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Zheng S, Wei S, Li J, Wang J, Deng Z, Gu R, Fan S, Liu G. The Phenotypic Variation in Moso Bamboo and the Selection of Key Traits. PLANTS (BASEL, SWITZERLAND) 2024; 13:1625. [PMID: 38931057 PMCID: PMC11207448 DOI: 10.3390/plants13121625] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/29/2024] [Revised: 06/06/2024] [Accepted: 06/08/2024] [Indexed: 06/28/2024]
Abstract
This research aimed to explore the diverse phenotypic characteristics of moso bamboo in China and pinpoint essential characteristics of moso bamboo. In this study, 63 grids were selected using the grid method to investigate 28 phenotypic traits of moso bamboo across the entire distribution area of China. The results suggest that the phenotypic traits of moso bamboo exhibit rich diversity, with coefficients of variation ranging from 5.87% to 36.57%. The phenotypic traits of moso bamboo showed varying degrees of correlation. A principal component analysis was used to identify seven main phenotypic trait indicators: diameter at breast height (DBH), leaf area (LA), leaf weight (LW), branch-to-leaf ratio (BLr), leaf moisture content (Lmc), wall-to-cavity ratio (WCr), and node length at breast height (LN), which accounted for 81.64% of the total information. A random forest model was used, which gave good results to validate the results. The average combined phenotypic trait value (D-value) of most germplasm was 0.563. The highest D-value was found in Wuyi 1 moso in Fujian (0.803), while the lowest D-value was observed in Pingle 2 moso in Guangxi (0.317). The clustering analysis of phenotypic traits classified China's moso bamboo germplasm into four groups. Group I had the highest D-value and is an important candidate germplasm for excellent germplasm screening.
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Affiliation(s)
- Shihui Zheng
- International Centre for Bamboo and Rattan, Key Laboratory of National Forestry and Grassland Administration, Beijing 100102, China; (S.Z.); (S.W.); (J.L.); (J.W.); (Z.D.); (R.G.); (S.F.)
- Yunnan Diannan Bamboo Forest Ecosystem Research Station, Cangyuan County, Lincang 677400, China
| | - Songpo Wei
- International Centre for Bamboo and Rattan, Key Laboratory of National Forestry and Grassland Administration, Beijing 100102, China; (S.Z.); (S.W.); (J.L.); (J.W.); (Z.D.); (R.G.); (S.F.)
- Yunnan Diannan Bamboo Forest Ecosystem Research Station, Cangyuan County, Lincang 677400, China
| | - Jiarui Li
- International Centre for Bamboo and Rattan, Key Laboratory of National Forestry and Grassland Administration, Beijing 100102, China; (S.Z.); (S.W.); (J.L.); (J.W.); (Z.D.); (R.G.); (S.F.)
| | - Jingsheng Wang
- International Centre for Bamboo and Rattan, Key Laboratory of National Forestry and Grassland Administration, Beijing 100102, China; (S.Z.); (S.W.); (J.L.); (J.W.); (Z.D.); (R.G.); (S.F.)
| | - Ziyun Deng
- International Centre for Bamboo and Rattan, Key Laboratory of National Forestry and Grassland Administration, Beijing 100102, China; (S.Z.); (S.W.); (J.L.); (J.W.); (Z.D.); (R.G.); (S.F.)
| | - Rui Gu
- International Centre for Bamboo and Rattan, Key Laboratory of National Forestry and Grassland Administration, Beijing 100102, China; (S.Z.); (S.W.); (J.L.); (J.W.); (Z.D.); (R.G.); (S.F.)
| | - Shaohui Fan
- International Centre for Bamboo and Rattan, Key Laboratory of National Forestry and Grassland Administration, Beijing 100102, China; (S.Z.); (S.W.); (J.L.); (J.W.); (Z.D.); (R.G.); (S.F.)
| | - Guanglu Liu
- International Centre for Bamboo and Rattan, Key Laboratory of National Forestry and Grassland Administration, Beijing 100102, China; (S.Z.); (S.W.); (J.L.); (J.W.); (Z.D.); (R.G.); (S.F.)
- Yunnan Diannan Bamboo Forest Ecosystem Research Station, Cangyuan County, Lincang 677400, China
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Zhang W, Ye L, Fang H. Astragaloside IV Improve Neurological Function of Cerebral Ischemia. J BIOMATER TISS ENG 2022. [DOI: 10.1166/jbt.2022.3102] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
This study intends to assess astragaloside IV’s effect on neurological function in mice cerebral ischemia model. The mouse model of cerebral ischemia was established by photochemistry and then assigned into sham operation group (photochemical building do not accept cold light
irradiation) and control group (10 ug/ml by intraperitoneal injection of saline solution), drug group (10 ug/ml by intraperitoneal injection of Astragaloside IV) followed by analysis of neurological severity, cerebral infarction area, loss of neurons, glial cell activation and the activities
of LC3, Beclin1, Caspase-3, P62 and mTOR by Western Blot. The neurons in cerebral infarction were missing and marginal area and penumbra appeared. The tissue in cerebral infarction became white, and the modeling was successful. The drug group showed significantly reduced scores and decreased
infarct area of brain tissue compared with control group on day 14, 21 and 28 (P < 0.05). TUNEL staining showed increased number of TUNEL cells at the ischemic edge in the drug group (0.35±0.07)% (P < 0.05), while the IBAL staining of (27.12±3.01)% and GFAP
staining of (0.08±0.02)% in the drug group showed significant inhibition of astrocytes (P < 0.05). The activity of LC3, Beclin1, Caspase-3 and P62 in drug group was inhibited, while the activity of mTOR was promoted. In conclusion, Astragaloside IV improves the balance ability
and the neural function of cerebral ischemia repair in mice model.
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Affiliation(s)
- Wei Zhang
- Department of Enesthesiology, Enshi Tujia and Miao Autonomous Prefecture Central Hospital, Enshi, Hubei, 445000, China
| | - Lun Ye
- Department of Emergency, Jiangjin Central Hospital of Chongqing, Chongqing, 402260, China
| | - Hairong Fang
- Department of Neurology (II) Ward, The First People’s Hospital of Jiangxia District, Wuhan, Hubei, 430000, China
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Luo Z, Chen Z, Liu M, Yang L, Zhao Z, Yang D, Ding P. Phenotypic, chemical component and molecular assessment of genetic diversity and population structure of Morinda officinalis germplasm. BMC Genomics 2022; 23:605. [PMID: 35986256 PMCID: PMC9392303 DOI: 10.1186/s12864-022-08817-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2022] [Accepted: 08/02/2022] [Indexed: 11/30/2022] Open
Abstract
Background Morinda officinalis How (MO) is a perennial herb distributed in tropical and subtropical regions, which known as one of the “Four Southern Herbal Medicines”. The extent of genetic variability and the population structure of MO are presently little understood. Here, nine morphological traits, six chemical components and Single nucleotide polymorphism (SNP) markers were used in integrative research of MO germplasm variation among 88 individuals collected from ten populations across four geographical provinces of China. Results Both phenotype and chemical composition have significant genetic variation, and there is a certain correlation between them such as root diameter and the nystose content, as well as geographical distribution. The principal component analysis (PCA) showed the leaf length, leaf width, nystose, 1F-furanosaccharide nystose, and the section color were the major contributors to diversity. The cluster analysis based on phenotypic and oligosaccharide data distinguished three significant groups, which was consistent with the result of a corresponding analysis with 228,615 SNP markers, and importantly, they all showed a significant correlation with geographical origin. However, there was little similarity between two cluster results. The Shannon’s information index (I) varied from 0.17 to 0.53 with a mean of 0.37, suggesting a high level of genetic diversity in MO populations, which mainly existed among individuals within populations, accounting for 99.66% of the total according to the analysis of molecular variance (AMOVA) results. Each population also maintains the connection because of certain gene communication, so that the genetic differentiation between populations was not very significant. The STRUCTURE software was used to analyse the population structure and the result showed that 88 accessions were clustered into three groups, and 67% of them were pure type, which was also confirmed through PCA. Conclusions The comprehensive study of phenotypic, chemical and molecular markers will provide valuable information for future breeding plans and understanding the phylogenetic relationship of MO population. Supplementary Information The online version contains supplementary material available at 10.1186/s12864-022-08817-w.
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Population Variability of Almond-Leaved Willow (Salix triandra L.) Based on the Leaf Morphometry: Isolation by Distance and Environment Explain Phenotypic Diversity. FORESTS 2022. [DOI: 10.3390/f13030420] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
Almond-leaved willow (Salix triandra L., Salicaceae) is a dioecious shrub, rarely a small tree that grows under various environmental conditions. We examined the population structure of 12 populations of almond-leaved willow using nine leaf morphological traits and specific leaf area. Populations were selected from a range of habitats, from continental to the sub-Mediterranean zone, to examine the influence of environmental conditions (climate and altitude) and geographic distance on leaf variability. Significant differences were confirmed among all populations for all traits, with significant correlations between geographic location of populations and morphological traits, and between environmental conditions and morphological traits. Large-leaved populations were found in continental and sub-Mediterranean climates, while small-leaved populations were found in higher elevations and smaller karstic rivers. In addition, populations from floodplains showed greater variability than populations from the karstic habitats, indicating a positive influence of lowland habitats and possible underlying differences in gene pool size. In conclusion, we found that environmental conditions and geographical distances in addition to genetic drift, are the main influences on the variability in almond-leaved willow, with the species showing a high level of plasticity and adaptation to local environmental conditions.
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Muniz AC, Pimenta RJG, Cruz MV, Rodrigues JG, Buzatti RSDO, Heuertz M, Lemos‐Filho JP, Lovato MB. Hybrid zone of a tree in a Cerrado/Atlantic Forest ecotone as a hotspot of genetic diversity and conservation. Ecol Evol 2022; 12:e8540. [PMID: 35127043 PMCID: PMC8803295 DOI: 10.1002/ece3.8540] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2021] [Accepted: 12/17/2021] [Indexed: 01/10/2023] Open
Abstract
The Cerrado, the largest Neotropical savanna, and the Brazilian Atlantic Forest form large ecotonal areas where savanna and forest habitats occupy adjacent patches with closely related species occurring side by side, providing opportunities for hybridization. Here, we investigated the evolutionary divergence between the savanna and forest ecotypes of the widely distributed tree Plathymenia reticulata (n = 233 individuals). Genetic structure analysis of P. reticulata was congruent with the recognition of two ecotypes, whose divergence captured the largest proportion of genetic variance in the data (F CT = 0.222 and F ST = 0.307). The ecotonal areas between the Cerrado and the Atlantic Forest constitute a hybrid zone in which a diversity of hybrid classes was observed, most of them corresponding to second-generation hybrids (F2) or backcrosses. Gene flow occurred mainly toward the forest ecotype. The genetic structure was congruent with isolation by environment, and environmental correlates of divergence were identified. The observed pattern of high genetic divergence between ecotypes may reflect an incipient speciation process in P. reticulata. The low genetic diversity of the P. reticulata forest ecotype indicate that it is threatened in areas with high habitat loss on Atlantic Forest. In addition, the high divergence from the savanna ecotype suggests it should be treated as a different unit of management. The high genetic diversity found in the ecotonal hybrid zone supports the view of ecotones as important areas for the origin and conservation of biodiversity in the Neotropics.
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Affiliation(s)
- André Carneiro Muniz
- Departamento de Genética, Ecologia e EvoluçãoUniversidade Federal de Minas GeraisBelo HorizonteBrazil
| | | | - Mariana Vargas Cruz
- Departamento de Genética, Ecologia e EvoluçãoUniversidade Federal de Minas GeraisBelo HorizonteBrazil
| | | | | | | | - José P. Lemos‐Filho
- Departamento de BotânicaUniversidade Federal de Minas GeraisBelo HorizonteBrazil
| | - Maria Bernadete Lovato
- Departamento de Genética, Ecologia e EvoluçãoUniversidade Federal de Minas GeraisBelo HorizonteBrazil
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Scalon MC, Rossatto DR, Oliveras I, Miatto RC, Gray EF, Domingos FMCB, Brum FT, Carlucci MB, Hoffmann WA, Marimon-Júnior BH, Marimon BS, Franco AC. Fire and drought: Shifts in bark investment across a broad geographical scale for Neotropical savanna trees. Basic Appl Ecol 2021. [DOI: 10.1016/j.baae.2021.06.011] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Souza ML, Garcia LE, Lovato MB, Lemos-Filho JP. Leaf trait variation during ontogeny in the endangered Brazilian rosewood tree. PLANT BIOLOGY (STUTTGART, GERMANY) 2021; 23:1109-1117. [PMID: 34532953 DOI: 10.1111/plb.13318] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/18/2021] [Accepted: 07/01/2021] [Indexed: 06/13/2023]
Abstract
Knowledge of plant responses to environmental heterogeneity during ontogeny is important to elucidate the changes that occur to promote resource capture in tropical forests. We tested the hypothesis that expression changes in leaf metamer traits of Brazilian rosewood (Dalbergia nigra), from seedlings to emergent canopy trees, occur as new microclimate environments are achieved. We also tested the hypothesis that increased light heterogeneity in the understorey leads to higher plasticity in leaf traits of seedlings and saplings than in sun-exposed metamers of emergent trees subject to stressful conditions. We compared leaf metamer traits of 53 individuals including seedlings, saplings and emergent trees. We also evaluated the light heterogeneity in vertical strata and the variations in leaf traits within individuals (among metamers of the same individual). These were associated with height of the individuals. Compared to understorey plants, emergent trees presented larger metamers, with lower specific leaf area (SLA), lower investment in leaf area per total dry mass of metamer (LARm ), lower specific petiole length (SPL) and lower specific internode length (SIL). Higher phenotypic variation within individuals was observed in seedlings, which decreased as the trees grew taller. The results suggest the integration of ontogenetic changes in leaf traits under new microclimate conditions as the plants reach different vertical strata in the forest. Additionally, our results support the hypothesis that increased light heterogeneity in the understorey shaped higher phenotypic variation within individuals in juveniles and that stressful conditions in sun-exposed leaf metamers of emergent trees led to increased phenotypic stability.
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Affiliation(s)
- M L Souza
- Departamento de Botânica, Universidade Federal de Minas Gerais, ICB-UFMG, Avenida Antonio Carlos, 6627, Belo Horizonte, Brasil, 31270-901, Brazil
- Instituto Federal de Educação, Ciência e Tecnologia do Ceará/Campus Acaraú, Acaraú, CEP, 62580-000, Brazil
| | - L E Garcia
- Departamento de Botânica, Universidade Federal de Minas Gerais, ICB-UFMG, Avenida Antonio Carlos, 6627, Belo Horizonte, Brasil, 31270-901, Brazil
| | - M B Lovato
- Departamento de Genética, Ecologia e Evolução, Universidade Federal de Minas Gerais/ICB, Avenida Antonio Carlos, 6627, Belo Horizonte, 31270-901, Brazil
| | - J P Lemos-Filho
- Departamento de Botânica, Universidade Federal de Minas Gerais, ICB-UFMG, Avenida Antonio Carlos, 6627, Belo Horizonte, Brasil, 31270-901, Brazil
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Lu Y, Ma Q, Chen C, Xu X, Zhang D. Effects of arbuscular mycorrhizal fungi on the nitrogen distribution in endangered Torreya jackii under nitrogen limitation. PLANTA 2021; 254:53. [PMID: 34402996 DOI: 10.1007/s00425-021-03704-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/20/2021] [Accepted: 08/10/2021] [Indexed: 06/13/2023]
Abstract
Arbuscular mycorrhizal fungi regulated the distribution of nitrogen in the leaves, thereby facilitating the adaptation of the endangered plant Torreya jackii to a low-nitrogen environment. Rhizophagus irregularis was inoculated into sterilized soil to investigate its impact on the distribution ratio of leaf nitrogen in cell wall proteins, cell membrane proteins, water-soluble proteins, and photosynthetic systems which includes the carboxylation system (PC), energy metabolism (PB), and light-harvesting system in the endangered species Torreya jackii. The results showed that R. irregularis reduced the specific leaf weight and the distribution ratio of nitrogen in cell wall proteins in the leaves of T. jackii, whereas it enhanced the distribution ratio of nitrogen in cell membrane proteins and water-soluble proteins. R. irregularis enabled more nitrogen uptake for growth by decreasing the distribution of nitrogen to the structural substances. At low-nitrogen levels, inoculation with R. irregularis improved the plant height (18.78 ~ 36.04%), shoot dry weight (50.53 ~ 64.33%), total dry weight (42.86 ~ 52.82%), maximal net photosynthetic rate (Pmax) (16.83 ~ 20.11%), photosynthetic nitrogen use efficiency (PNUE) (40.01 ~ 43.14%), PC (33.56 ~ 38.59%) and PB (29.08 ~ 34.02%). However, it did not substantially affect the leaf nitrogen content per unit area or the leaf nitrogen content per unit mass. Moreover, Pmax exhibited a significant positive correlation with PC and PB, and all three parameters showed a significant positive correlation with the PNUE, thereby revealing that R. irregularis increased the photosynthetic capacity and PNUE of T. jackii through boosting PC and PB.
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Affiliation(s)
- Yin Lu
- College of Biology and Environmental Engineering, Zhejiang Shuren University, Hangzhou, 310015, China.
| | - Qing Ma
- College of Biology and Environmental Engineering, Zhejiang Shuren University, Hangzhou, 310015, China
| | - Chuan Chen
- West Lake Scenic Spot Management Committee, Hangzhou, 310007, China
| | - Xiaolu Xu
- College of Biology and Environmental Engineering, Zhejiang Shuren University, Hangzhou, 310015, China
| | - Deyong Zhang
- College of Biology and Environmental Engineering, Zhejiang Shuren University, Hangzhou, 310015, China
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