correlations. We then show that burst firing plays a central role in enhancing output correlations, which can explain the above-mentioned observation because synaptic filtering induces bursting. The observed changes of correlations are mostly on a long time scale. Our results suggest that other features affecting the prevalence of neural burst firing in biological neurons, e.g., adaptive spiking mechanisms, may play an important role in modulating the overall level of correlations in neural networks.
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Affiliation(s)
- Ho Ka Chan
- Centre for Computational Neuroscience and Robotics, School of Engineering and Informatics, University of SussexBrighton, UK
- Department of Physics, Hong Kong Baptist UniversityKowloon Tong, Hong Kong
- Centre for Nonlinear Studies, Institute of Computational and Theoretical Studies, Hong Kong Baptist UniversityKowloon Tong, Hong Kong
| | - Dong-Ping Yang
- Department of Physics, Hong Kong Baptist UniversityKowloon Tong, Hong Kong
- Centre for Nonlinear Studies, Institute of Computational and Theoretical Studies, Hong Kong Baptist UniversityKowloon Tong, Hong Kong
- School of Physics, University of SydneyNew South Wales, Sydney, NSW, Australia
| | - Changsong Zhou
- Department of Physics, Hong Kong Baptist UniversityKowloon Tong, Hong Kong
- Centre for Nonlinear Studies, Institute of Computational and Theoretical Studies, Hong Kong Baptist UniversityKowloon Tong, Hong Kong
| | - Thomas Nowotny
- Centre for Computational Neuroscience and Robotics, School of Engineering and Informatics, University of SussexBrighton, UK
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Logiaco L, Quilodran R, Procyk E, Arleo A. Spatiotemporal Spike Coding of Behavioral Adaptation in the Dorsal Anterior Cingulate Cortex. PLoS Biol 2015; 13:e1002222. [PMID: 26266537 PMCID: PMC4534466 DOI: 10.1371/journal.pbio.1002222] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/06/2015] [Accepted: 07/06/2015] [Indexed: 11/18/2022] Open
Abstract
The frontal cortex controls behavioral adaptation in environments governed by complex rules. Many studies have established the relevance of firing rate modulation after informative events signaling whether and how to update the behavioral policy. However, whether the spatiotemporal features of these neuronal activities contribute to encoding imminent behavioral updates remains unclear. We investigated this issue in the dorsal anterior cingulate cortex (dACC) of monkeys while they adapted their behavior based on their memory of feedback from past choices. We analyzed spike trains of both single units and pairs of simultaneously recorded neurons using an algorithm that emulates different biologically plausible decoding circuits. This method permits the assessment of the performance of both spike-count and spike-timing sensitive decoders. In response to the feedback, single neurons emitted stereotypical spike trains whose temporal structure identified informative events with higher accuracy than mere spike count. The optimal decoding time scale was in the range of 70-200 ms, which is significantly shorter than the memory time scale required by the behavioral task. Importantly, the temporal spiking patterns of single units were predictive of the monkeys' behavioral response time. Furthermore, some features of these spiking patterns often varied between jointly recorded neurons. All together, our results suggest that dACC drives behavioral adaptation through complex spatiotemporal spike coding. They also indicate that downstream networks, which decode dACC feedback signals, are unlikely to act as mere neural integrators.
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Affiliation(s)
- Laureline Logiaco
- INSERM, U968, Paris, France
- Sorbonne Universités, UPMC Univ Paris 06, UMR_S 968, Institut de la Vision, Paris, France
- CNRS, UMR_7210, Paris, France
- * E-mail: (LL); (AA)
| | - René Quilodran
- Escuela de Medicina, Departamento de Pre-clínicas, Universidad de Valparaíso, Hontaneda, Valparaíso, Chile
| | - Emmanuel Procyk
- Stem Cell and Brain Research Institute, Institut National de la Santé et de la Recherche Médicale U846, 69500 Bron, France
- Université de Lyon, Université Lyon 1, Lyon, France
| | - Angelo Arleo
- INSERM, U968, Paris, France
- Sorbonne Universités, UPMC Univ Paris 06, UMR_S 968, Institut de la Vision, Paris, France
- CNRS, UMR_7210, Paris, France
- * E-mail: (LL); (AA)
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Kreuz T, Mulansky M, Bozanic N. SPIKY: a graphical user interface for monitoring spike train synchrony. J Neurophysiol 2015; 113:3432-45. [PMID: 25744888 DOI: 10.1152/jn.00848.2014] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2014] [Accepted: 02/27/2015] [Indexed: 11/22/2022] Open
Abstract
Techniques for recording large-scale neuronal spiking activity are developing very fast. This leads to an increasing demand for algorithms capable of analyzing large amounts of experimental spike train data. One of the most crucial and demanding tasks is the identification of similarity patterns with a very high temporal resolution and across different spatial scales. To address this task, in recent years three time-resolved measures of spike train synchrony have been proposed, the ISI-distance, the SPIKE-distance, and event synchronization. The Matlab source codes for calculating and visualizing these measures have been made publicly available. However, due to the many different possible representations of the results the use of these codes is rather complicated and their application requires some basic knowledge of Matlab. Thus it became desirable to provide a more user-friendly and interactive interface. Here we address this need and present SPIKY, a graphical user interface that facilitates the application of time-resolved measures of spike train synchrony to both simulated and real data. SPIKY includes implementations of the ISI-distance, the SPIKE-distance, and the SPIKE-synchronization (an improved and simplified extension of event synchronization) that have been optimized with respect to computation speed and memory demand. It also comprises a spike train generator and an event detector that makes it capable of analyzing continuous data. Finally, the SPIKY package includes additional complementary programs aimed at the analysis of large numbers of datasets and the estimation of significance levels.
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Affiliation(s)
- Thomas Kreuz
- Institute for Complex Systems, National Research Council, Sesto Fiorentino, Italy
| | - Mario Mulansky
- Institute for Complex Systems, National Research Council, Sesto Fiorentino, Italy
| | - Nebojsa Bozanic
- Institute for Complex Systems, National Research Council, Sesto Fiorentino, Italy
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11
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DuRousseau DR, Beeton TA. System Level spatial-frequency EEG changes coincident with a 90-day cognitive-behavioral therapy program for couples in relationship distress. Brain Imaging Behav 2014; 9:597-608. [PMID: 25274224 PMCID: PMC4575684 DOI: 10.1007/s11682-014-9319-7] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
Abstract
Evaluating relationship intervention programs traditionally involves the use of self-report surveys or observational studies to assess changes in behavior. Instead, to investigate intervention-related changes in behavior, our study evaluates spatial-frequency electroencephalography (EEG) patterns from the brains of couples participating in an Imago Relationship workshop and 12 weeks of group counseling sessions lasting approximately 90 days. This explorative study recorded 32-channel EEGs from nine committed distressed couples prior to, during and immediately following the Imago Relationship Therapy program. A repeated measures t-Test approach was applied to investigate if significant group level brain pattern changes could be identified in key resting state networks in the brains of the participants that could be correlated with changes in relationship outcome. The study results show that significant reductions in EEG power in the alpha2, beta3 and gamma bands were evident in the averaged brain activity in the pre-frontal, frontal and temporal-parietal cortices that are anatomically associated with the frontal executive, default mode and salience networks of the human brain. Our current understanding of system level neural connectivity and network dynamics strongly indicates that each of these systems is integrally required in learning and implementing a complex communication process taught in the Imago intervention. Thus, a high degree of hemispheric lateralization is consistent with our understanding of language function and mood regulation in the brain and is consistent with recent research into the use of resting frontal EEG asymmetry as an indicator of behavioral changes in distressed couples undergoing a program for relationship improvement. Although preliminary, these results further indicate that the EEG is an inexpensive and easily quantifiable measure, and possibly predictor, of behavioral changes in response to a cognitive behavioral intervention.
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Affiliation(s)
| | - Theresa A Beeton
- Loudoun Family and Relationship Counseling, Inc., Leesburg, VA, USA.
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12
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Rosenbaum R, Tchumatchenko T, Moreno-Bote R. Correlated neuronal activity and its relationship to coding, dynamics and network architecture. Front Comput Neurosci 2014; 8:102. [PMID: 25221504 PMCID: PMC4145255 DOI: 10.3389/fncom.2014.00102] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2014] [Accepted: 08/07/2014] [Indexed: 11/13/2022] Open
Affiliation(s)
- Robert Rosenbaum
- Department of Applied and Computational Mathematics and Statistics, University of Notre Dame Notre Dame, IN, USA ; Center for the Neural Basis of Cognition Pittsburgh, PA, USA
| | - Tatjana Tchumatchenko
- Department Theory of Neural Dynamics, Max Planck Institute for Brain Research Frankfurt am Main, Germany
| | - Rubén Moreno-Bote
- Research Unit, Parc Sanitari Sant Joan de Déu and Universitat de Barcelona Barcelona, Spain ; Centro de Investigación Biomédica en Red de Salud Mental (CIBERSAM) Barcelona, Spain
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