Unraveling Genetic Diversity Amongst European Hazelnut (Corylus avellana L.) Varieties in Turkey

Can Pest Management and Cultivar Affect Phytoptus avellanae Infestations on Hazelnut?

The big bud mite Phytoptus avellanae is a resurgent pest of hazelnut, Corylus avellana, causing substantial yields reductions in many productive areas. Mites colonise and develop within healthy buds which become swollen, with subsequent alteration to the plant's development. To date, there has been limited knowledge on how the cultivar and pest management strategies affect infestations. This study explored these aspects through two ad hoc experiments carried out in central Italy. In the first experiment, the susceptibility of 11 cultivars with different geographic origins was tested in a germplasm hazelnut collection. The second experiment assessed the infestation level in orchards with integrated pest management (IPM) and organic pest management strategies and in a renaturalised environment (a former agricultural area now converted in a natural park). The results showed that the most and the least susceptible cultivars were Tonda Gentile and Nocchione, respectively. No significant differences were found between IPM and organic management, but they were both different to the renaturalised environment. The outcomes of this research can serve as a valuable reference and can be applied to all current or potential hazelnut cultivation areas characterised by the same environmental conditions.

Construction of a high-density genetic linkage map and QTL mapping for bioenergy-related traits in sweet sorghum [Sorghum bicolor (L.) Moench]

Sorghum is an important but arguably undervalued cereal crop, grown in large areas in Asia and Africa due to its natural resilience to drought and heat. There is growing demand for sweet sorghum as a source of bioethanol as well as food and feed. The improvement of bioenergy-related traits directly affects bioethanol production from sweet sorghum; therefore, understanding the genetic basis of these traits would enable new cultivars to be developed for bioenergy production. In order to reveal the genetic architecture behind bioenergy-related traits, we generated an F₂ population from a cross between sweet sorghum cv. 'Erdurmus' and grain sorghum cv. 'Ogretmenoglu'. This was used to construct a genetic map from SNPs discovered by double-digest restriction-site associated DNA sequencing (ddRAD-seq). F₃ lines derived from each F₂ individual were phenotyped for bioenergy-related traits in two different locations and their genotypes were analyzed with the SNPs to identify QTL regions. On chromosomes 1, 7, and 9, three major plant height (PH) QTLs (qPH1.1, qPH7.1, and qPH9.1) were identified, with phenotypic variation explained (PVE) ranging from 10.8 to 34.8%. One major QTL (qPJ6.1) on chromosome 6 was associated with the plant juice trait (PJ) and explained 35.2% of its phenotypic variation. For fresh biomass weight (FBW), four major QTLs (qFBW1.1, qFBW6.1, qFBW7.1, and qFBW9.1) were determined on chromosomes 1, 6, 7, and 9, which explained 12.3, 14.5, 10.6, and 11.9% of the phenotypic variation, respectively. Moreover, two minor QTLs (qBX3.1 and qBX7.1) of Brix (BX) were mapped on chromosomes 3 and 7, explaining 8.6 and 9.7% of the phenotypic variation, respectively. The QTLs in two clusters (qPH7.1/qBX7.1 and qPH7.1/qFBW7.1) overlapped for PH, FBW and BX. The QTL, qFBW6.1, has not been previously reported. In addition, eight SNPs were converted into cleaved amplified polymorphic sequences (CAPS) markers, which can be easily detected by agarose gel electrophoresis. These QTLs and molecular markers can be used for pyramiding and marker-assisted selection studies in sorghum, to develop advanced lines that include desirable bioenergy-related traits.

GRAS-Di SNP-based molecular characterization and fingerprinting of a Turkish Corylus avellana core set provide insights into the cultivation and breeding of hazelnut in Turkey

Hazelnut (Corylus avellana L.) is an economically and socially important product for Turkey, the country that leads global production of this crop. The preservation of Turkish hazelnut genetic diversity and informed breeding of new cultivars are crucial for maintaining quality and crop yield stability. In this study, genotyping by random amplicon sequencing (GRAS-Di) was used to identify single-nucleotide polymorphisms (SNPs) in a panel of 96 individuals representing the Turkish national hazelnut collection. The resulting 7609 high-quality SNPs were physically mapped to the Tombul cultivar reference genome and used for population structure and diversity analyses. These analyses revealed that cultivars are not less diverse than wild accessions and that 44% of the panel had admixed ancestry. The results also indicated that recently released Turkish cultivars are highly similar to each other, suggesting that diversity analysis is an important tool that should be employed to prevent future genetic bottlenecks in this crop. A minimal marker algorithm was used to select a set of seven SNP markers that were capable of differentiating the panel accessions. These fingerprinting markers should be useful for the propagation of true-to-type elite cultivars that can be used to renew Turkey's aging hazelnut orchards.

Diversity Assessment and DNA-Based Fingerprinting of Sicilian Hazelnut (Corylus avellana L.) Germplasm

The characterization of plant genetic resources is a precondition for genetic improvement and germplasm management. The increasing use of molecular markers for DNA-based genotype signature is crucial for variety identification and traceability in the food supply chain. We collected 75 Sicilian hazelnut accessions from private and public field collections, including widely grown varieties from the Nebrodi Mountains in north east Sicily (Italy). The germplasm was fingerprinted through nine standardized microsatellites (SSR) for hazelnut identification to evaluate the genetic diversity of the collected accessions, validating SSR discrimination power. We identified cases of homonymy and synonymy among acquisitions and the unique profiles. The genetic relationships illustrated by hierarchical clustering, structure, and discriminant analyses revealed a clear distinction between local and commercial varieties. The comparative genetic analysis also showed that the Nebrodi genotypes are significantly different from the Northern Italian, Iberian, and Turkish genotypes. These results highlight the need and urgency to preserve Nebrodi germplasm as a useful and valuable source for traits of interest employable for breeding. Our study demonstrates the usefulness of molecular marker analysis to select a reference germplasm collection of Sicilian hazelnut varieties and to implement certified plants' production in the supply chain.

Advances in Nursery Production of Hazelnut Plants in Serbia - Successful Grafting of Different Corylus avellana L. Cultivars and Clones Onto Corylus colurna L. Rootstock

The latest trends in hazelnut production are moving in the direction of selection and breeding of more productive cultivars, isolation of native clones, and more intensive clonal selection of rootstocks aimed at enhancing the agronomic performance of plants. Serbia stands out in the production of quality planting material by grafting on Turkish filbert (Corylus colurna L.), which does not form shoots and develops in the form of a tree. The aim of this research was to investigate the success achieved by grafting leading Italian cultivars (Tonda gentile romana, Tonda di Giffoni, and Tonda Gentile della Langhe) and their clones on Turkish filbert seedlings using technology developed at the University of Novi Sad, Faculty of Agriculture, Serbia, as well as determine possible differences in the quality and variability of the obtained planting material. For this purpose, from the end of March to the end of April, two-year-old C. colurna generative rootstocks (seedlings) were grafted by the whip and tongue method. At the beginning of September, the grafted plants were counted, and after the plants entered the dormant period (autumn in the year of grafting), they were taken out of the soil and classified. The obtained results revealed that the chosen hazel cultivars and clones exhibited excellent grafting success rate. In both analyzed years, as well as throughout the entire study period, greater grafting success was achieved using clones relative to the main cultivars. Over the two-year study period, the highest grafting success was achieved by clone AD17. Class I grafted plants were obtained in 80% of the cases, especially with Tombesi and AD17 clones, while significantly fewer Class I grafted plants were produced by grafting basic cultivars. Clones AD17 and Tombesi also produced grafted plants of greatest height and graft union diameter. All clones exhibited superior uniformity (i.e., a more stable grafting success) relative to their basic cultivars.