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Bertran-Llorens S, Zhou W, Palazzolo MA, Colpa DL, Euverink GJW, Krooneman J, Deuss PJ. ALACEN: A Holistic Herbaceous Biomass Fractionation Process Attaining a Xylose-Rich Stream for Direct Microbial Conversion to Bioplastics. ACS SUSTAINABLE CHEMISTRY & ENGINEERING 2024; 12:7724-7738. [PMID: 38783842 PMCID: PMC11110678 DOI: 10.1021/acssuschemeng.3c08414] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/20/2023] [Revised: 04/17/2024] [Accepted: 04/18/2024] [Indexed: 05/25/2024]
Abstract
Lignocellulose biorefining is a promising technology for the sustainable production of chemicals and biopolymers. Usually, when one component is focused on, the chemical nature and yield of the others are compromised. Thus, one of the bottlenecks in biomass biorefining is harnessing the maximum value from all of the lignocellulosic components. Here, we describe a mild stepwise process in a flow-through setup leading to separate flow-out streams containing cinnamic acid derivatives, glucose, xylose, and lignin as the main components from different herbaceous sources. The proposed process shows that minimal degradation of the individual components and conservation of their natural structure are possible. Under optimized conditions, the following fractions are produced from wheat straw based on their respective contents in the feed by the ALkaline ACid ENzyme process: (i) 78% ferulic acid from a mild ALkali step, (ii) 51% monomeric xylose free of fermentation inhibitors by mild ACidic treatment, (iii) 82% glucose from ENzymatic degradation of cellulose, and (iv) 55% native-like lignin. The benefits of using the flow-through setup are demonstrated. The retention of the lignin aryl ether structure was confirmed by HSQC NMR, and this allowed monomers to form from hydrogenolysis. More importantly, the crude xylose-rich fraction was shown to be suitable for producing polyhydroxybutyrate bioplastics. The direct use of the xylose-rich fraction by means of the thermophilic bacteria Schlegelella thermodepolymerans matched 91% of the PHA produced with commercial pure xylose, achieving 138.6 mgPHA/gxylose. Overall, the ALACEN fractionation method allows for a holistic valorization of the principal components of herbaceous biomasses.
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Affiliation(s)
- Salvador Bertran-Llorens
- Green
Chemical Reaction Engineering, Engineering and Technology Institute
Groningen (ENTEG), University of Groningen, Nijenborgh 4, Groningen 9747 AG, The Netherlands
| | - Wen Zhou
- Products
and Processes for Biotechnology, Engineering and Technology Institute
Groningen (ENTEG), Faculty of Science and Engineering, University of Groningen, Nijenborgh 4, Groningen 9747 AG, The Netherlands
| | - Martín A. Palazzolo
- Green
Chemical Reaction Engineering, Engineering and Technology Institute
Groningen (ENTEG), University of Groningen, Nijenborgh 4, Groningen 9747 AG, The Netherlands
- Instituto
Interdisciplinario de Ciencias Básicas (ICB, UNCuyo-CONICET), Padre Jorge Contreras 1300, Mendoza 5500, Argentina
- Instituto
de Investigaciones en Tecnología Química (INTEQUI),
FQByF, Universidad Nacional de San Luis,
CONICET, Almirante Brown
1455, San Luis 5700, Argentina
| | - Dana l. Colpa
- Products
and Processes for Biotechnology, Engineering and Technology Institute
Groningen (ENTEG), Faculty of Science and Engineering, University of Groningen, Nijenborgh 4, Groningen 9747 AG, The Netherlands
| | - Gert-Jan W. Euverink
- Products
and Processes for Biotechnology, Engineering and Technology Institute
Groningen (ENTEG), Faculty of Science and Engineering, University of Groningen, Nijenborgh 4, Groningen 9747 AG, The Netherlands
| | - Janneke Krooneman
- Products
and Processes for Biotechnology, Engineering and Technology Institute
Groningen (ENTEG), Faculty of Science and Engineering, University of Groningen, Nijenborgh 4, Groningen 9747 AG, The Netherlands
- Bioconversion
and Fermentation Technology, Research Centre Biobased Economy, Hanze University of Applied Sciences, Zernikeplein 11, Groningen 9747 AS, The Netherlands
| | - Peter J. Deuss
- Green
Chemical Reaction Engineering, Engineering and Technology Institute
Groningen (ENTEG), University of Groningen, Nijenborgh 4, Groningen 9747 AG, The Netherlands
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2
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Shahid S, Mosrati R, Corroler D, Amiel C, Gaillard JL. Bioconversion of glycerol into polyhydroxyalkanoates through an atypical metabolism shift using Priestia megaterium during fermentation processes: A statistical analysis of carbon and nitrogen source concentrations. Int J Biol Macromol 2024; 256:128116. [PMID: 37979765 DOI: 10.1016/j.ijbiomac.2023.128116] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2023] [Revised: 11/03/2023] [Accepted: 11/14/2023] [Indexed: 11/20/2023]
Abstract
Polyhydroxyalkanoates (PHA) are bioplastics which are well known as intracellular energy storage compounds and are produced in a large number of prokaryotic species. These bio-based inclusions are biodegradable, biocompatible and environmental friendly. Industrial production of, short chain and medium chain length PHA, involves the use of microorganisms and their enzymes. Priestia megaterium previously known as Bacillus megaterium is a well-recognized bacterium for producing short chain length PHA. This study focuses to characterize this bacterium for the production of medium chain length PHA, and a novel blend of both types of monomers having enhanced properties and versatile applications. Statistical analyses and simulations were used to demonstrate that cell dry weight can be derived as a function of OD600 and PHA content. Optimization of growth conditions resulted in the maximum PHA production as: 0. 05 g. g-x. H-1, where the rate of PHA production was 0.28 g L-1. H-1 and PHA concentration was 4.94 g. L-1. This study also demonstrated FTIR to be a semi quantitative tool for PHA production. Moreover, conversion of scl-PHA to mcl-PHA with reference to time intermissions using GC-FID are shown.
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Affiliation(s)
- Salma Shahid
- Department of Biochemistry, Government College Women University, Faisalabad, Pakistan.
| | - Ridha Mosrati
- Unité de Recherche ABTE, (Alimentation-Bioprocédés-Toxicologie-Environnements), EA 4651, Esplanade de la Paix, Université de Caen Normandie, 14032 Caen Cedex 5, France
| | - David Corroler
- Unité de Recherche ABTE, (Alimentation-Bioprocédés-Toxicologie-Environnements), EA 4651, Esplanade de la Paix, Université de Caen Normandie, 14032 Caen Cedex 5, France
| | - Caroline Amiel
- Unité de Recherche ABTE, (Alimentation-Bioprocédés-Toxicologie-Environnements), EA 4651, Esplanade de la Paix, Université de Caen Normandie, 14032 Caen Cedex 5, France
| | - Jean-Luc Gaillard
- Unité de Recherche ABTE, (Alimentation-Bioprocédés-Toxicologie-Environnements), EA 4651, Esplanade de la Paix, Université de Caen Normandie, 14032 Caen Cedex 5, France
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Raunhan R, Jantharadej K, Mhuantong W, Chanprateep Napathorn S, Boonchayaanant Suwannasilp B. Valorization of food waste derived anaerobic digestate into polyhydroxyalkanoate (PHA) using Thauera mechernichensis TL1. WASTE MANAGEMENT (NEW YORK, N.Y.) 2023; 171:248-258. [PMID: 37678073 DOI: 10.1016/j.wasman.2023.08.039] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/25/2023] [Revised: 08/04/2023] [Accepted: 08/29/2023] [Indexed: 09/09/2023]
Abstract
Polyhydroxyalkanoate (PHA) is a biopolymer that can be used as a bioplastic, offering a green alternative to petroleum-based plastics. In this study, we investigated PHA production using Thauera mechernichensis TL1. The optimal molar C/N ratio was determined to be 20 from among the ratios of 4, 20, 40, 80, and 200 and in the absence of nitrogen. Food waste anaerobic digestate, mainly comprised of acetate and propionate, was used as the carbon source for PHA production by T. mechernichensis TL1, resulting in a maximum PHA content of 23.98 ± 0.52 wt% (0.52 ± 0.02 g/L PHA) with a PHA productivity of 0.043 g/L-h PHA. In addition, when using acetate and propionate, T. mechernichensis TL1 produced PHA with a maximum PHA content of 57.43 ± 2.84 wt% (2.04 ± 0.11 g/L PHA) and 50.94 ± 1.61 wt% (2.62 ± 0.16 g/L PHA), with a PHA productivity of 0.092 g/L-h PHA and 0.070 g/L-h PHA, respectively. Proton nuclear magnetic resonance spectroscopy (1H NMR) confirmed polyhydroxybutyrate (PHB) production using acetate as a carbon source, and poly(3-hydroxybutyrate-co-3-hydroxyvalerate) (PHBV) production using propionate or food waste anaerobic digestate as the carbon source. The whole-genome analysis of T. mechernichensis TL1 confirmed the existence of a PHA biosynthesis pathway, with the presence of phaA, phaB, phaC (Class I and Class II), and phaJ genes. This study was the first to demonstrate Thauera sp.'s ability to produce PHA from food waste anaerobic digestate, rendering it as a promising candidate for PHA-producing bacteria for the valorization of food waste.
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Affiliation(s)
- Rasita Raunhan
- Department of Environmental Engineering, Faculty of Engineering, Chulalongkorn University, Bangkok, Thailand
| | - Krittayapong Jantharadej
- Department of Environmental Engineering, Faculty of Engineering, Chulalongkorn University, Bangkok, Thailand
| | - Wuttichai Mhuantong
- National Center for Genetic Engineering and Biotechnology, Enzyme Technology Research Team, Pathum Thani, Thailand
| | | | - Benjaporn Boonchayaanant Suwannasilp
- Department of Environmental Engineering, Faculty of Engineering, Chulalongkorn University, Bangkok, Thailand; Biotechnology for Wastewater Engineering Research Unit, Chulalongkorn University, Bangkok, Thailand; Research Network of NANOTEC-CU (RNN), Bangkok, Thailand.
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Rosas-Echeverría K, Fall C, Gutiérrez-Segura E, Romero-Camacho MP, Ba KM. Mechanisms of persistence and impact of ordinary heterotrophic organisms in aerobic granular sludge. BIORESOURCE TECHNOLOGY 2023:129346. [PMID: 37336447 DOI: 10.1016/j.biortech.2023.129346] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/10/2023] [Revised: 06/08/2023] [Accepted: 06/16/2023] [Indexed: 06/21/2023]
Abstract
The stability of granules, contaminant removal and microbial structure of an aerobic granular sludge (AGS) process were investigated with a focus on ordinary heterotrophic organisms (OHOs). Long-term stable granules and high removals of COD (97 %), NH4+ (98 %), P (85 %) and total N (77 %) were achieved. Sequencing analyses identified 6.6 % of phosphorus-accumulating organisms in the sludge, concordant with the observed bio-P removal capacity. However, OHOs were the most abundant bacteria in the sludge (70-93 %) without resulting in unstable aggregates. Under current dogmas of microbial competition in activated sludge, it seemed contradictory that OHOs could persist in the long term in the AGS where COD was depleted beginning in the anaerobic phase. Microbial analyses showed that OHOs could survive in granules by micropredation, proteolysis, fermentation and EPS consumption. Heterotrophic-nitrification/ aerobic-denitrification was an active pathway in the AGS. These findings contribute to a better understanding of microbial competition in AGS and its stability.
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Affiliation(s)
- K Rosas-Echeverría
- Universidad Autónoma del Estado de México, Facultad de Química, Col Ciprés, C.P. 50120, Toluca, Mexico
| | - C Fall
- Universidad Autónoma del Estado de México (UAEM), Instituto Interamericano de Ciencias y Tecnología del Agua (IITCA), Carr. Toluca-Ixtlahuaca, km. 14.5, C.P. 50120, San Cayetano, Toluca, Mexico.
| | - E Gutiérrez-Segura
- Universidad Autónoma del Estado de México, Facultad de Química, Col Ciprés, C.P. 50120, Toluca, Mexico
| | - M P Romero-Camacho
- Universidad Autónoma del Estado de México (UAEM), Instituto Interamericano de Ciencias y Tecnología del Agua (IITCA), Carr. Toluca-Ixtlahuaca, km. 14.5, C.P. 50120, San Cayetano, Toluca, Mexico
| | - K M Ba
- Universidad Autónoma del Estado de México (UAEM), Instituto Interamericano de Ciencias y Tecnología del Agua (IITCA), Carr. Toluca-Ixtlahuaca, km. 14.5, C.P. 50120, San Cayetano, Toluca, Mexico
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Zhou W, Bergsma S, Colpa DI, Euverink GJW, Krooneman J. Polyhydroxyalkanoates (PHAs) synthesis and degradation by microbes and applications towards a circular economy. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2023; 341:118033. [PMID: 37156023 DOI: 10.1016/j.jenvman.2023.118033] [Citation(s) in RCA: 12] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/28/2022] [Revised: 04/15/2023] [Accepted: 04/25/2023] [Indexed: 05/10/2023]
Abstract
Overusing non-degradable plastics causes a series of environmental issues, inferring a switch to biodegradable plastics. Polyhydroxyalkanoates (PHAs) are promising biodegradable plastics that can be produced by many microbes using various substrates from waste feedstock. However, the cost of PHAs production is higher compared to fossil-based plastics, impeding further industrial production and applications. To provide a guideline for reducing costs, the potential cheap waste feedstock for PHAs production have been summarized in this work. Besides, to increase the competitiveness of PHAs in the mainstream plastics economy, the influencing parameters of PHAs production have been discussed. The PHAs degradation has been reviewed related to the type of bacteria, their metabolic pathways/enzymes, and environmental conditions. Finally, the applications of PHAs in different fields have been presented and discussed to induce comprehension on the practical potentials of PHAs.
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Affiliation(s)
- Wen Zhou
- Products and Processes for Biotechnology, Engineering and Technology Institute Groningen, Faculty of Science and Engineering, University of Groningen, Groningen, the Netherlands
| | - Simon Bergsma
- Products and Processes for Biotechnology, Engineering and Technology Institute Groningen, Faculty of Science and Engineering, University of Groningen, Groningen, the Netherlands
| | - Dana Irene Colpa
- Products and Processes for Biotechnology, Engineering and Technology Institute Groningen, Faculty of Science and Engineering, University of Groningen, Groningen, the Netherlands
| | - Gert-Jan Willem Euverink
- Products and Processes for Biotechnology, Engineering and Technology Institute Groningen, Faculty of Science and Engineering, University of Groningen, Groningen, the Netherlands
| | - Janneke Krooneman
- Products and Processes for Biotechnology, Engineering and Technology Institute Groningen, Faculty of Science and Engineering, University of Groningen, Groningen, the Netherlands; Bioconversion and Fermentation Technology, Research Centre Biobased Economy, Hanze University of Applied Sciences, Groningen, the Netherlands.
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6
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Thauera sp. Sel9, a new bacterial strain for polyhydroxyalkanoates production from volatile fatty acids. N Biotechnol 2022; 72:71-79. [PMID: 36191843 DOI: 10.1016/j.nbt.2022.09.004] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2022] [Revised: 09/25/2022] [Accepted: 09/29/2022] [Indexed: 12/14/2022]
Abstract
Thauera is one of the main genera involved in polyhydroxyalkanoate (PHA) production in microbial mixed cultures (MMCs) from volatile fatty acids (VFAs). However, no Thauera strains involved in PHA accumulation have been obtained in pure culture so far. This study is the first report of the isolation and characterization of a Thauera sp. strain, namely Sel9, obtained from a sequencing batch reactor (S-SBR) set up for the selection of PHA storing biomass. The 16S rRNA gene evidenced a high sequence similarity with T. butanivorans species. Genome sequencing identified all genes involved in PHA synthesis, regulation and degradation. The strain Sel9 was able to grow with an optimum of chemical oxygen demand-to-nitrogen (COD:N) ratio ranging from 4.7 to 18.9. Acetate, propionate, butyrate and valerate were used as sole carbon and energy sources: a lag phase of 72 h was observed in presence of propionate. Final production of PHAs, achieved with a COD:N ratio of 75.5, was 60.12 ± 2.60 %, 49.31 ± 0.7 %, 37.31 ± 0.43 % and 18.06 ± 3.81 % (w/w) by using butyrate, acetate, valerate and propionate as substrates, respectively. Also, the 3-hydroxybutyrate/3-hydroxyvalerate ratio reflected the type of carbon sources used: 12.30 ± 0.82 for butyrate, 3.56 ± 0.02 for acetate, 0.93 ± 0.03 for valerate and 0.76 ± 0.02 for propionate. The results allow a better elucidation of the role of Thauera in MMCs and strongly suggest a possible exploitation of Thauera sp. Sel9 for a cost-effective and environmentally friendly synthesis of PHAs using VFAs as substrate.
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7
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Zhou W, Colpa DI, Geurkink B, Euverink GJW, Krooneman J. The impact of carbon to nitrogen ratios and pH on the microbial prevalence and polyhydroxybutyrate production levels using a mixed microbial starter culture. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 811:152341. [PMID: 34921889 DOI: 10.1016/j.scitotenv.2021.152341] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/09/2021] [Revised: 11/16/2021] [Accepted: 12/08/2021] [Indexed: 06/14/2023]
Abstract
Growth conditions have been frequently studied in optimizing polyhydroxybutyrate (PHB) production, while few studies were performed to unravel the dynamic mixed microbial consortia (MMCs) in the process. In this study, the relationship between growth conditions (C/N ratios and pH) and the corresponding key-microbes were identified and monitored during PHB accumulation. The highest PHB level (70 wt% of dry cell mass) was obtained at pH 9, C/N 40, and acetic acid 10 g/L. Linking the dominant genera with the highest point of PHB accumulation, Thauera was the most prevalent species in all MMCs of pH 9, except when a C/N ratio of 1 was applied. Notably, dominant bacteria shifted at pH 7 (C/N 10) from Thauera (0 h) to Paracoccus, and subsequently to Alcaligenes following the process of PHB accumulation and consumption. Further understanding of the relationship between the structure of the microbial community and the performance will be beneficial for regulating and obtaining high PHB accumulation within an MMC. Our study illustrates the impact of C/N ratios and pH on microbial prevalence and PHB production levels using a mixed microbial starter culture. This knowledge will broaden industrial perspectives for regulating high PHB production and timely harvesting.
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Affiliation(s)
- Wen Zhou
- Products and Processes for Biotechnology, Engineering and Technology Institute Groningen, Faculty of Science and Engineering, University of Groningen, Groningen, the Netherlands
| | - Dana Irene Colpa
- Products and Processes for Biotechnology, Engineering and Technology Institute Groningen, Faculty of Science and Engineering, University of Groningen, Groningen, the Netherlands
| | - Bert Geurkink
- Wetsus, European Centre of Excellence for Sustainable Water Technology, Leeuwarden, the Netherlands
| | - Gert-Jan Willem Euverink
- Products and Processes for Biotechnology, Engineering and Technology Institute Groningen, Faculty of Science and Engineering, University of Groningen, Groningen, the Netherlands
| | - Janneke Krooneman
- Products and Processes for Biotechnology, Engineering and Technology Institute Groningen, Faculty of Science and Engineering, University of Groningen, Groningen, the Netherlands.
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Frison N, Andreolli M, Botturi A, Lampis S, Fatone F. Effects of the Sludge Retention Time and Carbon Source on Polyhydroxyalkanoate-Storing Biomass Selection under Aerobic-Feast and Anoxic-Famine Conditions. ACS SUSTAINABLE CHEMISTRY & ENGINEERING 2021; 9:9455-9464. [PMID: 35059238 PMCID: PMC8764655 DOI: 10.1021/acssuschemeng.1c02973] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/03/2021] [Revised: 06/28/2021] [Indexed: 06/02/2023]
Abstract
Polyhydroxyalkanoates (PHAs) are versatile biodegradable polymers produced by bacteria and are suitable for many downstream applications. They can be produced inexpensively from mixed microbial cultures under feast and famine conditions in the presence of biobased volatile fatty acids (VFAs). Here, we investigated the effect of changing the sludge retention time (SRT) and the addition of fermented cellulosic primary sludge (CPS) as a carbon source on the selection of PHA-storing biomass when applying the feast and famine strategy under aerobic and anoxic conditions, respectively. Increasing the SRT from 5 to 7-10 days enhanced PHA yields under feast conditions from 0.18 gCODPHA/gCODVFA (period 1) to 0.40 gCODPHA/gCODVFA (period 2). The use of fermented CPS as a carbon source (period 3) increased PHA yields to 0.62 gCODPHA/gCODVFA despite the presence of biodegradable non-VFA fractions. Microbial characterization by denaturing gradient gel electrophoresis and fluorescence in situ hybridization revealed high microbial speciation during the three experimental periods. In period 3, the dominant genera were Thauera, Paracoccus, and Azoarcus, which accounted for ∼95% of the total microbial biomass.
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Affiliation(s)
- Nicola Frison
- Department
of Biotechnology, University of Verona, Strada Le Grazie 15, 37134 Verona, Italy
| | - Marco Andreolli
- Department
of Biotechnology, University of Verona, Strada Le Grazie 15, 37134 Verona, Italy
| | - Alice Botturi
- Department
of Biotechnology, University of Verona, Strada Le Grazie 15, 37134 Verona, Italy
| | - Silvia Lampis
- Department
of Biotechnology, University of Verona, Strada Le Grazie 15, 37134 Verona, Italy
| | - Francesco Fatone
- Department
of Science and Engineering of Materials, Environment and Urban Planning-SIMAU, Marche Polytechnic University, via Brecce Bianche 12, 60131 Ancona, Italy
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Del Frari G, Ferreira RB. Microbial Blends: Terminology Overview and Introduction of the Neologism "Skopobiota". Front Microbiol 2021; 12:659592. [PMID: 34276594 PMCID: PMC8283781 DOI: 10.3389/fmicb.2021.659592] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2021] [Accepted: 06/07/2021] [Indexed: 11/30/2022] Open
Affiliation(s)
- Giovanni Del Frari
- LEAF-Linking Landscape, Environment, Agriculture and Food-Research Center, Instituto Superior de Agronomia, Universidade de Lisboa, Lisbon, Portugal
| | - Ricardo Boavida Ferreira
- LEAF-Linking Landscape, Environment, Agriculture and Food-Research Center, Instituto Superior de Agronomia, Universidade de Lisboa, Lisbon, Portugal
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