Synergism between Cutinase and Pectinase in the Hydrolysis of Cotton Fibers’ Cuticle

Eight Up-Coming Biotech Tools to Combat Climate Crisis

Biotechnology has a high potential to substantially contribute to a low-carbon society. Several green processes are already well established, utilizing the unique capacity of living cells or their instruments. Beyond that, the authors believe that there are new biotechnological procedures in the pipeline which have the momentum to add to this ongoing change in our economy. Eight promising biotechnology tools were selected by the authors as potentially impactful game changers: (i) the Wood-Ljungdahl pathway, (ii) carbonic anhydrase, (iii) cutinase, (iv) methanogens, (v) electro-microbiology, (vi) hydrogenase, (vii) cellulosome and, (viii) nitrogenase. Some of them are fairly new and are explored predominantly in science labs. Others have been around for decades, however, with new scientific groundwork that may rigorously expand their roles. In the current paper, the authors summarize the latest state of research on these eight selected tools and the status of their practical implementation. We bring forward our arguments on why we consider these processes real game changers.

Eco-friendly scouring of cotton knit fabrics with enzyme and soapnut: An alternative to conventional NaOH and synthetic surfactant based scouring

Eye-catching, aesthetic fashions often suppress its untold dark story of unsustainable processing including hazardous wet treatment. Considering the risks imposed by conventional cotton scouring and following the trend of scouring with enzymes, this study was undertaken to evaluate the bioscouring of cotton knit fabric involving saponin-enriched soapnut as a natural surfactant, applied from a bath requiring a few chemicals and gentle processing conditions, contributing to the eco-friendliness. The proposed application was compared to synthetic detergent engaged enzymatic scouring as well as the classic scouring with Sodium hydroxide. A cellulolytic pectate lyase enzyme (0.5%-0.8% o.w.f) was applied at 55 °C for 60 min at pH 5-5.5 with varying surfactant concentrations. A low concentration of soapnut extract (1 g/L to 2 g/L) was found sufficient to assist in the removal of non-cellulosic impurities from the cotton fabric after bioscouring with 0.5% o.w.f. enzyme, leading to good hydrophilicity indicated by an average wetting time of 4.86 s at the expense of 3.1%-3.8% weight loss. The scoured fabrics were further dyed with 1% o.w.f. reactive dye to observe the dyeing performance. The treated samples were characterized in terms of weight loss, wettability, bursting strength, whiteness index, and color value. The proposed application confronted level dyeing and the ratings for color fastness to washing and rubbing were 4-5 for all of the samples scoured enzymatically with soapnut. The study was also statistically analyzed and concluded.

Concept for the Use of Cotton Waste Hydrolysates in Fermentation Media for Biofuel Production

Currently, most cotton textile waste is sent to landfill. However, due to the use of synthetic additives and the chemical treatment of cotton fibers, cotton textile waste is difficult to biodegrade. Cotton textile waste can also be subjected to material recycling, or to incineration/gasification to produce energy. Here, we present the optimization of acid hydrolysis of cotton yarn fibers for glucose efficiency. The cotton yarn hydrolysates showed great potential for replacing simple sugar solutions in fermentation media. The highest glucose concentration was obtained in the hydrolysates of cotton yarn hydrolyzed in a 2% solution of sulfuric acid or phosphoric acid at 140–160 °C for 2 h. After 2 h of hydrolysis at 140 °C with 2% H3PO4, the concentration of glucose in the cotton yarn hydrolysate (13.19 g/L) increased fivefold compared with cotton yarn treated under the same conditions with H2SO4 (2.65 g/L). The structural modifications in the solid residues after acid hydrolysis were analyzed using a scanning electron microscope with energy dispersive spectroscopy (SEM-EDS), attenuated total reflectance Fourier-transform infrared spectroscopy (FTIR-ATR), and Raman spectroscopy. The SEM images, IR spectra, and Raman spectra revealed that the most significant changes in the morphology of the fibers occurred when the process was carried out at high temperatures (≥140 °C). Better growth of the yeast strains Saccharomyces cerevisiae Ethanol Red and Saccharomyces cerevisiae Tokay ŁOCK0204 was observed in the medium containing phosphoric acid hydrolysate. The maximum methane yield of 278 dm3/kgVS and the maximum hydrogen yield of 42 dm/kgVS were reported for cotton yarn waste after pretreatment with H3PO4. This might have been linked to the beneficial effect of phosphorus, which is a key nutrient for anaerobic digestion. The proposed hydrolysis method does not generate fermentation inhibitors.

A Novel Actinobacterial Cutinase Containing a Non-Catalytic Polymer-Binding Domain

The single putative cutinase-encoding gene from the genome of Kineococcus radiotolerans SRS30216 was cloned and expressed in Escherichia coli as a secreted fusion protein, designated YebF-KrCUT, where YebF is the extracellular carrier protein. The 294-amino acid sequence of KrCUT is unique among currently characterized cutinases by having a C-terminal extension that consists of a short (Pro-Thr)-rich linker and a 55-amino-acid region resembling the substrate binding domain of poly(hydroxybutyrate) (PHB) depolymerases. Phylogenetically, KrCUT takes a unique position among known cutinases and cutinase-like proteins of bacterial and fungal origin. A modeled structure of KrCUT, although displaying a typical α/ß hydrolase fold, shows some unique loops close to the catalytic site. The 39-kDa YebF-KrCUT fusion protein and a truncated variant thereof were purified to electrophoretic homogeneity and functionally characterized. The melting temperatures (T_m) of KrCUT and its variant KrCUT206 devoid of the putative PHB-binding domain were established to be very similar at 50-51°C. Cutinase activity was confirmed by the appearance of characteristic cutin components, C₁₆ and C₁₈ hydroxyl fatty acids, in the mass chromatograms following incubation of KrCUT with apple cutin as substrate. KrCUT also efficiently degraded synthetic polyesters such as polycaprolactone and poly(1,3-propylene adipate). Although incapable of PHB depolymerization, KrCUT could efficiently bind PHB, confirming the predicted characteristic of the C-terminal region. KrCUT also potentiated the activity of pectate lyase in the degradation of pectin from hemp fibres. This synergistic effect is relevant to the enzyme retting process of natural fibres. IMPORTANCE. To date only a limited number of cutinases have been isolated and characterized from nature, the majority being sourced from phytopathogenic fungi and thermophilic bacteria. The significance of our research relates to the identification and characterization of a unique member of microbial cutinases, of name KrCUT, that was derived from the genome of the Gram-positive Kineococcus radiotolerans SRS30216, a highly radiation-resistant actinobacterium. Given the wide-ranging importance of cutinases in applications such as the degradation of natural and synthetic polymers, in the textile industry, in laundry detergents, or in biocatalysis (e.g., transesterification reactions), our results could foster new research leading to broader biotechnological impacts. This study also demonstrated that genome mining or prospecting is a viable means to discover novel biocatalysts as environmentally friendly and biotechnological tool.