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Serrano JL. Water-Soluble Pd-Imidate Complexes as Versatile Catalysts for the Modification of Unprotected Halonucleosides. CHEM REC 2022; 22:e202200179. [PMID: 36094784 DOI: 10.1002/tcr.202200179] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2022] [Revised: 08/24/2022] [Indexed: 12/15/2022]
Abstract
Modification of unprotected nucleosides has been attracting continuous interest, since these building blocks themselves and their phosphate-upgraded corresponding nucleotides have shown a plethora of uses in fields like biochemistry or pharmacy. Pd-catalyzed cross-coupling reactions, conducted in water or its mixtures with polar organic solvents, have frequently been the researchers' choice for the functionalization of the purine/pyrimidine base of the unprotected nucleosides. In this scenario, the availability of hydrophilic ligands and its water-soluble palladium complexes has markedly set the pace of the advances. The approach of our group to the synthesis of such complexes, Pd-imidates specifically, has faced critical stages, namely the jump to synthesize water soluble complexes from our experience working in conventional solvents, the preparation of phosphine free complexes and the overall goal of getting catalytic systems able to work close to room temperature. The continuous feedback with Kapdi's group, experienced in the chemistry of nucleosides, has produced over the last decade the interesting results in both fields presented here.
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Affiliation(s)
- José Luis Serrano
- Departamento de Ingeniería Química y Ambiental., Área de Química Inorgánica, Universidad Politécnica de Cartagena member of European University of Technology, 30203, Cartagena, Spain
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2
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Serrano JL, Gaware S, Pérez JA, Pérez J, Lozano P, Kori S, Dandela R, Sanghvi YS, Kapdi AR. Quadrol-Pd(II) complexes: phosphine-free precatalysts for the room-temperature Suzuki-Miyaura synthesis of nucleoside analogues in aqueous media. Dalton Trans 2022; 51:2370-2384. [PMID: 35043803 DOI: 10.1039/d1dt03778a] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
Commercially available Quadrol, N,N,N',N'-tetrakis(2-hydroxypropyl)ethylenediamine (THPEN), has been used for the first time as a N^N-donor neutral hydrophilic ligand in the synthesis and characterization of new water soluble palladium(II) complexes containing chloride, phthalimidate or saccharinate as co-ligands. [PdCl2(THPEN)] (1) [Pd(phthal)2(THPEN)] (2), [Pd(sacc)2(THPEN)] (3) and the analogous complex with the closely related N,N,N',N'-tetrakis(2-hydroxyethyl)ethylenediamine (THEEN) [Pd(sacc)2(THEEN)] (4) were efficiently prepared in a one-pot reaction from [PdCl2(CH3CN)2] or Pd(OAc)2. Structural characterization of 1 and 3 by single crystal X-ray diffraction produced the first structures reported to date of palladium complexes with Quadrol. The resultant palladium complexes are highly soluble in water and were found to be effective as phosphine-free catalysts for the synthesis of functionalized nucleoside analogues under room-temperature Suzuki-Miyaura cross-coupling conditions between 5-iodo-2'-deoxyuridine (& 5-iodo-2'-deoxycytidine) with different aryl boronic acids in neat water. This is the first report of the coupling process performed on nucleosides in water at room temperature.
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Affiliation(s)
- José Luis Serrano
- Departamento de Ingeniería Química y Ambiental. Área de Química Inorgánica, Universidad Politécnica de Cartagena member of European University of Technology, 30203 Cartagena, Spain.
| | - Sujeet Gaware
- Department of Chemistry, Institute of Chemical Technology-Indian Oil Odisha Campus, IIT Kharagpur Extension Centre, Mouza Samantpuri, Bhubaneswar 751013, Odisha, India
| | - Jose Antonio Pérez
- Departamento de Ingeniería Química y Ambiental. Área de Química Inorgánica, Universidad Politécnica de Cartagena member of European University of Technology, 30203 Cartagena, Spain.
| | - José Pérez
- Departamento de Ingeniería Química y Ambiental. Área de Química Inorgánica, Universidad Politécnica de Cartagena member of European University of Technology, 30203 Cartagena, Spain.
| | - Pedro Lozano
- Departamento de Bioquímica y Biología Molecular B e Inmunología, Facultad de Química, Regional Campus of International Excellence "Campus Mare Nostrum", Universidad de Murcia, 30071 Murcia, Spain
| | - Santosh Kori
- Department of Chemistry, Institute of Chemical Technology-Indian Oil Odisha Campus, IIT Kharagpur Extension Centre, Mouza Samantpuri, Bhubaneswar 751013, Odisha, India
- Department of Chemistry, Institute of Chemical Technology, Mumbai, Nathalal Road, Matunga, Mumbai-400019, India.
| | - Rambabu Dandela
- Department of Chemistry, Institute of Chemical Technology-Indian Oil Odisha Campus, IIT Kharagpur Extension Centre, Mouza Samantpuri, Bhubaneswar 751013, Odisha, India
| | - Yogesh S Sanghvi
- Rasayan Inc. 2802, Crystal Ridge Road, Encinitas, California, 92024-6615, USA
| | - Anant R Kapdi
- Department of Chemistry, Institute of Chemical Technology, Mumbai, Nathalal Road, Matunga, Mumbai-400019, India.
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3
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Guerriero A, Peruzzini M, Gonsalvi L. Synthesis of New Ruthenium‐CAP Complexes and Use as Catalysts for Benzonitrile Hydration to Benzamide. Eur J Inorg Chem 2021. [DOI: 10.1002/ejic.202100743] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Affiliation(s)
- Antonella Guerriero
- Istituto di Chimica dei Composti OrganoMetallici (ICCOM) Consiglio Nazionale delle Ricerche (CNR) Via Madonna del Piano 10 50019 Sesto Fiorentino (Florence) Italy
| | - Maurizio Peruzzini
- Istituto di Chimica dei Composti OrganoMetallici (ICCOM) Consiglio Nazionale delle Ricerche (CNR) Via Madonna del Piano 10 50019 Sesto Fiorentino (Florence) Italy
| | - Luca Gonsalvi
- Istituto di Chimica dei Composti OrganoMetallici (ICCOM) Consiglio Nazionale delle Ricerche (CNR) Via Madonna del Piano 10 50019 Sesto Fiorentino (Florence) Italy
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4
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Selective reduction of alkynes to alkenes with hydrogen or formic acid catalyzed by cis,mer-[IrH2Cl(mtppms)3]. Inorganica Chim Acta 2021. [DOI: 10.1016/j.ica.2021.120359] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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Guerriero A, Gonsalvi L. From traditional PTA to novel CAP: A comparison between two adamantane cage-type aminophosphines. Inorganica Chim Acta 2021. [DOI: 10.1016/j.ica.2021.120251] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
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6
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Vidal A, Battistin F, Milani B, Balducci G, Alessio E. Stereoisomeric Control in [RuCl
2
(PTA)
2
(2L)] Complexes (2L=2py or bpy): From Theoretical Calculations to a 2+2 Metallacycle of Pyridylporphyrins. Eur J Inorg Chem 2021. [DOI: 10.1002/ejic.202000996] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Alessio Vidal
- Department of Chemical and Pharmaceutical Sciences University of Trieste Via L. Giorgieri 1 34127 Trieste Italy
| | - Federica Battistin
- Department of Chemical and Pharmaceutical Sciences University of Trieste Via L. Giorgieri 1 34127 Trieste Italy
- Current address: IMDEA Nanociencia Ciudad Universitaria de Cantoblanco Faraday 9 28049 Madrid Spain
| | - Barbara Milani
- Department of Chemical and Pharmaceutical Sciences University of Trieste Via L. Giorgieri 1 34127 Trieste Italy
| | - Gabriele Balducci
- Department of Chemical and Pharmaceutical Sciences University of Trieste Via L. Giorgieri 1 34127 Trieste Italy
| | - Enzo Alessio
- Department of Chemical and Pharmaceutical Sciences University of Trieste Via L. Giorgieri 1 34127 Trieste Italy
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Serrano JL, García L, Pérez J, Lozano P, Correia J, Kori S, Kapdi AR, Sanghvi YS. Imine-Palladacycles as Phosphine-Free Precatalysts for Low-Temperature Suzuki–Miyaura Synthesis of Nucleoside Analogues in Aqueous Media. Organometallics 2020. [DOI: 10.1021/acs.organomet.0c00580] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Affiliation(s)
- José Luis Serrano
- Departamento de Ingeniería Química, Área de Química Inorgánica, 30203 Regional Campus of International Excellence, Universidad Politécnica de Cartagena, 30203 Cartagena, Spain
| | - Luis García
- Departamento de Ingeniería Química, Área de Química Inorgánica, 30203 Regional Campus of International Excellence, Universidad Politécnica de Cartagena, 30203 Cartagena, Spain
| | - José Pérez
- Departamento de Ingeniería Química, Área de Química Inorgánica, 30203 Regional Campus of International Excellence, Universidad Politécnica de Cartagena, 30203 Cartagena, Spain
| | - Pedro Lozano
- Departamento de Bioquímica y Biología Molecular B e Inmunología, Facultad de Química, Regional Campus of International Excellence “Campus Mare Nostrum”, Universidad de Murcia, 30071 Murcia, Spain
| | - Jevy Correia
- Institute of Chemical Technology, Mumbai, Nathalal Road,
Matunga, Mumbai 400019, India
| | - Santosh Kori
- Institute of Chemical Technology, Mumbai, Nathalal Road,
Matunga, Mumbai 400019, India
- Department of Chemistry, Institute of Chemical Technology-Indian Oil Odisha Campus, IIT Kharagpur Extension Centre, Mouza Samantpuri, Bhubaneswar 751013, Odisha, India
| | - Anant R. Kapdi
- Institute of Chemical Technology, Mumbai, Nathalal Road,
Matunga, Mumbai 400019, India
| | - Yogesh S. Sanghvi
- Rasayan Inc., 2802 Crystal Ridge Road, Encinitas, California 92024-6615, United States
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8
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Sian L, Guerriero A, Peruzzini M, Zuccaccia C, Gonsalvi L, Macchioni A. Diffusion NMR Studies on the Self-Aggregation of Ru-Arene CAP Complexes: Evidence for the Formation of H-Bonded Dicationic Species in Acetonitrile. Organometallics 2019. [DOI: 10.1021/acs.organomet.9b00703] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Leonardo Sian
- Dipartimento di Chimica, Biologia e Biotecnologie and CIRCC, Università di Perugia, Via Elce di Sotto 8, 06123 Perugia, Italy
| | - Antonella Guerriero
- Consiglio Nazionale delle Ricerche (CNR), Istituto di Chimica dei Composti OrganoMetallici (ICCOM), Via Madonna del Piano 10, 50019 Sesto Fiorentino (Florence), Italy
| | - Maurizio Peruzzini
- Consiglio Nazionale delle Ricerche (CNR), Istituto di Chimica dei Composti OrganoMetallici (ICCOM), Via Madonna del Piano 10, 50019 Sesto Fiorentino (Florence), Italy
- Consiglio Nazionale delle Ricerche (CNR), Dipartimento di Scienze Chimiche e Tecnologia dei Materiali (DSCTM), Via dei Taurini 19, 00185 Rome, Italy
| | - Cristiano Zuccaccia
- Dipartimento di Chimica, Biologia e Biotecnologie and CIRCC, Università di Perugia, Via Elce di Sotto 8, 06123 Perugia, Italy
| | - Luca Gonsalvi
- Consiglio Nazionale delle Ricerche (CNR), Istituto di Chimica dei Composti OrganoMetallici (ICCOM), Via Madonna del Piano 10, 50019 Sesto Fiorentino (Florence), Italy
| | - Alceo Macchioni
- Dipartimento di Chimica, Biologia e Biotecnologie and CIRCC, Università di Perugia, Via Elce di Sotto 8, 06123 Perugia, Italy
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Gattaiah D, Reddy AS, Khan SA, Swamy KK. Reactions of alkynes- copper-catalyzed cyclization of functionalized alkynes with elemental sulfur/selenium to form oxathiines/oxaselenines. J Organomet Chem 2019. [DOI: 10.1016/j.jorganchem.2019.03.007] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
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10
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Ruiz‐Castañeda M, Carrión MC, Santos L, Manzano BR, Espino G, Jalón FA. A Biphasic Medium Slows Down the Transfer Hydrogenation and Allows a Selective Catalytic Deuterium Labeling of Amines from Imines Mediated by a Ru−H/D+Exchange in D2O. ChemCatChem 2018. [DOI: 10.1002/cctc.201801343] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Margarita Ruiz‐Castañeda
- Facultad de Ciencias y Tecnologías Químicas-IRICAUniversity of Castilla-La Mancha Avda. C. J. Cela, 10 Ciudad Real 13071 Spain
| | - M. Carmen Carrión
- Facultad de Ciencias y Tecnologías Químicas-IRICAUniversity of Castilla-La Mancha Avda. C. J. Cela, 10 Ciudad Real 13071 Spain
| | - Lucía Santos
- Facultad de Ciencias y Tecnologías Químicas-IRICAUniversity of Castilla-La Mancha Avda. C. J. Cela, 10 Ciudad Real 13071 Spain
| | - Blanca R. Manzano
- Facultad de Ciencias y Tecnologías Químicas-IRICAUniversity of Castilla-La Mancha Avda. C. J. Cela, 10 Ciudad Real 13071 Spain
| | - Gustavo Espino
- Departamento de Química Facultad de CienciasUniversity of Burgos Plaza Misael Bañuelos s/n Burgos 09111 Spain
| | - Félix A. Jalón
- Facultad de Ciencias y Tecnologías Químicas-IRICAUniversity of Castilla-La Mancha Avda. C. J. Cela, 10 Ciudad Real 13071 Spain
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11
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Abstract
After its discovery in the early 1980s and successful application on an industrial scale (Ruhrchemie/Rhone-Poulenc process) [...]
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12
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Fink C, Chen L, Laurenczy G. Homogeneous Catalytic Formic Acid Dehydrogenation in Aqueous Solution using Ruthenium Arene Phosphine Catalysts. Z Anorg Allg Chem 2018. [DOI: 10.1002/zaac.201800107] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Cornel Fink
- Institut des Sciences et Ingénierie Chimiques; École Polytechnique Fédérale de Lausanne (EPFL); 1015 Lausanne Switzerland
| | - Lu Chen
- Institut des Sciences et Ingénierie Chimiques; École Polytechnique Fédérale de Lausanne (EPFL); 1015 Lausanne Switzerland
| | - Gábor Laurenczy
- Institut des Sciences et Ingénierie Chimiques; École Polytechnique Fédérale de Lausanne (EPFL); 1015 Lausanne Switzerland
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