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Liu Z, Li Y, Shan S, Zhang M, Yang H, Cheng W, Wei X, Wang Y, Wu S. Regulatory roles of APS reductase in Citrobacter sp. XT1-2-2 as a response mechanism to cadmium immobilization in rice. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2024; 284:116892. [PMID: 39153279 DOI: 10.1016/j.ecoenv.2024.116892] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/08/2024] [Revised: 07/19/2024] [Accepted: 08/13/2024] [Indexed: 08/19/2024]
Abstract
Citrobacter sp. XT1-2-2, a functional microorganism with potential utilization, has the ability to immobilize soil cadmium. In this study, the regulatory gene cysH, as a rate-limiting enzyme in the sulfur metabolic pathway, was selected for functional analysis affecting cadmium immobilization in soil. To verify the effect of APS reductase on CdS formation, the ΔAPS and ΔAPS-com strains were constructed by conjugation transfer. Through TEM analysis, it was found that the adsorption of Cd2+ was affected by the absence of APS reductase in XT1-2-2 strain. The difference analysis of biofilm formation indicated that APS reductase was necessary for cell aggregation and biofilm formation. The p-XRD, XPS and FT-IR analysis revealed that APS reductase played an important role in the cadmium immobilization process of XT1-2-2 strain and promoting the formation of CdS. According to the pot experiments, the cadmium concentration of roots, culms, leaves and grains inoculated with ΔAPS strain was significantly higher than that of wild-type and ΔAPS-com strains, and the cadmium removal ability of ΔAPS strain was significantly lower than that of wild-type strain. The study provided insights into the exploration of new bacterial assisted technique for the remediation and safe production of rice in cadmium-contaminated paddy soils.
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Affiliation(s)
- Zhudong Liu
- Hunan Institute of Microbiology, Changsha, Hunan 410009, China
| | - Yilu Li
- Hunan Institute of Microbiology, Changsha, Hunan 410009, China
| | - Shiping Shan
- Hunan Institute of Microbiology, Changsha, Hunan 410009, China; Hunan Engineering and Technology Research Center of Agricultural Microbiology Application, Changsha, Hunan 410009, China.
| | - Min Zhang
- Hunan Institute of Microbiology, Changsha, Hunan 410009, China.
| | - Hua Yang
- Hunan Institute of Microbiology, Changsha, Hunan 410009, China.
| | - Wei Cheng
- Hunan Institute of Microbiology, Changsha, Hunan 410009, China
| | - Xiaowu Wei
- Hunan Institute of Microbiology, Changsha, Hunan 410009, China
| | - Yushuang Wang
- Hunan Institute of Microbiology, Changsha, Hunan 410009, China
| | - Shandong Wu
- Hunan Institute of Microbiology, Changsha, Hunan 410009, China
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Liu S, Li H, Zhu Z, Wu M, Jin M, Wang X, Hou J, Li D, Wang R. A bacteriophage against Citrobacter braakii and its synergistic effect with antibiotics. Arch Microbiol 2024; 206:74. [PMID: 38253939 DOI: 10.1007/s00203-023-03803-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2023] [Revised: 12/06/2023] [Accepted: 12/17/2023] [Indexed: 01/24/2024]
Abstract
A bacteriophage BD49 specific for Citrobacter braakii was screened out and purified by double-layer plate method. It consists of a polyhedral head of 93.1 ± 1.2 nm long and 72.9 ± 4.2 nm wide, tail fibers, collar, sheath and baseplate. The bacteriophage was identified by morphology observed with transmission electron microscope (TEM), whole genome sequencing carried out by Illumina next generation sequencing (NGS) technique, and gene annotation based on Clusters of Orthologous Groups of proteins (COG) database. It was identified primarily as a member of Caudovirales by morphology and further determined as Caudovirales, Myoviridae, and Citrobacter bacteriophage by alignment of its whole genome sequence with the NCBI database and establishment of phylogenetic tree. The bacteriophage showed good environmental suitability with optimal multiplicity of infection (MOI) of 0.01, proliferation time of 80 min, optimum living temperature of 30-40 °C, and living pH of 5-10. In addition, it exhibited synergistic effect with ciprofloxacin against C. braakii in antibacterial tests.
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Affiliation(s)
- Siqi Liu
- School of Life Sciences, Beijing University of Chinese Medicine, Liangxiang University Town, Yangguang South Street, Fangshan District, Beijing, 102488, China
| | - Hanyi Li
- School of Life Sciences, Beijing University of Chinese Medicine, Liangxiang University Town, Yangguang South Street, Fangshan District, Beijing, 102488, China
| | - Zhihao Zhu
- School of Life Sciences, Beijing University of Chinese Medicine, Liangxiang University Town, Yangguang South Street, Fangshan District, Beijing, 102488, China
| | - Mengjiao Wu
- School of Life Sciences, Beijing University of Chinese Medicine, Liangxiang University Town, Yangguang South Street, Fangshan District, Beijing, 102488, China
| | - Mingxuan Jin
- School of Life Sciences, Beijing University of Chinese Medicine, Liangxiang University Town, Yangguang South Street, Fangshan District, Beijing, 102488, China
| | - Xiangxiang Wang
- School of Life Sciences, Beijing University of Chinese Medicine, Liangxiang University Town, Yangguang South Street, Fangshan District, Beijing, 102488, China
| | - Jincai Hou
- Hebei Shineway Pharmaceutical Co., Ltd, Yingbin Street, Langfang, 065201, Hebei, China.
| | - Dan Li
- Hebei Shineway Pharmaceutical Co., Ltd, Yingbin Street, Langfang, 065201, Hebei, China.
| | - Rufeng Wang
- School of Life Sciences, Beijing University of Chinese Medicine, Liangxiang University Town, Yangguang South Street, Fangshan District, Beijing, 102488, China.
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