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Cheng GP, Wang YF, Li YY, Guo SM, Li HG, Ji DM, Yi NH, Zhou LQ. Deficiency of nucleosome-destabilizing factor GLYR1 dampens spermatogenesis in mice. Mol Cell Endocrinol 2024; 586:112194. [PMID: 38395189 DOI: 10.1016/j.mce.2024.112194] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 12/09/2023] [Revised: 02/13/2024] [Accepted: 02/20/2024] [Indexed: 02/25/2024]
Abstract
Aberrant sperm morphology hinders sperm motility and causes male subfertility. Spermatogenesis, a complex process in male germ cell development, necessitates precise regulation of numerous developmental genes. However, the regulatory pathways involved in this process remain partially understood. We have observed the widespread expression of Glyr1, the gene encoding a nucleosome-destabilizing factor, in mouse testicular cells. Our study demonstrates that mice experiencing Glyr1 depletion in spermatogenic cells exhibit subfertility characterized by a diminished count and motility of spermatozoa. Furthermore, the rate of sperm malformation significantly increases in the absence of Glyr1, with a predominant occurrence of head and neck malformation in spermatozoa within the cauda epididymis. Additionally, a reduction in spermatocyte numbers across different meiotic stages is observed, accompanied by diminished histone acetylation in spermatogenic cells upon Glyr1 depletion. Our findings underscore the crucial roles of Glyr1 in mouse spermiogenesis and unveil novel insights into the etiology of male reproductive diseases.
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Affiliation(s)
- Gui-Ping Cheng
- Department of Women Health Care, Maternal and Child Health Hospital of Hubei Province, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
| | - Yu-Fan Wang
- Institute of Reproductive Health, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
| | - Yuan-Yuan Li
- Department of Gynecology and Obstetrics, The Central Hospital of Wuhan, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
| | - Shi-Meng Guo
- Institute of Reproductive Health, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
| | - Hong-Gang Li
- Institute of Reproductive Health, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
| | - Dong-Mei Ji
- NHC Key Laboratory of Study on Abnormal Gametes and Reproductive Tract, Anhui Medical University, Anhui, China.
| | - Nian-Hua Yi
- Department of Women Health Care, Maternal and Child Health Hospital of Hubei Province, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China.
| | - Li-Quan Zhou
- NHC Key Laboratory of Study on Abnormal Gametes and Reproductive Tract, Anhui Medical University, Anhui, China.
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Zhang D, Wei X, Liu Z, Wu X, Bao C, Sun Y, Su N, Cui J. Transcriptome Analysis Reveals the Molecular Mechanism of GABA Accumulation during Quinoa ( Chenopodium quinoa Willd.) Germination. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2021; 69:12171-12186. [PMID: 34610747 DOI: 10.1021/acs.jafc.1c02933] [Citation(s) in RCA: 22] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
Quinoa (Chenopodium quinoa Willd.) with a history of 5000 years as food is extremely rich in nutrients and bioactive compounds, including γ-aminobutyric acid (GABA), a natural four-carbon non-protein amino acid with great benefits to human health. In quinoa, GABA generally increases with the germination time, but the underlying molecular mechanism is unclear. Here, we found that the GABA content in quinoa varied significantly among 25 varieties using an automatic amino acid analyzer. Next, six varieties (three low-GABA and three high-GABA varieties) were used for further analyses. The content of GABA in six varieties all showed an increasing trend after germination. In addition, Pearson's correlation analysis showed that the changes in GABA content were closely related to the transcript level or enzyme activity of three key enzymes including glutamate decarboxylase (GAD), GABA transaminase (GABA-T), and succinate-semialdehyde dehydrogenase (SSADH) in the GABA shunt, especially GAD. Based on RNA-sequencing analysis, eight GAD genes, two GABA-T genes, one SSADH gene, nine polyamine oxidase (PAO) genes, five diamine oxidase (DAO) genes, four 4-aminobutyraldehyde dehydrogenase (BADH) genes, and three thermospermine synthase ACAULIS5 (ACL5) genes were identified. Among these, CqGAD8 and CqGABA-T2 may make a greater contribution to GABA accumulation during quinoa germination.
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Affiliation(s)
- Derui Zhang
- College of Life Sciences, Nanjing Agricultural University, Nanjing 210095, China
| | - Xiaonan Wei
- College of Life Sciences, Nanjing Agricultural University, Nanjing 210095, China
| | - Ze Liu
- College of Life Sciences, Nanjing Agricultural University, Nanjing 210095, China
| | - Xiangyun Wu
- Shanxi Jiaqi Quinoa Dev Company Limited, Shuozhou 038600, China
| | - Changjian Bao
- College of Life Sciences, Nanjing Agricultural University, Nanjing 210095, China
| | - Yuzhe Sun
- Nanjing Foreign Language School, Nanjing 210095, China
| | - Nana Su
- College of Life Sciences, Nanjing Agricultural University, Nanjing 210095, China
| | - Jin Cui
- College of Life Sciences, Nanjing Agricultural University, Nanjing 210095, China
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Shelp BJ, Aghdam MS, Flaherty EJ. γ-Aminobutyrate (GABA) Regulated Plant Defense: Mechanisms and Opportunities. PLANTS (BASEL, SWITZERLAND) 2021; 10:1939. [PMID: 34579473 PMCID: PMC8468876 DOI: 10.3390/plants10091939] [Citation(s) in RCA: 35] [Impact Index Per Article: 11.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/27/2021] [Revised: 09/13/2021] [Accepted: 09/14/2021] [Indexed: 02/07/2023]
Abstract
Global climate change and associated adverse abiotic and biotic stress conditions affect plant growth and development, and agricultural sustainability in general. Abiotic and biotic stresses reduce respiration and associated energy generation in mitochondria, resulting in the elevated production of reactive oxygen species (ROS), which are employed to transmit cellular signaling information in response to the changing conditions. Excessive ROS accumulation can contribute to cell damage and death. Production of the non-protein amino acid γ-aminobutyrate (GABA) is also stimulated, resulting in partial restoration of respiratory processes and energy production. Accumulated GABA can bind directly to the aluminum-activated malate transporter and the guard cell outward rectifying K+ channel, thereby improving drought and hypoxia tolerance, respectively. Genetic manipulation of GABA metabolism and receptors, respectively, reveal positive relationships between GABA levels and abiotic/biotic stress tolerance, and between malate efflux from the root and heavy metal tolerance. The application of exogenous GABA is associated with lower ROS levels, enhanced membrane stability, changes in the levels of non-enzymatic and enzymatic antioxidants, and crosstalk among phytohormones. Exogenous GABA may be an effective and sustainable tolerance strategy against multiple stresses under field conditions.
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Affiliation(s)
- Barry J. Shelp
- Department of Plant Agriculture, University of Guelph, Guelph, ON N1G 2W1, Canada;
| | - Morteza Soleimani Aghdam
- Department of Horticultural Science, Imam Khomeini International University, Qazvin 34148-96818, Iran;
| | - Edward J. Flaherty
- Department of Plant Agriculture, University of Guelph, Guelph, ON N1G 2W1, Canada;
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Shi M, Zhao L, Wang Y. Identification and Characterization of Genes Encoding the Hydroxypyruvate Reductases in Chlamydomonas Reveal Their Distinct Roles in Photorespiration. FRONTIERS IN PLANT SCIENCE 2021; 12:690296. [PMID: 34249060 PMCID: PMC8264790 DOI: 10.3389/fpls.2021.690296] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/02/2021] [Accepted: 05/31/2021] [Indexed: 06/13/2023]
Abstract
Photorespiration plays an important role in maintaining normal physiological metabolism in higher plants and other oxygenic organisms, such as algae. The unicellular eukaryotic organism Chlamydomonas is reported to have a photorespiration system different from that in higher plants, and only two out of nine genes encoding photorespiratory enzymes have been experimentally characterized. Hydroxypyruvate reductase (HPR), which is responsible for the conversion of hydroxypyruvate into glycerate, is poorly understood and not yet explored in Chlamydomonas. To identify the candidate genes encoding hydroxypyruvate reductases in Chlamydomonas (CrHPR) and uncover their elusive functions, we performed sequence comparison, enzyme activity measurement, subcellular localization, and analysis of knockout/knockdown strains. Together, we identify five proteins to be good candidates for CrHPRs, all of which are detected with the activity of hydroxypyruvate reductase. CrHPR1, a nicotinamide adenine dinucleotide (NADH)-dependent enzyme in mitochondria, may function as the major component of photorespiration. Its deletion causes severe photorespiratory defects. CrHPR2 takes part in the cytosolic bypass of photorespiration as the compensatory pathway of CrHPR1 for the reduction of hydroxypyruvate. CrHPR4, with NADH as the cofactor, may participate in photorespiration by acting as the chloroplastidial glyoxylate reductase in glycolate-quinone oxidoreductase system. Therefore, the results reveal that CrHPRs are far more complex than previously recognized and provide a greatly expanded knowledge base for studies to understand how CrHPRs perform their functions in photorespiration. These will facilitate both modification of photorespiration and genetic engineering for crop improvement by synthetic biology.
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Affiliation(s)
- Menglin Shi
- College of Life Sciences, Nankai University, Tianjin, China
| | - Lei Zhao
- Key Laboratory of Systems Microbial Biotechnology, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China
- National Center of Technology Innovation for Synthetic Biology, Tianjin, China
| | - Yong Wang
- College of Life Sciences, Nankai University, Tianjin, China
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Validation of molecular response of tuberization in response to elevated temperature by using a transient Virus Induced Gene Silencing (VIGS) in potato. Funct Integr Genomics 2021; 21:215-229. [PMID: 33611637 DOI: 10.1007/s10142-021-00771-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2020] [Revised: 11/25/2020] [Accepted: 01/30/2021] [Indexed: 10/22/2022]
Abstract
Temperature plays an important role in potato tuberization. The ideal night temperature for tuber formation is ~17 °C while temperature beyond 22 °C drastically reduces the tuber yield. Moreover, high temperature has several undesirable effects on the plant and tubers. Investigation of the genes involved in tuberization under heat stress can be helpful in the generation of heat-tolerant potato varieties. Five genes, including StSSH2 (succinic semialdehyde reductase isoform 2), StWTF (WRKY transcription factor), StUGT (UDP-glucosyltransferase), StBHP (Bel1 homeotic protein), and StFLTP (FLOWERING LOCUS T protein), involved in tuberization and heat stress in potato were investigated. The results of our microarray analysis suggested that these genes regulate and function as transcriptional factors, hormonal signaling, cellular homeostasis, and mobile tuberization signals under elevated temperature in contrasting KS (Kufri Surya) and KCM (Kufri Chandramukhi) potato cultivars. However, no detailed report is available which establishes functions of these genes in tuberization under heat stress. Thus, the present study was designed to validate the functions of these genes in tuber signaling and heat tolerance using virus-induced gene silencing (VIGS). Results indicated that VIGS transformed plants had a consequential reduction in StSSH2, StWTF, StUGT, StBHP, and StFLTP transcripts compared to the control plants. Phenotypic observations suggest an increase in plant senescence, reductions to both number and size of tubers, and a decrease in plant dry matter compared to the control plants. We also establish the potency of VIGS as a high-throughput technique for functional validation of genes.
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The lineage and diversity of putative amino acid sensor ACR proteins in plants. Amino Acids 2020; 52:649-666. [PMID: 32306102 DOI: 10.1007/s00726-020-02844-1] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2019] [Accepted: 04/11/2020] [Indexed: 10/24/2022]
Abstract
Amino acid metabolic enzymes often contain a regulatory ACT domain, named for aspartate kinase, chorismate mutase, and TyrA (prephenate dehydrogenase). Arabidopsis encodes 12 putative amino acid sensor ACT repeat (ACR) proteins, all containing ACT repeats but no identifiable catalytic domain. Arabidopsis ACRs comprise three groups based on domain composition and sequence: group I and II ACRs contain four ACTs each, and group III ACRs contain two ACTs. Previously, all three groups had been documented only in Arabidopsis. Here, we extended this to algae and land plants, showing that all three groups of ACRs are present in most, if not all, land plants, whereas among algal ACRs, although quite diverse, only group III is conserved. The appearance of canonical group I and II ACRs thus accompanied the evolution of plants from living in water to living on land. Alignment of ACTs from plant ACRs revealed a conserved motif, DRPGLL, at the putative ligand-binding site. Notably, the unique features of the DRPGLL motifs in each ACT domain are conserved in ACRs from algae to land plants. The conservation of plant ACRs is reminiscent of that of human cellular arginine sensor for mTORC1 (CASTOR1), a member of a small protein family highly conserved in animals. CASTOR proteins also have four ACT domains, although the sequence identities between ACRs and CASTORs are very low. Thus, plant ACRs and animal CASTORs may have adapted the regulatory ACT domains from a more ancient metabolic enzyme, and then evolved independently.
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Brikis CJ, Zarei A, Chiu GZ, Deyman KL, Liu J, Trobacher CP, Hoover GJ, Subedi S, DeEll JR, Bozzo GG, Shelp BJ. Targeted quantitative profiling of metabolites and gene transcripts associated with 4-aminobutyrate (GABA) in apple fruit stored under multiple abiotic stresses. HORTICULTURE RESEARCH 2018; 5:61. [PMID: 30510768 PMCID: PMC6269452 DOI: 10.1038/s41438-018-0069-3] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/22/2018] [Revised: 06/14/2018] [Accepted: 06/15/2018] [Indexed: 05/02/2023]
Abstract
4-Aminobutyrate accumulates in plants under abiotic stress. Here, targeted quantitative profiling of metabolites and transcripts was conducted to monitor glutamate- and polyamine-derived 4-aminobutyrate production and its subsequent catabolism to succinate or 4-hydroxybutyrate in apple (Malus x domestica Borkh.) fruit stored at 0 °C with 2.5 kPa O2 and 0.03 or 5 kPa CO2 for 16 weeks. Low-temperature-induced protein hydrolysis appeared to be responsible for the enhanced availability of amino acids during early storage, and the resulting higher glutamate level stimulated 4-aminobutyrate levels more than polyamines. Elevated CO2 increased the levels of polyamines, as well as succinate and 4-hydroxybutyrate, during early storage, and 4-aminobutyrate and 4-hydroxybutyrate over the longer term. Expression of all of the genes likely involved in 4-aminobutyrate metabolism from glutamate/polyamines to succinate/4-hydroxybutyrate was induced in a co-ordinated manner. CO2-regulated expression of apple GLUTAMATE DECARBOXYLASE 2, AMINE OXIDASE 1, ALDEHYDE DEHYDROGENASE 10A8 and POLYAMINE OXIDASE 2 was evident with longer term storage. Evidence suggested that respiratory activities were restricted by the elevated CO2/O2 environment, and that decreasing NAD+ availability and increasing NADPH and NADPH/NADP+, respectively, played key roles in the regulation of succinate and 4-hydroxybutyate accumulation. Together, these findings suggest that both transcriptional and biochemical mechanisms are associated with 4-aminobutyrate and 4-hydroxybutyrate metabolism in apple fruit stored under multiple abiotic stresses.
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Affiliation(s)
- Carolyne J. Brikis
- Department of Plant Agriculture, University of Guelph, Guelph, Ontario N1G 2W1 Canada
| | - Adel Zarei
- Department of Plant Agriculture, University of Guelph, Guelph, Ontario N1G 2W1 Canada
| | - Greta Z. Chiu
- Department of Plant Agriculture, University of Guelph, Guelph, Ontario N1G 2W1 Canada
| | - Kristen L. Deyman
- Department of Plant Agriculture, University of Guelph, Guelph, Ontario N1G 2W1 Canada
| | - Jingyun Liu
- Department of Plant Agriculture, University of Guelph, Guelph, Ontario N1G 2W1 Canada
| | | | - Gordon J. Hoover
- Department of Plant Agriculture, University of Guelph, Guelph, Ontario N1G 2W1 Canada
| | - Sanjeena Subedi
- Department of Mathematical Sciences, Binghamton University, Binghamton, NY 13902 USA
| | - Jennifer R. DeEll
- Ontario Ministry of Agriculture, Food and Rural Affairs, Box 587, 1283 Blueline Rd. at Highway 3, Simcoe, Ontario N3Y 4N5 Canada
| | - Gale G. Bozzo
- Department of Plant Agriculture, University of Guelph, Guelph, Ontario N1G 2W1 Canada
| | - Barry J. Shelp
- Department of Plant Agriculture, University of Guelph, Guelph, Ontario N1G 2W1 Canada
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Zarei A, Brikis CJ, Bajwa VS, Chiu GZ, Simpson JP, DeEll JR, Bozzo GG, Shelp BJ. Plant Glyoxylate/Succinic Semialdehyde Reductases: Comparative Biochemical Properties, Function during Chilling Stress, and Subcellular Localization. FRONTIERS IN PLANT SCIENCE 2017; 8:1399. [PMID: 28855911 PMCID: PMC5558127 DOI: 10.3389/fpls.2017.01399] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/03/2017] [Accepted: 07/27/2017] [Indexed: 05/18/2023]
Abstract
Plant NADPH-dependent glyoxylate/succinic semialdehyde reductases 1 and 2 (cytosolic GLYR1 and plastidial/mitochondrial GLYR2) are considered to be of particular importance under abiotic stress conditions. Here, the apple (Malus × domestica Borkh.) and rice (Oryza sativa L.) GLYR1s and GLYR2s were characterized and their kinetic properties were compared to those of previously characterized GLYRs from Arabidopsis thaliana [L.] Heynh. The purified recombinant GLYRs had an affinity for glyoxylate and succinic semialdehyde, respectively, in the low micromolar and millimolar ranges, and were inhibited by NADP+. Comparison of the GLYR activity in cell-free extracts from wild-type Arabidopsis and a glyr1 knockout mutant revealed that approximately 85 and 15% of the cellular GLYR activity is cytosolic and plastidial/mitochondrial, respectively. Recovery of GLYR activity in purified mitochondria from the Arabidopsis glyr1 mutant, free from cytosolic GLYR1 or plastidial GLYR2 contamination, provided additional support for the targeting of GLYR2 to mitochondria, as well as plastids. The growth of plantlets or roots of various Arabidopsis lines with altered GLYR activity responded differentially to succinic semialdehyde or glyoxylate under chilling conditions. Taken together, these findings highlight the potential regulation of highly conserved plant GLYRs by NADPH/NADP+ ratios in planta, and their roles in the reduction of toxic aldehydes in plants subjected to chilling stress.
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Affiliation(s)
- Adel Zarei
- Department of Plant Agriculture, University of Guelph, GuelphON, Canada
| | | | | | - Greta Z. Chiu
- Department of Plant Agriculture, University of Guelph, GuelphON, Canada
| | | | - Jennifer R. DeEll
- Ontario Ministry of Agriculture, Food and Rural Affairs, SimcoeON, Canada
| | - Gale G. Bozzo
- Department of Plant Agriculture, University of Guelph, GuelphON, Canada
| | - Barry J. Shelp
- Department of Plant Agriculture, University of Guelph, GuelphON, Canada
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Shelp BJ, Zarei A. Subcellular compartmentation of 4-aminobutyrate (GABA) metabolism in arabidopsis: An update. PLANT SIGNALING & BEHAVIOR 2017; 12:e1322244. [PMID: 28448196 PMCID: PMC5501244 DOI: 10.1080/15592324.2017.1322244] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/05/2017] [Revised: 04/16/2017] [Accepted: 04/17/2017] [Indexed: 05/18/2023]
Abstract
This addendum discusses the compartmentation of γ-aminobutyrate (GABA) metabolism, highlighting recent progress with Arabidopsis thaliana and raising new questions about the roles of mitochondria, plastids and peroxisomes in abiotic stress tolerance.
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Affiliation(s)
- Barry J. Shelp
- Department of Plant Agriculture, University of Guelph, Guelph, ON, Canada
- CONTACT Barry J. Shelp Plant Agriculture, University of Guelph, 50 Stone Rd. E, Guelph, Ontario N1G 2W1, Canada
| | - Adel Zarei
- Department of Plant Agriculture, University of Guelph, Guelph, ON, Canada
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