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Macleod KL, Jenkins TL, Witt MJ, Stevens JR. Rare, long-distance dispersal underpins genetic connectivity in the pink sea fan, Eunicella verrucosa. Evol Appl 2024; 17:e13649. [PMID: 38463749 PMCID: PMC10918604 DOI: 10.1111/eva.13649] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2023] [Revised: 01/02/2024] [Accepted: 01/04/2024] [Indexed: 03/12/2024] Open
Abstract
Characterizing patterns of genetic connectivity in marine species is of critical importance given the anthropogenic pressures placed on the marine environment. For sessile species, population connectivity can be shaped by many processes, such as pelagic larval duration, oceanographic boundaries and currents. This study combines restriction-site associated DNA sequencing (RADseq) and passive particle dispersal modelling to delineate patterns of population connectivity in the pink sea fan, Eunicella verrucosa, a temperate octocoral. Individuals were sampled from 20 sites covering most of the species' northeast Atlantic range, and a site in the northwest Mediterranean Sea to inform on connectivity across the Atlantic-Mediterranean transition. Using 7510 neutral SNPs, a geographic cline of genetic clusters was detected, partitioning into Ireland, Britain, France, Spain (Atlantic), and Portugal and Spain (Mediterranean). Evidence of significant inbreeding was detected at all sites, a finding not detected in a previous study of this species based on microsatellite loci. Genetic connectivity was characterized by an isolation by distance pattern (IBD) (r 2 = 0.78, p < 0.001), which persisted across the Mediterranean-Atlantic boundary. In contrast, exploration of ancestral population assignment using the program ADMIXTURE indicated genetic partitioning across the Bay of Biscay, which we suggest represents a natural break in the species' range, possibly linked to a lack of suitable habitat. As the pelagic larval duration (PLD) is unknown, passive particle dispersal simulations were run for 14 and 21 days. For both modelled PLDs, inter-annual variations in particle trajectories suggested that in a long-lived, sessile species, range-wide IBD is driven by rare, longer dispersal events that act to maintain gene flow. These results suggest that oceanographic patterns may facilitate range-wide stepping-stone genetic connectivity in E. verrucosa and highlight that both oceanography and natural breaks in a species' range should be considered in the designation of ecologically coherent MPA networks.
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Affiliation(s)
- Kirsty L. Macleod
- Department of Biosciences, Faculty of Health and Life SciencesUniversity of ExeterExeterUK
| | - Tom L. Jenkins
- Department of Biosciences, Faculty of Health and Life SciencesUniversity of ExeterExeterUK
| | - Matthew J. Witt
- Department of Biosciences, Faculty of Health and Life SciencesUniversity of ExeterExeterUK
| | - Jamie R. Stevens
- Department of Biosciences, Faculty of Health and Life SciencesUniversity of ExeterExeterUK
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2
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Chimienti G, Maiorca M, Digenis M, Poursanidis D. Conservation status of upper-mesophotic octocoral habitats at Sporades Archipelago (Aegean Sea). MARINE POLLUTION BULLETIN 2023; 190:114868. [PMID: 36996612 DOI: 10.1016/j.marpolbul.2023.114868] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/13/2023] [Revised: 03/18/2023] [Accepted: 03/20/2023] [Indexed: 06/19/2023]
Abstract
Octocoral forests created by the yellow sea fan Eunicella cavolini and the red sea fan Paramuricea clavata were studied at the National Marine Park of Alonissos Northern Sporades (Aegean Sea, Greece), between 30 and 45 m depth, in order to assess their conservation status and the occurrence of both natural and anthropogenic stressors. The area was characterized by rich and dense coral forests, with densities up to 55.2 colonies m-2 for E. cavolini and 28.0 colonies m-2 for P. clavata. The coral population showed signs of stress, although mortality was low. A combination of stressors linked to global warming and fishing impacts, including macroalgal epibiosis, tip necrosis, increasing coral feeders, and abandoned fishing gears, could impair the status of these habitats in the near future. Although the effects of climate change are global, local conservation actions may reduce direct anthropogenic impacts and enhance habitats' resilience.
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Affiliation(s)
- Giovanni Chimienti
- Red Sea Research Center, Division of Biological and Environmental Science and Engineering, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia; CoNISMa, Rome, Italy.
| | - Michela Maiorca
- Department of Biology, University of Bari Aldo Moro, Bari, Italy
| | - Markos Digenis
- Department of Environment, Faculty of Environment, Ionian University, Zakynthos, Greece
| | - Dimitris Poursanidis
- terraSolutions marine environment research, Heraklion, Crete, Greece; Foundation for Research and Technology-Hellas (FORTH), Institute of Applied and Computational Mathematics, Remote Sensing lab, Heraklion, Greece
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3
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Jenkins TL, Stevens JR. Predicting habitat suitability and range shifts under projected climate change for two octocorals in the north-east Atlantic. PeerJ 2022; 10:e13509. [PMID: 35651748 PMCID: PMC9150690 DOI: 10.7717/peerj.13509] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2021] [Accepted: 05/06/2022] [Indexed: 01/17/2023] Open
Abstract
Species distribution models have become a valuable tool to predict the distribution of species across geographic space and time. In this study, maximum entropy models were constructed for two temperate shallow-water octocoral species, the pink sea fan (Eunicella verrucosa) and dead man's fingers (Alcyonium digitatum), to investigate and compare habitat suitability. The study area covered the north-east Atlantic from the Bay of Biscay to the British Isles and southern Norway; this area includes both the northern range of E. verrucosa and the middle-northern range of A. digitatum. The optimal models for each species showed that, overall, slope, temperature at the seafloor and wave orbital velocity were important predictors of distribution in both species. Predictions of habitat suitability showed areas of present-day (1951-2000) suitable habitat where colonies have not yet been observed, particularly for E. verrucosa, where areas beyond its known northern range limit were identified. Moreover, analysis with future layers (2081-2100) of temperature and oxygen concentration predicted a sizable increase in habitat suitability for E. verrucosa beyond these current range limits under the Representative Concentration Pathway 8.5 scenario. This suggests that projected climate change may induce a potential range expansion northward for E. verrucosa, although successful colonisation would also be conditional on other factors such as dispersal and interspecific competition. For A. digitatum, this scenario of projected climate change may result in more suitable habitat in higher latitudes, but, as with E. verrucosa, there is a degree of uncertainty in the model predictions. Importantly, the results from this study highlight present-day areas of high habitat suitability which, if combined with knowledge on population density, could be used to identify priority areas to enhance protection and ensure the long-term survival of these octocoral species in the region.
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Drawing the borders of the mesophotic zone of the Mediterranean Sea using satellite data. Sci Rep 2022; 12:5585. [PMID: 35379864 PMCID: PMC8979996 DOI: 10.1038/s41598-022-09413-4] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2021] [Accepted: 02/08/2022] [Indexed: 11/09/2022] Open
Abstract
The 30–150 m bathymetric range is commonly adopted in the literature to constrain the mesophotic zone. However, such depth interval varies depending on sunlight penetration, which is primarily a function of solar radiation incidence and water clarity. This is especially obvious in the Mediterranean Sea with its peculiar biophysical properties. Integrating information on light regime in the estimation of the bathymetric range of the mesophotic zone would provide a more robust definition, orienting conservation actions targeting its ecosystems. We present a first assessment of the spatial and vertical extension of the mesophotic zone in the Mediterranean Sea based upon light penetration, comparing our prediction with literature data. Our study also represents a baseline to monitor future variations in the bathymetric interval associated with the mesophotic zone in the Mediterranean Sea in relation to global changes.
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A Newly Discovered Forest of the Whip Coral Viminella flagellum (Anthozoa, Alcyonacea) in the Mediterranean Sea: A Non-Invasive Method to Assess Its Population Structure. BIOLOGY 2021; 11:biology11010039. [PMID: 35053037 PMCID: PMC8773211 DOI: 10.3390/biology11010039] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/23/2021] [Revised: 12/22/2021] [Accepted: 12/22/2021] [Indexed: 12/04/2022]
Abstract
Simple Summary Some corals belonging to the orders Alcyonacea and Antipatharia have elongated, unbranched shapes, and are generally addressed as sea whips. The octocorals Viminella flagellum are the main sea whip species inhabiting the Mediterranean Sea, where they can form large colony aggregations known as coral forests. These habitats are of great conservation importance; they provide a suite of ecosystem goods and services, and their monitoring is essential to plan appropriate conservation strategies. One of the most important indicators on the status of a coral forest is its population structure, such as the frequency of different size classes within the coral population. This is very difficult to assess in sea whips because of the length and high flexibility. Here, we report on the findings of a newly discovered, monospecific forest of V. flagellum in Aeolian Archipelago (Mediterranean Sea), and we present a new method to study its population structure using video analysis. The results of the survey indicate that the Aeolian coral population was in good condition, without significant anthropogenic impacts. The new method presented here proved to be an effective and promising tool for the monitoring of this vulnerable marine ecosystem. It can be applied to every known population of V. flagellum as well as adapted to other sea-whip species. Abstract Coral forests are vulnerable marine ecosystems formed by arborescent corals (e.g., Anthozoa of the orders Alcyonacea and Antipatharia). The population structure of the habitat-forming corals can inform on the status of the habitat, representing an essential aspect to monitor. Most Mediterranean corals live in the mesophotic and aphotic zones, and their population structures can be assessed by analyzing images collected by underwater vehicles. This is still not possible in whip-like corals, whose colony lengths and flexibilities impede the taking of direct length measurements from images. This study reports on the occurrence of a monospecific forest, of the whip coral Viminella flagellum in the Aeolian Archipelago (Southern Tyrrhenian Sea; 149 m depth), and the assessment of its population structure through an ad-hoc, non-invasive method to estimate a colony height based on its width. The forest of V. flagellum showed a mean density of 19.4 ± 0.2 colonies m−2 (up to 44.8 colonies m−2) and no signs of anthropogenic impacts. The population was dominated by young colonies, with the presence of large adults and active recruitment. The new model proved to be effective for non-invasive monitoring of this near threatened species, representing a needed step towards appropriate conservation actions.
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Chimienti G, De Padova D, Adamo M, Mossa M, Bottalico A, Lisco A, Ungaro N, Mastrototaro F. Effects of global warming on Mediterranean coral forests. Sci Rep 2021; 11:20703. [PMID: 34667231 PMCID: PMC8526741 DOI: 10.1038/s41598-021-00162-4] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2021] [Accepted: 10/05/2021] [Indexed: 11/09/2022] Open
Abstract
The effects of global warming have been addressed on coral reefs in tropical areas, while it is still unclear how coral forests are reacting, particularly at temperate latitudes. Here we show how mesophotic coral forests are affected by global warming in the Mediterranean Sea. We highlight how the current warming trend is causing the lowering of the thermocline and it is enhancing mucilaginous blooms. These stressors are facilitating a massive macroalgal epibiosis on living corals, here reported for the first time from different areas in the Western and Central Mediterranean Sea. We provide a focus of this phenomenon at Tremiti Islands Marine Protected Area (Adriatic Sea), were the density of the endemic red gorgonian Paramuricea clavata decreased of up to 47% in 5 years, while up to the 96% of the living corals showed signs of stress and macroalgal epibiosis. Only populations deeper than 60 m depth were not touched by this emerging phenomenon. Spot observations performed at Tuscan Archipelago and Tavolara Marine Protected Area (Tyrrhenian Sea) suggest that this this combination of stressors is likely widespread at basin scale.
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Affiliation(s)
- Giovanni Chimienti
- Department of Biology and CoNISMa LRU, University of Bari Aldo Moro, Via Orabona 4, 70125, Bari, Italy. .,CoNISMa, Rome, Italy.
| | - Diana De Padova
- CoNISMa, Rome, Italy.,DICATECh, Polytechnic University of Bari, Bari, Italy
| | - Maria Adamo
- Institute of Atmospheric Pollution Research (IIA), National Research Council (CNR), Bari, Italy
| | - Michele Mossa
- CoNISMa, Rome, Italy.,DICATECh, Polytechnic University of Bari, Bari, Italy
| | - Antonella Bottalico
- Department of Biology and CoNISMa LRU, University of Bari Aldo Moro, Via Orabona 4, 70125, Bari, Italy
| | - Anna Lisco
- Department of Biology and CoNISMa LRU, University of Bari Aldo Moro, Via Orabona 4, 70125, Bari, Italy
| | - Nicola Ungaro
- Apulian Regional Agency for the Environmental Prevention and Protection, Bari, Italy
| | - Francesco Mastrototaro
- Department of Biology and CoNISMa LRU, University of Bari Aldo Moro, Via Orabona 4, 70125, Bari, Italy.,CoNISMa, Rome, Italy
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Size/Age Models for Monitoring of the Pink Sea Fan Eunicella verrucosa (Cnidaria: Alcyonacea) and a Case Study Application. JOURNAL OF MARINE SCIENCE AND ENGINEERING 2020. [DOI: 10.3390/jmse8110951] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
The pink sea fan Eunicella verrucosa is a habitat-forming octocoral living in the East Atlantic and in the Mediterranean Sea where, under proper circumstances, it can form large populations known as coral forests. Although these coral forests represent vulnerable marine ecosystems of great importance, these habitats are still poorly known, and their monitoring is almost non-existent to date. For this reason, we compared two different models to infer the age of E. verrucosa based on nondestructive measurements of the colonies’ size, in order to highlight strengths and weaknesses of the existing tools for a potential application in long-term monitoring. We also applied the two models on a case-study population recently found in the northwest Mediterranean Sea. Our results showed which model was more reliable from a biological point of view, considering both its structure and the results obtained on the case study. However, this model uses solely the height of the colonies as proxy to infer the age, while the total branch fan surface area could represent a more appropriate biometric parameter to monitor the size and the growth of E. verrucosa.
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Picardi G, Borrelli C, Sarti A, Chimienti G, Calisti M. A Minimal Metric for the Characterization of Acoustic Noise Emitted by Underwater Vehicles. SENSORS (BASEL, SWITZERLAND) 2020; 20:E6644. [PMID: 33233543 PMCID: PMC7699715 DOI: 10.3390/s20226644] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/12/2020] [Revised: 11/11/2020] [Accepted: 11/18/2020] [Indexed: 11/28/2022]
Abstract
Underwater robots emit sound during operations which can deteriorate the quality of acoustic data recorded by on-board sensors or disturb marine fauna during in vivo observations. Notwithstanding this, there have only been a few attempts at characterizing the acoustic emissions of underwater robots in the literature, and the datasheets of commercially available devices do not report information on this topic. This work has a twofold goal. First, we identified a setup consisting of a camera directly mounted on the robot structure to acquire the acoustic data and two indicators (i.e., spectral roll-off point and noise introduced to the environment) to provide a simple and intuitive characterization of the acoustic emissions of underwater robots carrying out specific maneuvers in specific environments. Second, we performed the proposed analysis on three underwater robots belonging to the classes of remotely operated vehicles and underwater legged robots. Our results showed how the legged device produced a clearly different signature compared to remotely operated vehicles which can be an advantage in operations that require low acoustic disturbance. Finally, we argue that the proposed indicators, obtained through a standardized procedure, may be a useful addition to datasheets of existing underwater robots.
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Affiliation(s)
- Giacomo Picardi
- The BioRobotics Institute, Scuola Superiore Sant’Anna, 56127 Pisa, Italy;
- Department of Excellence in Robotics & AI, Scuola Superiore Sant’Anna, 56127 Pisa, Italy
| | - Clara Borrelli
- Dipartimento di Elettronica, Informazione e Bioingegneria, Politecnico di Milano, 20133 Milano, Italy; (C.B.); (A.S.)
| | - Augusto Sarti
- Dipartimento di Elettronica, Informazione e Bioingegneria, Politecnico di Milano, 20133 Milano, Italy; (C.B.); (A.S.)
| | - Giovanni Chimienti
- Department of Biology and CoNISMa LRU, University of Bari Aldo Moro, 70125 Bari, Italy;
| | - Marcello Calisti
- The BioRobotics Institute, Scuola Superiore Sant’Anna, 56127 Pisa, Italy;
- Department of Excellence in Robotics & AI, Scuola Superiore Sant’Anna, 56127 Pisa, Italy
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Rhodolith Beds Heterogeneity along the Apulian Continental Shelf (Mediterranean Sea). JOURNAL OF MARINE SCIENCE AND ENGINEERING 2020. [DOI: 10.3390/jmse8100813] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Rhodolith beds represent a key habitat worldwide, from tropical to polar ecosystems. Despite this habitat is considered a hotspot of biodiversity, providing a suite of ecosystem goods and services, still scarce quantitative information is available thus far about rhodolith beds occurrence and ecological role, especially in the Mediterranean Sea. This study reports the composition and patterns of distribution of rhodolith assemblages found in four study areas along ca. 860 km of coast in the Central Mediterranean Sea. These rhodolith beds were studied for the first time and significant differences at all spatial scales have been highlighted, documenting the high variability of this habitat. Rhodolith species composition, morphology and distribution have been discussed considering the potential role of environmental factors in driving these patterns. The need for improving their protection is discussed to complement present conservation and management initiatives, particularly in the frame of the EU Marine Strategy Framework Directive.
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Mastrototaro F, Aguilar R, Alvarez H, Blanco J, García S, Montesanto F, Perry AL, Chimienti G. Mesophotic rocks dominated by Diazona violacea: a Mediterranean codified habitat. THE EUROPEAN ZOOLOGICAL JOURNAL 2020. [DOI: 10.1080/24750263.2020.1837972] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022] Open
Affiliation(s)
- F. Mastrototaro
- Department of Biology, University of Bari, Bari, Italy
- CoNISMa, Roma, Italy
| | | | | | | | | | - F. Montesanto
- Department of Biology, University of Bari, Bari, Italy
- CoNISMa, Roma, Italy
| | | | - G. Chimienti
- Department of Biology, University of Bari, Bari, Italy
- CoNISMa, Roma, Italy
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