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Song W, Gao X, Li H, Li S, Wang J, Wang X, Wang T, Ye Y, Hu P, Li X, Fu B. Transcriptome analysis and physiological changes in the leaves of two Bromus inermis L. genotypes in response to salt stress. FRONTIERS IN PLANT SCIENCE 2023; 14:1313113. [PMID: 38162311 PMCID: PMC10755925 DOI: 10.3389/fpls.2023.1313113] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/10/2023] [Accepted: 11/24/2023] [Indexed: 01/03/2024]
Abstract
Soil salinity is a major factor threatening the production of crops around the world. Smooth bromegrass (Bromus inermis L.) is a high-quality grass in northern and northwestern China. Currently, selecting and utilizing salt-tolerant genotypes is an important way to mitigate the detrimental effects of salinity on crop productivity. In our research, salt-tolerant and salt-sensitive varieties were selected from 57 accessions based on a comprehensive evaluation of 22 relevant indexes, and their salt-tolerance physiological and molecular mechanisms were further analyzed. Results showed significant differences in salt tolerance between 57 genotypes, with Q25 and Q46 considered to be the most salt-tolerant and salt-sensitive accessions, respectively, compared to other varieties. Under saline conditions, the salt-tolerant genotype Q25 not only maintained significantly higher photosynthetic performance, leaf relative water content (RWC), and proline content but also exhibited obviously lower relative conductivity and malondialdehyde (MDA) content than the salt-sensitive Q46 (p < 0.05). The transcriptome sequencing indicated 15,128 differentially expressed genes (DEGs) in Q46, of which 7,885 were upregulated and 7,243 downregulated, and 12,658 DEGs in Q25, of which 6,059 were upregulated and 6,599 downregulated. The Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis showed that the salt response differences between Q25 and Q46 were attributed to the variable expression of genes associated with plant hormone signal transduction and MAPK signaling pathways. Furthermore, a large number of candidate genes, related to salt tolerance, were detected, which involved transcription factors (zinc finger proteins) and accumulation of compatible osmolytes (glutathione S-transferases and pyrroline-5-carboxylate reductases), etc. This study offers an important view of the physiological and molecular regulatory mechanisms of salt tolerance in two smooth bromegrass genotypes and lays the foundation for further identification of key genes linked to salt tolerance.
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Affiliation(s)
- Wenxue Song
- College of Forestry and Prataculture, Ningxia University, Yinchuan, Ningxia, China
| | - Xueqin Gao
- College of Forestry and Prataculture, Ningxia University, Yinchuan, Ningxia, China
- Ningxia Grassland and Animal Husbandry Engineering Technology Research Center, Yinchuan, Ningxia, China
| | - Huiping Li
- College of Forestry and Prataculture, Ningxia University, Yinchuan, Ningxia, China
| | - Shuxia Li
- College of Forestry and Prataculture, Ningxia University, Yinchuan, Ningxia, China
- Ningxia Grassland and Animal Husbandry Engineering Technology Research Center, Yinchuan, Ningxia, China
| | - Jing Wang
- College of Forestry and Prataculture, Ningxia University, Yinchuan, Ningxia, China
| | - Xing Wang
- College of Forestry and Prataculture, Ningxia University, Yinchuan, Ningxia, China
| | - Tongrui Wang
- College of Forestry and Prataculture, Ningxia University, Yinchuan, Ningxia, China
| | - Yunong Ye
- College of Forestry and Prataculture, Ningxia University, Yinchuan, Ningxia, China
| | - Pengfei Hu
- College of Forestry and Prataculture, Ningxia University, Yinchuan, Ningxia, China
| | - Xiaohong Li
- College of Forestry and Prataculture, Ningxia University, Yinchuan, Ningxia, China
| | - Bingzhe Fu
- College of Forestry and Prataculture, Ningxia University, Yinchuan, Ningxia, China
- Ningxia Grassland and Animal Husbandry Engineering Technology Research Center, Yinchuan, Ningxia, China
- Key Laboratory for Model Innovation in Forage Production Efficiency, Ministry of Agriculture and Rural Affairs, Yinchuan, Ningxia, China
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Mehari TG, Fang H, Feng W, Zhang Y, Umer MJ, Han J, Ditta A, Khan MKR, Liu F, Wang K, Wang B. Genome-wide identification and expression analysis of terpene synthases in Gossypium species in response to gossypol biosynthesis. Funct Integr Genomics 2023; 23:197. [PMID: 37270747 DOI: 10.1007/s10142-023-01125-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2023] [Revised: 05/26/2023] [Accepted: 05/26/2023] [Indexed: 06/05/2023]
Abstract
Cottonseed is an invaluable resource, providing protein, oil, and abundant minerals that significantly contribute to the well-being and nutritional needs of both humans and livestock. However, cottonseed also contains a toxic substance called gossypol, a secondary metabolite in Gossypium species that plays an important role in cotton plant development and self-protection. Herein, genome-wide analysis and characterization of the terpene synthase (TPS) gene family identified 304 TPS genes in Gossypium. Bioinformatics analysis revealed that the gene family was grouped into six subgroups TPS-a, TPS-b, TPS-c, TPS-e, TPS-f, and TPS-g. Whole-genome, segmental, and tandem duplication contributed to the evolution of TPS genes. According to the analysis of selection pressure, it was predicted that TPS genes experience predominantly negative selection, with positive selection occurring subsequently. RT-qPCR analysis in TM-1 and CRI-12 lines revealed GhTPS48 gene as the candidate gene for silencing experiments. To summarize, comprehensive genome-wide studies, RT-qPCR, and gene silencing experiments have collectively demonstrated the involvement of the TPS gene family in the biosynthesis of gossypol in cotton.
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Affiliation(s)
| | - Hui Fang
- School of Life Sciences, Nantong University, Nantong, Jiangsu, 226019, China
| | - Wenxiang Feng
- School of Life Sciences, Nantong University, Nantong, Jiangsu, 226019, China
| | - Yuanyuan Zhang
- State Key Laboratory of Cotton Biology, Institute of Cotton Research of Chinese Academy of Agricultural Sciences, Anyang, Henan, 455000, China
| | - Muhammad Jawad Umer
- State Key Laboratory of Cotton Biology, Institute of Cotton Research of Chinese Academy of Agricultural Sciences, Anyang, Henan, 455000, China
| | - Jinlei Han
- School of Life Sciences, Nantong University, Nantong, Jiangsu, 226019, China
| | - Allah Ditta
- Plant Breeding and Genetics Division, Nuclear Institute for Agriculture and Biology, Faisalabad, 38000, Pakistan
| | - Muhammad K R Khan
- Plant Breeding and Genetics Division, Nuclear Institute for Agriculture and Biology, Faisalabad, 38000, Pakistan
| | - Fang Liu
- State Key Laboratory of Cotton Biology, Institute of Cotton Research of Chinese Academy of Agricultural Sciences, Anyang, Henan, 455000, China.
| | - Kai Wang
- School of Life Sciences, Nantong University, Nantong, Jiangsu, 226019, China.
| | - Baohua Wang
- School of Life Sciences, Nantong University, Nantong, Jiangsu, 226019, China.
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