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Babaie-Janvier T, Gabay NC, McInnes A, Robinson PA. Neural field theory of adaptive effects on auditory evoked responses and mismatch negativity in multifrequency stimulus sequences. Front Hum Neurosci 2024; 17:1282924. [PMID: 38234595 PMCID: PMC10791997 DOI: 10.3389/fnhum.2023.1282924] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2023] [Accepted: 10/27/2023] [Indexed: 01/19/2024] Open
Abstract
Physiologically based neural field theory (NFT) of the corticothalamic system, including adaptation, is used to calculate the responses evoked by trains of auditory stimuli that differ in frequency. In oddball paradigms, fully distinguishable frequencies lead to different standard (common stimulus) and deviant (rare stimulus) responses; the signal obtained by subtracting the standard response from the deviant is termed the mismatch negativity (MMN). In this analysis, deviant responses are found to correspond to unadapted cortex, whereas the part of auditory cortex that processes the standard stimuli adapts over several stimulus presentations until the final standard response form is achieved. No higher-order memory processes are invoked. In multifrequency experiments, the deviant response approaches the standard one as the deviant frequency approaches that of the standard and analytic criteria for this effect to be obtained. It is shown that these criteria can also be used to understand adaptation in random tone sequences. A method of probing MMNs and adaptation in random tone sequences is suggested to makes more use of such data.
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Affiliation(s)
- Tahereh Babaie-Janvier
- School of Physics, The University of Sydney, Sydney, NSW, Australia
- Center of Excellence for Integrative Brain Function, The University of Sydney, Sydney, NSW, Australia
| | - Natasha C. Gabay
- School of Physics, The University of Sydney, Sydney, NSW, Australia
- Center of Excellence for Integrative Brain Function, The University of Sydney, Sydney, NSW, Australia
| | | | - Peter A. Robinson
- School of Physics, The University of Sydney, Sydney, NSW, Australia
- Center of Excellence for Integrative Brain Function, The University of Sydney, Sydney, NSW, Australia
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Robinson PA, Gabay NC, Babaie-Janvier T. Neural Field Theory of Evoked Response Sequences and Mismatch Negativity With Adaptation. Front Hum Neurosci 2021; 15:655505. [PMID: 34483860 PMCID: PMC8415526 DOI: 10.3389/fnhum.2021.655505] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2021] [Accepted: 07/20/2021] [Indexed: 12/02/2022] Open
Abstract
Physiologically based neural field theory of the corticothalamic system is used to calculate the responses evoked by trains of auditory stimuli that correspond to different cortical locations via the tonotopic map. The results are shown to account for standard and deviant evoked responses to frequent and rare stimuli, respectively, in the auditory oddball paradigms widely used in human cognitive studies, and the so-called mismatch negativity between them. It also reproduces a wide range of other effects and variants, including the mechanism by which a change in standard responses relative to deviants can develop through adaptation, different responses when two deviants are presented in a row or a standard is presented after two deviants, relaxation of standard responses back to deviant form after a stimulus-free period, and more complex sequences. Some cases are identified in which adaptation does not account for the whole difference between standard and deviant responses. The results thus provide a systematic means to determine how much of the response is due to adaptation in the system comprising the primary auditory cortex and medial geniculate nucleus, and how much requires involvement of higher-level processing.
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Affiliation(s)
- Peter A Robinson
- School of Physics, University of Sydney, Sydney, NSW, Australia.,Center of Excellence for Integrative Brain Function, University of Sydney, Sydney, NSW, Australia
| | - Natasha C Gabay
- School of Physics, University of Sydney, Sydney, NSW, Australia.,Center of Excellence for Integrative Brain Function, University of Sydney, Sydney, NSW, Australia
| | - Tara Babaie-Janvier
- School of Physics, University of Sydney, Sydney, NSW, Australia.,Center of Excellence for Integrative Brain Function, University of Sydney, Sydney, NSW, Australia
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Robinson PA, Henderson JA, Gabay NC, Aquino KM, Babaie-Janvier T, Gao X. Determination of Dynamic Brain Connectivity via Spectral Analysis. Front Hum Neurosci 2021; 15:655576. [PMID: 34335207 PMCID: PMC8323754 DOI: 10.3389/fnhum.2021.655576] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2021] [Accepted: 06/03/2021] [Indexed: 11/30/2022] Open
Abstract
Spectral analysis based on neural field theory is used to analyze dynamic connectivity via methods based on the physical eigenmodes that are the building blocks of brain dynamics. These approaches integrate over space instead of averaging over time and thereby greatly reduce or remove the temporal averaging effects, windowing artifacts, and noise at fine spatial scales that have bedeviled the analysis of dynamical functional connectivity (FC). The dependences of FC on dynamics at various timescales, and on windowing, are clarified and the results are demonstrated on simple test cases, demonstrating how modes provide directly interpretable insights that can be related to brain structure and function. It is shown that FC is dynamic even when the brain structure and effective connectivity are fixed, and that the observed patterns of FC are dominated by relatively few eigenmodes. Common artifacts introduced by statistical analyses that do not incorporate the physical nature of the brain are discussed and it is shown that these are avoided by spectral analysis using eigenmodes. Unlike most published artificially discretized “resting state networks” and other statistically-derived patterns, eigenmodes overlap, with every mode extending across the whole brain and every region participating in every mode—just like the vibrations that give rise to notes of a musical instrument. Despite this, modes are independent and do not interact in the linear limit. It is argued that for many purposes the intrinsic limitations of covariance-based FC instead favor the alternative of tracking eigenmode coefficients vs. time, which provide a compact representation that is directly related to biophysical brain dynamics.
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Affiliation(s)
- Peter A Robinson
- School of Physics, University of Sydney, Sydney, NSW, Australia.,Center of Excellence for Integrative Brain Function, University of Sydney, Sydney, NSW, Australia
| | - James A Henderson
- School of Physics, University of Sydney, Sydney, NSW, Australia.,Center of Excellence for Integrative Brain Function, University of Sydney, Sydney, NSW, Australia
| | - Natasha C Gabay
- School of Physics, University of Sydney, Sydney, NSW, Australia.,Center of Excellence for Integrative Brain Function, University of Sydney, Sydney, NSW, Australia
| | - Kevin M Aquino
- School of Physics, University of Sydney, Sydney, NSW, Australia.,Center of Excellence for Integrative Brain Function, University of Sydney, Sydney, NSW, Australia
| | - Tara Babaie-Janvier
- School of Physics, University of Sydney, Sydney, NSW, Australia.,Center of Excellence for Integrative Brain Function, University of Sydney, Sydney, NSW, Australia
| | - Xiao Gao
- School of Physics, University of Sydney, Sydney, NSW, Australia.,Center of Excellence for Integrative Brain Function, University of Sydney, Sydney, NSW, Australia.,Department of Biomedical Engineering, University of Melbourne, Parkville, VIC, Australia
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El-Zghir RK, Gabay NC, Robinson PA. Modal-Polar Representation of Evoked Response Potentials in Multiple Arousal States. Front Hum Neurosci 2021; 15:642479. [PMID: 34163339 PMCID: PMC8215109 DOI: 10.3389/fnhum.2021.642479] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2020] [Accepted: 05/10/2021] [Indexed: 11/13/2022] Open
Abstract
An expansion of the corticothalamic transfer function into eigenmodes and resonant poles is used to derive a simple formula for evoked response potentials (ERPs) in various states of arousal. The transfer function corresponds to the cortical response to an external stimulus, which encodes all the information and properties of the linear system. This approach links experimental observations of resonances and characteristic timescales in brain activity with physically based neural field theory (NFT). The present work greatly simplifies the formula of the analytical ERP, and separates its spatial part (eigenmodes) from the temporal part (poles). Within this framework, calculations involve contour integrations that yield an explicit expression for ERPs. The dominant global mode is considered explicitly in more detail to study how the ERP varies with time in this mode and to illustrate the method. For each arousal state in sleep and wake, the resonances of the system are determined and it is found that five poles are sufficient to study the main dynamics of the system in waking eyes-open and eyes-closed states. Similarly, it is shown that six poles suffice to reproduce ERPs in rapid-eye movement sleep, sleep state 1, and sleep state 2 states, whereas just four poles suffice to reproduce the dynamics in slow wave sleep. Thus, six poles are sufficient to preserve the main global ERP dynamics of the system for all states of arousal. These six poles correspond to the dominant resonances of the system at slow-wave, alpha, and beta frequencies. These results provide the basis for simplified analytic treatment of brain dynamics and link observations more closely to theory.
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Affiliation(s)
- Rawan K El-Zghir
- School of Physics, University of Sydney, Sydney, NSW, Australia.,Center for Integrative Brain Function, University of Sydney, Sydney, NSW, Australia
| | - Natasha C Gabay
- School of Physics, University of Sydney, Sydney, NSW, Australia.,Center for Integrative Brain Function, University of Sydney, Sydney, NSW, Australia
| | - Peter A Robinson
- School of Physics, University of Sydney, Sydney, NSW, Australia.,Center for Integrative Brain Function, University of Sydney, Sydney, NSW, Australia
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