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Rodrigues Reis CE, Milessi TS, Ramos MDN, Singh AK, Mohanakrishna G, Aminabhavi TM, Kumar PS, Chandel AK. Lignocellulosic biomass-based glycoconjugates for diverse biotechnological applications. Biotechnol Adv 2023; 68:108209. [PMID: 37467868 DOI: 10.1016/j.biotechadv.2023.108209] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2023] [Revised: 06/05/2023] [Accepted: 07/01/2023] [Indexed: 07/21/2023]
Abstract
Glycoconjugates are the ubiquitous components of mammalian cells, mainly synthesized by covalent bonds of carbohydrates to other biomolecules such as proteins and lipids, with a wide range of potential applications in novel vaccines, therapeutic peptides and antibodies (Ab). Considering the emerging developments in glycoscience, renewable production of glycoconjugates is of importance and lignocellulosic biomass (LCB) is a potential source of carbohydrates to produce synthetic glycoconjugates in a sustainable pathway. In this review, recent advances in glycobiology aiming on glycoconjugates production is presented together with the recent and cutting-edge advances in the therapeutic properties and application of glycoconjugates, including therapeutic glycoproteins, glycosaminoglycans (GAGs), and nutraceuticals, emphasizing the integral role of glycosylation in their function and efficacy. Special emphasis is given towards the potential exploration of carbon neutral feedstocks, in which LCB has an emerging role. Techniques for extraction and recovery of mono- and oligosaccharides from LCB are critically discussed and influence of the heterogeneous nature of the feedstocks and different methods for recovery of these sugars in the development of the customized glycoconjugates is explored. Although reports on the use of LCB for the production of glycoconjugates are scarce, this review sets clear that the potential of LCB as a source for the production of valuable glycoconjugates cannot be underestimated and encourages that future research should focus on refining the existing methodologies and exploring new approaches to fully realize the potential of LCB in glycoconjugate production.
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Affiliation(s)
| | - Thais Suzane Milessi
- Department of Chemical Engineering, Federal University of São Carlos, Rodovia Washington Luís, km 235, 13565-905 São Carlos, SP, Brazil; Graduate Program of Chemical Engineering, Federal University of São Carlos (PPGEQ-UFSCar), Rodovia Washington Luís, km 235, 13565-905 São Carlos, SP, Brazil
| | - Márcio Daniel Nicodemos Ramos
- Department of Chemical Engineering, Federal University of São Carlos, Rodovia Washington Luís, km 235, 13565-905 São Carlos, SP, Brazil
| | - Akhilesh Kumar Singh
- Department of Biotechnology, School of Life Sciences, Mahatma Gandhi Central University, Motihari 845401, Bihar, India
| | - Gunda Mohanakrishna
- Center for Energy and Environment, School of Advanced Sciences, KLE Technological University, Hubballi 580 031, India
| | - Tejraj M Aminabhavi
- Center for Energy and Environment, School of Advanced Sciences, KLE Technological University, Hubballi 580 031, India.
| | - P Senthil Kumar
- Department of Chemical Engineering, Sri Sivasubramaniya Nadar College of Engineering, Kalavakkam 603110, Tamil Nadu, India; Centre of Excellence in Water Research (CEWAR), Sri Sivasubramaniya Nadar College of Engineering, Kalavakkam 603110, Tamil Nadu, India; School of Engineering, Lebanese American University, Byblos, Lebanon
| | - Anuj K Chandel
- Department of Biotechnology, Engineering School of Lorena, University of São Paulo, Lorena, São Paulo 12602-810, Brazil.
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Papaioannou EH, Bazzarelli F, Mazzei R, Giannakopoulos V, Roberts MR, Giorno L. Membrane Cascade Fractionation of Tomato Leaf Extracts-Towards Bio-Based Crop Protection. MEMBRANES 2023; 13:855. [PMID: 37999341 PMCID: PMC10673455 DOI: 10.3390/membranes13110855] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/28/2023] [Revised: 10/21/2023] [Accepted: 10/23/2023] [Indexed: 11/25/2023]
Abstract
Promising initial results from the use of membrane-fractionated extracts of tomato leaf as crop protection agents have recently been reported. This paper provides additional evidence from larger scale experiments that identify an efficient pipeline for the separation of tomato leaf extracts to generate a fraction with significant defence elicitor activity. A UF tubular membrane 150 kDa, with an internal diameter of 5 mm, proved appropriate for initial extract clarification, whereas afterwards a UF 10 kDa and three NF membranes (200-800 Da) in sequence were evaluated for the subsequent fractionation of this tomato extract. The compositions of sugars, proteins and total biophenols were changed in these fractions with respect to the initial extract. The initial extract ratio of sugars: proteins: biophenols was 1:0.047:0.052, whereas for the retentate of the 800 Da NF membrane, which has the higher crop protection activity, this ratio was 1:0.06:0.1. In this regard, it appears that the main crop protection effect in this fraction was due to the sugars isolated. It was found that with the appropriate membrane cascade selection (UF 150 kDa, UF 10 kDa and NF 800 Da) it was possible to produce (easily and without the need of additional chemicals) a fraction that has significant activity as an elicitor of disease resistance in tomato, whereas the remaining fractions could be used for other purposes in a biorefinery. This is very promising for the wider application of the proposed approach for the relatively easy formulation of bio-based aqueous streams with bio-pesticide activities.
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Affiliation(s)
| | - Fabio Bazzarelli
- National Research Council of Italy, Institute on Membrane Technology, CNR-ITM, Via P. Bucci, 87036 Rende, Italy (L.G.)
| | - Rosalinda Mazzei
- National Research Council of Italy, Institute on Membrane Technology, CNR-ITM, Via P. Bucci, 87036 Rende, Italy (L.G.)
| | | | - Michael R. Roberts
- Lancaster Environment Centre, Lancaster University, Lancaster LA1 4YQ, UK
| | - Lidietta Giorno
- National Research Council of Italy, Institute on Membrane Technology, CNR-ITM, Via P. Bucci, 87036 Rende, Italy (L.G.)
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Aitouguinane M, El Alaoui-Talibi Z, Rchid H, Fendri I, Abdelkafi S, El-Hadj MDO, Boual Z, Le Cerf D, Rihouey C, Gardarin C, Dubessay P, Michaud P, Pierre G, Delattre C, El Modafar C. Elicitor Activity of Low-Molecular-Weight Alginates Obtained by Oxidative Degradation of Alginates Extracted from Sargassum muticum and Cystoseira myriophylloides. Mar Drugs 2023; 21:301. [PMID: 37233495 PMCID: PMC10222107 DOI: 10.3390/md21050301] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2023] [Revised: 05/04/2023] [Accepted: 05/12/2023] [Indexed: 05/27/2023] Open
Abstract
Alginates extracted from two Moroccan brown seaweeds and their derivatives were investigated for their ability to induce phenolic metabolism in the roots and leaves of tomato seedlings. Sodium alginates (ALSM and ALCM) were extracted from the brown seaweeds Sargassum muticum and Cystoseira myriophylloides, respectively. Low-molecular-weight alginates (OASM and OACM) were obtained after radical hydrolysis of the native alginates. Elicitation was carried out by foliar spraying 20 mL of aqueous solutions (1 g/L) on 45-day-old tomato seedlings. Elicitor capacities were evaluated by monitoring phenylalanine ammonia-lyase (PAL) activity, polyphenols, and lignin production in the roots and leaves after 0, 12, 24, 48, and 72 h of treatment. The molecular weights (Mw) of the different fractions were 202 kDa for ALSM, 76 kDa for ALCM, 19 kDa for OACM, and 3 kDa for OASM. FTIR analysis revealed that the structures of OACM and OASM did not change after oxidative degradation of the native alginates. These molecules showed their differential capacity to induce natural defenses in tomato seedlings by increasing PAL activity and through the accumulation of polyphenol and lignin content in the leaves and roots. The oxidative alginates (OASM and OACM) exhibited an effective induction of the key enzyme of phenolic metabolism (PAL) compared to the alginate polymers (ALSM and ALCM). These results suggest that low-molecular-weight alginates may be good candidates for stimulating the natural defenses of plants.
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Affiliation(s)
- Meriem Aitouguinane
- Centre d’Agrobiotechnologie et Bioingénierie, Unité de Recherche Labellisée CNRST (Centre AgroBiotech, URL-CNRST 05), Faculté des Sciences et Techniques, Université Cadi Ayyad, Marrakech 40000, Morocco; (M.A.); (C.E.M.)
- Clermont Auvergne INP, CNRS, Institut Pascal, Université Clermont Auvergne, F-63000 Clermont-Ferrand, France; (C.G.); (P.D.); (P.M.)
| | - Zainab El Alaoui-Talibi
- Centre d’Agrobiotechnologie et Bioingénierie, Unité de Recherche Labellisée CNRST (Centre AgroBiotech, URL-CNRST 05), Faculté des Sciences et Techniques, Université Cadi Ayyad, Marrakech 40000, Morocco; (M.A.); (C.E.M.)
| | - Halima Rchid
- Laboratoire de Biotechnologies et Valorisation des Ressources Végétales, Faculté des Sciences, Université Chouaib Doukkali, El Jadida 24000, Morocco;
| | - Imen Fendri
- Laboratoire de Biotechnologie des Plantes Appliquée à l’Amélioration des Cultures, Faculté des Sciences de Sfax, Université de Sfax, Sfax 3000, Tunisia;
| | - Slim Abdelkafi
- Laboratoire de Génie Enzymatique et de Microbiologie, Equipe de Biotechnologie des Algues, Ecole Nationale d’Ingénieurs de Sfax, Université de Sfax, Sfax 3000, Tunisia;
| | - Mohamed Didi Ould El-Hadj
- Laboratoire de Protection des Ecosystèmes en Zones Arides et Semi-Arides, Faculté des Sciences de la Nature et de la vie BP 511, Université Kasdi Merbah de Ouargla, Ouargla 30000, Algeria; (M.D.O.E.-H.); (Z.B.)
| | - Zakaria Boual
- Laboratoire de Protection des Ecosystèmes en Zones Arides et Semi-Arides, Faculté des Sciences de la Nature et de la vie BP 511, Université Kasdi Merbah de Ouargla, Ouargla 30000, Algeria; (M.D.O.E.-H.); (Z.B.)
| | - Didier Le Cerf
- Polymères Biopolymères Surfaces, Normandie Université, UNIROUEN, INSA Rouen, CNRS, UMR6270, F-76821 Mont Saint-Aignan, France; (D.L.C.); (C.R.)
| | - Christophe Rihouey
- Polymères Biopolymères Surfaces, Normandie Université, UNIROUEN, INSA Rouen, CNRS, UMR6270, F-76821 Mont Saint-Aignan, France; (D.L.C.); (C.R.)
| | - Christine Gardarin
- Clermont Auvergne INP, CNRS, Institut Pascal, Université Clermont Auvergne, F-63000 Clermont-Ferrand, France; (C.G.); (P.D.); (P.M.)
| | - Pascal Dubessay
- Clermont Auvergne INP, CNRS, Institut Pascal, Université Clermont Auvergne, F-63000 Clermont-Ferrand, France; (C.G.); (P.D.); (P.M.)
| | - Philippe Michaud
- Clermont Auvergne INP, CNRS, Institut Pascal, Université Clermont Auvergne, F-63000 Clermont-Ferrand, France; (C.G.); (P.D.); (P.M.)
| | - Guillaume Pierre
- Clermont Auvergne INP, CNRS, Institut Pascal, Université Clermont Auvergne, F-63000 Clermont-Ferrand, France; (C.G.); (P.D.); (P.M.)
| | - Cédric Delattre
- Clermont Auvergne INP, CNRS, Institut Pascal, Université Clermont Auvergne, F-63000 Clermont-Ferrand, France; (C.G.); (P.D.); (P.M.)
- Institut Universitaire de France (IUF), 1 Rue Descartes, F-75005 Paris, France
| | - Cherkaoui El Modafar
- Centre d’Agrobiotechnologie et Bioingénierie, Unité de Recherche Labellisée CNRST (Centre AgroBiotech, URL-CNRST 05), Faculté des Sciences et Techniques, Université Cadi Ayyad, Marrakech 40000, Morocco; (M.A.); (C.E.M.)
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Arif MAR, Tripodi P, Waheed MQ, Afzal I, Pistrick S, Schütze G, Börner A. Genetic Analyses of Seed Longevity in Capsicum annuum L. in Cold Storage Conditions. PLANTS (BASEL, SWITZERLAND) 2023; 12:1321. [PMID: 36987009 PMCID: PMC10057624 DOI: 10.3390/plants12061321] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/26/2023] [Revised: 03/06/2023] [Accepted: 03/13/2023] [Indexed: 06/19/2023]
Abstract
Seed longevity is the most important trait in the genebank management system. No seed can remain infinitely viable. There are 1241 accessions of Capsicum annuum L. available at the German Federal ex situ genebank at IPK Gatersleben. C. annuum (Capsicum) is the most economically important species of the genus Capsicum. So far, there is no report that has addressed the genetic basis of seed longevity in Capsicum. Here, we convened a total of 1152 Capsicum accessions that were deposited in Gatersleben over forty years (from 1976 to 2017) and assessed their longevity by analyzing the standard germination percentage after 5-40 years of storage at -15/-18 °C. These data were used to determine the genetic causes of seed longevity, along with 23,462 single nucleotide polymorphism (SNP) markers covering all of the 12 Capsicum chromosomes. Using the association-mapping approach, we identified a total of 224 marker trait associations (MTAs) (34, 25, 31, 35, 39, 7, 21 and 32 MTAs after 5-, 10-, 15-, 20-, 25-, 30-, 35- and 40-year storage intervals) on all the Capsicum chromosomes. Several candidate genes were identified using the blast analysis of SNPs, and these candidate genes are discussed.
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Affiliation(s)
| | - Pasquale Tripodi
- Research Centre for Vegetable and Ornamental Crops, Council for Agricultural Research and Economics (CREA), 84098 Pontecagnano Faiano, Italy
| | | | - Irfan Afzal
- Seed Physiology Lab, Department of Agronomy, University of Agriculture, Faisalabad 38000, Pakistan
| | - Sibylle Pistrick
- Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstr. 3, 06466 Seeland, Germany
| | - Gudrun Schütze
- Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstr. 3, 06466 Seeland, Germany
| | - Andreas Börner
- Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstr. 3, 06466 Seeland, Germany
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Fungi That Promote Plant Growth in the Rhizosphere Boost Crop Growth. J Fungi (Basel) 2023; 9:jof9020239. [PMID: 36836352 PMCID: PMC9966197 DOI: 10.3390/jof9020239] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2023] [Revised: 02/05/2023] [Accepted: 02/07/2023] [Indexed: 02/15/2023] Open
Abstract
The fungi species dwelling in the rhizosphere of crop plants, revealing functions that endeavor sustainability of the plants, are commonly referred to as 'plant-growth-promoting fungi' (PGPF). They are biotic inducers that provide benefits and carry out important functions in agricultural sustainability. The problem encountered in the agricultural system nowadays is how to meet population demand based on crop yield and protection without putting the environment and human and animal health at risk based on crop production. PGPF including Trichoderma spp., Gliocladium virens, Penicillium digitatum, Aspergillus flavus, Actinomucor elegans, Podospora bulbillosa, Arbuscular mycorrhizal fungi, etc., have proven their ecofriendly nature to ameliorate the production of crops by improving the growth of the shoots and roots of crop plants, the germination of seeds, the production of chlorophyll for photosynthesis, and the abundant production of crops. PGPF's potential mode of action is as follows: the mineralization of the major and minor elements required to support plants' growth and productivity. In addition, PGPF produce phytohormones, induced resistance, and defense-related enzymes to inhibit or eradicate the invasion of pathogenic microbes, in other words, to help the plants while encountering stress. This review portrays the potential of PGPF as an effective bioagent to facilitate and promote crop production, plant growth, resistance to disease invasion, and various abiotic stresses.
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Figueroa FA, Abdala-Díaz RT, Pérez C, Casas-Arrojo V, Nesic A, Tapia C, Durán C, Valdes O, Parra C, Bravo-Arrepol G, Soto L, Becerra J, Cabrera-Barjas G. Sulfated Polysaccharide Extracted from the Green Algae Codium bernabei: Physicochemical Characterization and Antioxidant, Anticoagulant and Antitumor Activity. Mar Drugs 2022; 20:md20070458. [PMID: 35877751 PMCID: PMC9317217 DOI: 10.3390/md20070458] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2022] [Revised: 07/11/2022] [Accepted: 07/13/2022] [Indexed: 01/27/2023] Open
Abstract
Codium bernabei is a green alga that grows on Chilean coasts. The composition of its structural polysaccharides is still unknown. Hence, the aim of this work is to isolate and characterize the hot water extracted polysaccharide fractions. For this purpose, the water extracts were further precipitated in alcohol (TPs) and acid media (APs), respectively. Both fractions were characterized using different physicochemical techniques such as GC-MS, GPC, FTIR, TGA, and SEM. It is confirmed that the extracted fractions are mainly made of sulfated galactan unit, with a degree of sulfation of 19.3% (TPs) and 17.4% (ATs) and a protein content of 3.5% in APs and 15.6% in TPs. Other neutral sugars such as xylose, glucose, galactose, fucose, mannose, and arabinose were found in a molar ratio (0.05:0.6:1.0:0.02:0.14:0.11) for TPs and (0.05:0.31:1.0:0.03:0.1:0.13) for ATs. The molecular weight of the polysaccharide samples was lower than 20 kDa. Both polysaccharides were thermally stable (Tonset > 190 °C) and showed antioxidant activity according to the ABTS•+ and DPPH tests, where TPs fractions had higher scavenging activity (35%) compared to the APs fractions. The PT and APTTS assays were used to measure the anticoagulant activity of the polysaccharide fractions. In general, the PT activity of the TPs and APs was not different from normal plasma values. The exception was the TPs treatment at 1000 µg mL−1 concentration. The APTTS test revealed that clotting time for both polysaccharides was prolonged regarding normal values at 1000 µg mL−1. Finally, the antitumor test in colorectal carcinoma (HTC-116) cell line, breast cancer (MCF-7) and human leukemia (HL-60) cell lines showed the cytotoxic effect of TPs and APs. Those results suggest the potential biotechnological application of sulfate galactan polysaccharides isolated from a Chilean marine resource.
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Affiliation(s)
- Fabian A. Figueroa
- Laboratorio de Química de Productos Naturales, Departamento de Botánica, Facultad de Ciencias Naturales y Oceanográficas, Universidad de Concepción, Casilla 160-C, Concepción 4030000, Chile; (F.A.F.); (C.P.); (A.N.); (L.S.); (J.B.)
- Unidad de Desarrollo Tecnológico (UDT), Universidad de Concepción, Avda. Cordillera No. 2634, Parque Industrial Coronel, Coronel 4191996, Chile;
| | - Roberto T. Abdala-Díaz
- Departamento de Ecología, Facultad de Ciencias, Instituto de Biotecnología y Desarrollo Azul (IBYDA), Universidad de Málaga, Campus de Teatinos s/n, 29071 Málaga, Spain;
- Correspondence: (R.T.A.-D.); (G.C.-B.)
| | - Claudia Pérez
- Laboratorio de Química de Productos Naturales, Departamento de Botánica, Facultad de Ciencias Naturales y Oceanográficas, Universidad de Concepción, Casilla 160-C, Concepción 4030000, Chile; (F.A.F.); (C.P.); (A.N.); (L.S.); (J.B.)
- Unidad de Desarrollo Tecnológico (UDT), Universidad de Concepción, Avda. Cordillera No. 2634, Parque Industrial Coronel, Coronel 4191996, Chile;
| | - Virginia Casas-Arrojo
- Departamento de Ecología, Facultad de Ciencias, Instituto de Biotecnología y Desarrollo Azul (IBYDA), Universidad de Málaga, Campus de Teatinos s/n, 29071 Málaga, Spain;
| | - Aleksandra Nesic
- Laboratorio de Química de Productos Naturales, Departamento de Botánica, Facultad de Ciencias Naturales y Oceanográficas, Universidad de Concepción, Casilla 160-C, Concepción 4030000, Chile; (F.A.F.); (C.P.); (A.N.); (L.S.); (J.B.)
- Vinca Institute of Nuclear Sciences—National Institute of the Republic of Serbia, University of Belgrade, 12–14 Mike Petrovića Street, 11000 Belgrade, Serbia
| | - Cecilia Tapia
- Laboratorio de Especialidad Clínica Dávila-OMESA, Recoleta 464, Recoleta, Santiago 8431657, Chile; (C.T.); (C.D.)
| | - Carla Durán
- Laboratorio de Especialidad Clínica Dávila-OMESA, Recoleta 464, Recoleta, Santiago 8431657, Chile; (C.T.); (C.D.)
| | - Oscar Valdes
- Centro de Investigación de Estudios Avanzados del Maule (CIEAM), Vicerrectoría de Investigación y Postgrado, Universidad Católica del Maule, Talca 3480005, Chile;
| | - Carolina Parra
- Laboratorio de Recursos Renovables, Centro de Biotecnología, Barrio Universitario s/n, Universidad de Concepción, Concepción 4030000, Chile;
| | - Gastón Bravo-Arrepol
- Unidad de Desarrollo Tecnológico (UDT), Universidad de Concepción, Avda. Cordillera No. 2634, Parque Industrial Coronel, Coronel 4191996, Chile;
| | - Luis Soto
- Laboratorio de Química de Productos Naturales, Departamento de Botánica, Facultad de Ciencias Naturales y Oceanográficas, Universidad de Concepción, Casilla 160-C, Concepción 4030000, Chile; (F.A.F.); (C.P.); (A.N.); (L.S.); (J.B.)
| | - José Becerra
- Laboratorio de Química de Productos Naturales, Departamento de Botánica, Facultad de Ciencias Naturales y Oceanográficas, Universidad de Concepción, Casilla 160-C, Concepción 4030000, Chile; (F.A.F.); (C.P.); (A.N.); (L.S.); (J.B.)
- Unidad de Desarrollo Tecnológico (UDT), Universidad de Concepción, Avda. Cordillera No. 2634, Parque Industrial Coronel, Coronel 4191996, Chile;
| | - Gustavo Cabrera-Barjas
- Unidad de Desarrollo Tecnológico (UDT), Universidad de Concepción, Avda. Cordillera No. 2634, Parque Industrial Coronel, Coronel 4191996, Chile;
- Centro Nacional de Excelencia Para la Industria de la Madera (CENAMAD), Pontificia Universidad Católica de Chile, Vicuña Mackenna 4860, Santiago 7820436, Chile
- Centro de Investigación de Polímeros Avanzados, Edificio Laboratorio (CIPA), Avda. Collao 1202, Concepción 4051381, Chile
- Correspondence: (R.T.A.-D.); (G.C.-B.)
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