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Wang Y, Fu Y, Luo X. Identification of Pathogenetic Brain Regions via Neuroimaging Data for Diagnosis of Autism Spectrum Disorders. Front Neurosci 2022; 16:900330. [PMID: 35655751 PMCID: PMC9152096 DOI: 10.3389/fnins.2022.900330] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2022] [Accepted: 04/11/2022] [Indexed: 11/13/2022] Open
Abstract
Autism spectrum disorder (ASD) is a kind of neurodevelopmental disorder that often occurs in children and has a hidden onset. Patients usually have lagged development of communication ability and social behavior and thus suffer an unhealthy physical and mental state. Evidence has indicated that diseases related to ASD have commonalities in brain imaging characteristics. This study aims to study the pathogenesis of ASD based on brain imaging data to locate the ASD-related brain regions. Specifically, we collected the functional magnetic resonance image data of 479 patients with ASD and 478 normal subjects matched in age and gender and used a machine-learning framework named random support vector machine cluster to extract distinctive brain regions from the preprocessed data. According to the experimental results, compared with other existing approaches, the method used in this study can more accurately distinguish patients from normal individuals based on brain imaging data. At the same time, this study found that the development of ASD was highly correlated with certain brain regions, e.g., lingual gyrus, superior frontal gyrus, medial gyrus, insular lobe, and olfactory cortex. This study explores the effectiveness of a novel machine-learning approach in the study of ASD brain imaging and provides a reference brain area for the medical research and clinical treatment of ASD.
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Affiliation(s)
- Yu Wang
- Hunan Provincial Key Laboratory of Intelligent Computing and Language Information Processing, Hunan Normal University, Changsha, China
- College of Information Science and Engineering, Hunan Normal University, Changsha, China
- Hunan Xiangjiang Artificial Intelligence Academy, Changsha, China
| | - Yu Fu
- Hunan Provincial Key Laboratory of Intelligent Computing and Language Information Processing, Hunan Normal University, Changsha, China
- College of Information Science and Engineering, Hunan Normal University, Changsha, China
- Hunan Xiangjiang Artificial Intelligence Academy, Changsha, China
- *Correspondence: Yu Fu
| | - Xun Luo
- Hunan Provincial Key Laboratory of Intelligent Computing and Language Information Processing, Hunan Normal University, Changsha, China
- College of Information Science and Engineering, Hunan Normal University, Changsha, China
- Hunan Xiangjiang Artificial Intelligence Academy, Changsha, China
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Javeed A, Khan SU, Ali L, Ali S, Imrana Y, Rahman A. Machine Learning-Based Automated Diagnostic Systems Developed for Heart Failure Prediction Using Different Types of Data Modalities: A Systematic Review and Future Directions. COMPUTATIONAL AND MATHEMATICAL METHODS IN MEDICINE 2022; 2022:9288452. [PMID: 35154361 PMCID: PMC8831075 DOI: 10.1155/2022/9288452] [Citation(s) in RCA: 16] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/22/2021] [Accepted: 01/15/2022] [Indexed: 12/13/2022]
Abstract
One of the leading causes of deaths around the globe is heart disease. Heart is an organ that is responsible for the supply of blood to each part of the body. Coronary artery disease (CAD) and chronic heart failure (CHF) often lead to heart attack. Traditional medical procedures (angiography) for the diagnosis of heart disease have higher cost as well as serious health concerns. Therefore, researchers have developed various automated diagnostic systems based on machine learning (ML) and data mining techniques. ML-based automated diagnostic systems provide an affordable, efficient, and reliable solutions for heart disease detection. Various ML, data mining methods, and data modalities have been utilized in the past. Many previous review papers have presented systematic reviews based on one type of data modality. This study, therefore, targets systematic review of automated diagnosis for heart disease prediction based on different types of modalities, i.e., clinical feature-based data modality, images, and ECG. Moreover, this paper critically evaluates the previous methods and presents the limitations in these methods. Finally, the article provides some future research directions in the domain of automated heart disease detection based on machine learning and multiple of data modalities.
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Affiliation(s)
- Ashir Javeed
- Aging Research Center, Karolinska Institutet, Sweden
| | - Shafqat Ullah Khan
- Department of Electrical Engineering, University of Science and Technology Bannu, Pakistan
| | - Liaqat Ali
- Department of Electronics, University of Buner, Buner, Pakistan
| | - Sardar Ali
- School of Engineering and Applied Sciences, Isra University Islamabad Campus, Pakistan
| | - Yakubu Imrana
- School of Engineering, University of Development Studies, Tamale, Ghana
- School of Computer Science and Engineering, University of Electronic Science and Technology of China (UESTC), Chengdu, China
| | - Atiqur Rahman
- Department of Computer Science, University of Science and Technology Bannu, Pakistan
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Alamgir A, Mousa O, Shah Z. Artificial Intelligence in Predicting Cardiac Arrest: Scoping Review. JMIR Med Inform 2021; 9:e30798. [PMID: 34927595 PMCID: PMC8726033 DOI: 10.2196/30798] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2021] [Revised: 10/07/2021] [Accepted: 10/10/2021] [Indexed: 02/01/2023] Open
Abstract
BACKGROUND Cardiac arrest is a life-threatening cessation of activity in the heart. Early prediction of cardiac arrest is important, as it allows for the necessary measures to be taken to prevent or intervene during the onset. Artificial intelligence (AI) technologies and big data have been increasingly used to enhance the ability to predict and prepare for the patients at risk. OBJECTIVE This study aims to explore the use of AI technology in predicting cardiac arrest as reported in the literature. METHODS A scoping review was conducted in line with the guidelines of the PRISMA (Preferred Reporting Items for Systematic Reviews and Meta-Analyses) extension for scoping reviews. Scopus, ScienceDirect, Embase, the Institute of Electrical and Electronics Engineers, and Google Scholar were searched to identify relevant studies. Backward reference list checks of the included studies were also conducted. Study selection and data extraction were independently conducted by 2 reviewers. Data extracted from the included studies were synthesized narratively. RESULTS Out of 697 citations retrieved, 41 studies were included in the review, and 6 were added after backward citation checking. The included studies reported the use of AI in the prediction of cardiac arrest. Of the 47 studies, we were able to classify the approaches taken by the studies into 3 different categories: 26 (55%) studies predicted cardiac arrest by analyzing specific parameters or variables of the patients, whereas 16 (34%) studies developed an AI-based warning system. The remaining 11% (5/47) of studies focused on distinguishing patients at high risk of cardiac arrest from patients who were not at risk. Two studies focused on the pediatric population, and the rest focused on adults (45/47, 96%). Most of the studies used data sets with a size of <10,000 samples (32/47, 68%). Machine learning models were the most prominent branch of AI used in the prediction of cardiac arrest in the studies (38/47, 81%), and the most used algorithm was the neural network (23/47, 49%). K-fold cross-validation was the most used algorithm evaluation tool reported in the studies (24/47, 51%). CONCLUSIONS AI is extensively used to predict cardiac arrest in different patient settings. Technology is expected to play an integral role in improving cardiac medicine. There is a need for more reviews to learn the obstacles to the implementation of AI technologies in clinical settings. Moreover, research focusing on how to best provide clinicians with support to understand, adapt, and implement this technology in their practice is also necessary.
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Affiliation(s)
- Asma Alamgir
- College of Science and Engineering, Hamad Bin Khalifa University, Qatar Foundation, Doha, Qatar
| | - Osama Mousa
- College of Science and Engineering, Hamad Bin Khalifa University, Qatar Foundation, Doha, Qatar
| | - Zubair Shah
- College of Science and Engineering, Hamad Bin Khalifa University, Qatar Foundation, Doha, Qatar
- Centre for Health Informatics, Australian Institute of Health Innovation, Macquarie University, Sydney, Australia
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Detection of sudden cardiac death by a comparative study of heart rate variability in normal and abnormal heart conditions. Biocybern Biomed Eng 2020. [DOI: 10.1016/j.bbe.2020.06.003] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
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Tiam Kapen P, Kouam Kouam SU, Tchuen G. A comparative study between normal electrocardiogram signal and those of some cardiac arrhythmias based on McSharry mathematical model. AUSTRALASIAN PHYSICAL & ENGINEERING SCIENCES IN MEDICINE 2019; 42:511-528. [DOI: 10.1007/s13246-019-00752-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/03/2018] [Accepted: 03/27/2019] [Indexed: 10/27/2022]
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Toward analyzing and synthesizing previous research in early prediction of cardiac arrest using machine learning based on a multi-layered integrative framework. J Biomed Inform 2018; 88:70-89. [DOI: 10.1016/j.jbi.2018.10.008] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2018] [Revised: 09/03/2018] [Accepted: 10/28/2018] [Indexed: 02/01/2023]
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Amezquita-Sanchez JP, Valtierra-Rodriguez M, Adeli H, Perez-Ramirez CA. A Novel Wavelet Transform-Homogeneity Model for Sudden Cardiac Death Prediction Using ECG Signals. J Med Syst 2018; 42:176. [PMID: 30117048 DOI: 10.1007/s10916-018-1031-5] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2018] [Accepted: 08/07/2018] [Indexed: 02/01/2023]
Abstract
Sudden cardiac death (SCD) is one of the main causes of death among people. A new methodology is presented for predicting the SCD based on ECG signals employing the wavelet packet transform (WPT), a signal processing technique, homogeneity index (HI), a nonlinear measurement for time series signals, and the Enhanced Probabilistic Neural Network classification algorithm. The effectiveness and usefulness of the proposed method is evaluated using a database of measured ECG data acquired from 20 SCD and 18 normal patients. The proposed methodology presents the following significant advantages: (1) compared with previous works, the proposed methodology achieves a higher accuracy using a single nonlinear feature, HI, thus requiring low computational resource for predicting an SCD onset in real-time, unlike other methodologies proposed in the literature where a large number of nonlinear features are used to predict an SCD event; (2) it is capable of predicting the risk of developing an SCD event up to 20 min prior to the onset with a high accuracy of 95.8%, superseding the prior 12 min prediction time reported recently, and (3) it uses the ECG signal directly without the need for transforming the signal to a heart rate variability signal, thus saving time in the processing.
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Affiliation(s)
- Juan P Amezquita-Sanchez
- Faculty of Engineering, Departments Biomedical and Electromechanical, ENAP-RG, Autonomous University of Queretaro (UAQ), Campus San Juan del Río, Río Moctezuma 249, Col. San Cayetano, C. P, 76807, San Juan del Río, Qro., Mexico
| | - Martin Valtierra-Rodriguez
- Faculty of Engineering, Departments Biomedical and Electromechanical, ENAP-RG, Autonomous University of Queretaro (UAQ), Campus San Juan del Río, Río Moctezuma 249, Col. San Cayetano, C. P, 76807, San Juan del Río, Qro., Mexico
| | - Hojjat Adeli
- Departments Biomedical Informatics, Neuroscience, and Neurology, The Ohio State University, 470 Hitchcock Hall, 2070 Neil Avenue, Columbus, OH, 43210, USA.
| | - Carlos A Perez-Ramirez
- Faculty of Engineering, Departments Biomedical and Electromechanical, ENAP-RG, Autonomous University of Queretaro (UAQ), Campus San Juan del Río, Río Moctezuma 249, Col. San Cayetano, C. P, 76807, San Juan del Río, Qro., Mexico
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Caulier-Cisterna R, Muñoz-Romero S, Sanromán-Junquera M, García-Alberola A, Rojo-Álvarez JL. A new approach to the intracardiac inverse problem using Laplacian distance kernel. Biomed Eng Online 2018; 17:86. [PMID: 29925384 PMCID: PMC6011421 DOI: 10.1186/s12938-018-0519-z] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2018] [Accepted: 06/13/2018] [Indexed: 11/30/2022] Open
Abstract
Background The inverse problem in electrophysiology consists of the accurate estimation of the intracardiac electrical sources from a reduced set of electrodes at short distances and from outside the heart. This estimation can provide an image with relevant knowledge on arrhythmia mechanisms for the clinical practice. Methods based on truncated singular value decomposition (TSVD) and regularized least squares require a matrix inversion, which limits their resolution due to the unavoidable low-pass filter effect of the Tikhonov regularization techniques. Methods We propose to use, for the first time, a Mercer’s kernel given by the Laplacian of the distance in the quasielectrostatic field equations, hence providing a Support Vector Regression (SVR) formulation by following the principles of the Dual Signal Model (DSM) principles for creating kernel algorithms. Results Simulations in one- and two-dimensional models show the performance of our Laplacian distance kernel technique versus several conventional methods. Firstly, the one-dimensional model is adjusted for yielding recorded electrograms, similar to the ones that are usually observed in electrophysiological studies, and suitable strategy is designed for the free-parameter search. Secondly, simulations both in one- and two-dimensional models show larger noise sensitivity in the estimated transfer matrix than in the observation measurements, and DSM−SVR is shown to be more robust to noisy transfer matrix than TSVD. Conclusion These results suggest that our proposed DSM−SVR with Laplacian distance kernel can be an efficient alternative to improve the resolution in current and emerging intracardiac imaging systems.
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Affiliation(s)
- Raúl Caulier-Cisterna
- Department of Signal Theory and Communications and Telematics and Computation, Rey Juan Carlos University, Camino del Molino s/n, 28943, Fuenlabrada, Madrid, Spain
| | - Sergio Muñoz-Romero
- Department of Signal Theory and Communications and Telematics and Computation, Rey Juan Carlos University, Camino del Molino s/n, 28943, Fuenlabrada, Madrid, Spain.,Center for Computational Simulation, Universidad Politécnica de Madrid, Madrid, Spain
| | - Margarita Sanromán-Junquera
- Department of Signal Theory and Communications and Telematics and Computation, Rey Juan Carlos University, Camino del Molino s/n, 28943, Fuenlabrada, Madrid, Spain
| | - Arcadi García-Alberola
- Arrhythmia Unit, Hospital General Universitario Virgen de la Arrixaca, El Palmar, Murcia, Spain
| | - José Luis Rojo-Álvarez
- Department of Signal Theory and Communications and Telematics and Computation, Rey Juan Carlos University, Camino del Molino s/n, 28943, Fuenlabrada, Madrid, Spain. .,Center for Computational Simulation, Universidad Politécnica de Madrid, Madrid, Spain.
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ECG Signal De-noising and Baseline Wander Correction Based on CEEMDAN and Wavelet Threshold. SENSORS 2017; 17:s17122754. [PMID: 29182591 PMCID: PMC5751563 DOI: 10.3390/s17122754] [Citation(s) in RCA: 61] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/13/2017] [Revised: 11/21/2017] [Accepted: 11/23/2017] [Indexed: 11/17/2022]
Abstract
A novel electrocardiogram (ECG) signal de-noising and baseline wander correction method based on complete ensemble empirical mode decomposition with adaptive noise (CEEMDAN) and wavelet threshold is proposed. Although CEEMDAN is based on empirical mode decomposition (EMD), it represents a significant improvement of the original EMD by overcoming the mode-mixing problem. However, there has been no previous study on using CEEMDAN to de-noise ECG signals, to the authors’ best knowledge. In the proposed method, the original noisy ECG signal is decomposed into a series of intrinsic mode functions (IMFs) sorted from high to low frequency by CEEMDAN. Each IMF is then analyzed by the autocorrelation method to find out the first few high frequency IMFs containing random noise, and these IMFs should be de-noised by the wavelet threshold. The zero-crossing rate (ZCR) of all IMFs, including final residue, are computed, and the IMFs with ZCR less than a certain value are removed. Finally, the remaining IMFs are reconstructed to obtain the clean ECG signal. The proposed algorithm is validated through experiments using the MIT–BIH ECG databases, and the results show that the random noise in the ECG signal can be effectively suppressed, and at the same time the baseline wander can be corrected efficiently.
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