Narrow Band Active Contour Attention Model for Medical Segmentation

CarcassFormer: an end-to-end transformer-based framework for simultaneous localization, segmentation and classification of poultry carcass defect

In the food industry, assessing the quality of poultry carcasses during processing is a crucial step. This study proposes an effective approach for automating the assessment of carcass quality without requiring skilled labor or inspector involvement. The proposed system is based on machine learning (ML) and computer vision (CV) techniques, enabling automated defect detection and carcass quality assessment. To this end, an end-to-end framework called CarcassFormer is introduced. It is built upon a Transformer-based architecture designed to effectively extract visual representations while simultaneously detecting, segmenting, and classifying poultry carcass defects. Our proposed framework is capable of analyzing imperfections resulting from production and transport welfare issues, as well as processing plant stunner, scalder, picker, and other equipment malfunctions. To benchmark the framework, a dataset of 7,321 images was initially acquired, which contained both single and multiple carcasses per image. In this study, the performance of the CarcassFormer system is compared with other state-of-the-art (SOTA) approaches for both classification, detection, and segmentation tasks. Through extensive quantitative experiments, our framework consistently outperforms existing methods, demonstrating re- markable improvements across various evaluation metrics such as AP, AP@50, and AP@75. Furthermore, the qualitative results highlight the strengths of CarcassFormer in capturing fine details, including feathers, and accurately localizing and segmenting carcasses with high precision. To facilitate further research and collaboration, the source code and trained models will be made publicly available upon acceptance.

Narrow-band loss - a novel loss function focused on target boundary

Loss functions widely employed in medical image segmentation, e.g., Dice or Generalized Dice, treat each pixel of segmentation target(s) equally. These region-based loss functions are concerned with the overall segmentation accuracy. However, in clinical applications, the focus of attention is often the boundary area of the target organ(s). Existing region-based loss functions lack attention to boundary areas. We designed narrow-band loss, which computes the integration of the predicted probability within the narrow-band around the target boundary. From the aspect of how it's derived, Narrow-band loss belongs to the region-based loss function. The difference from normal region-based loss is that Narrow-band loss calculates based on the degree of coincidence of the region surrounding the organ boundary. The advantage is that narrow-band loss can guide networks to focus on the target's boundary and neighborhood. We also generalize narrow-band loss to multi-target segmentation. We tested narrow-band loss on two datasets of different parts of the human body: the brain dataset with 416 cases, each case with 35 labels, and the abdominal dataset with 50 cases, each case with 12 labels. Narrow-band loss has improved greatly in hd95 metric and dice metric compared with baseline, which is dice loss only.

MRI-based deep learning model predicts distant metastasis and chemotherapy benefit in stage II nasopharyngeal carcinoma

Chemotherapy remains controversial for stage II nasopharyngeal carcinoma because of its considerable prognostic heterogeneity. We aimed to develop an MRI-based deep learning model for predicting distant metastasis and assessing chemotherapy efficacy in stage II nasopharyngeal carcinoma. This multicenter retrospective study enrolled 1072 patients from three Chinese centers for training (Center 1, n = 575) and external validation (Centers 2 and 3, n = 497). The deep learning model significantly predicted the risk of distant metastases for stage II nasopharyngeal carcinoma and was validated in the external validation cohort. In addition, the deep learning model outperformed the clinical and radiomics models in terms of predictive performance. Furthermore, the deep learning model facilitates the identification of high-risk patients who could benefit from chemotherapy, providing useful additional information for individualized treatment decisions.

Performance and Robustness of Regional Image Segmentation Driven by Selected Evolutionary and Genetic Algorithms: Study on MR Articular Cartilage Images

The analysis and segmentation of articular cartilage magnetic resonance (MR) images belongs to one of the most commonly routine tasks in diagnostics of the musculoskeletal system of the knee area. Conventional regional segmentation methods, which are based either on the histogram partitioning (e.g., Otsu method) or clustering methods (e.g., K-means), have been frequently used for the task of regional segmentation. Such methods are well known as fast and well working in the environment, where cartilage image features are reliably recognizable. The well-known fact is that the performance of these methods is prone to the image noise and artefacts. In this context, regional segmentation strategies, driven by either genetic algorithms or selected evolutionary computing strategies, have the potential to overcome these traditional methods such as Otsu thresholding or K-means in the context of their performance. These optimization strategies consecutively generate a pyramid of a possible set of histogram thresholds, of which the quality is evaluated by using the fitness function based on Kapur's entropy maximization to find the most optimal combination of thresholds for articular cartilage segmentation. On the other hand, such optimization strategies are often computationally demanding, which is a limitation of using such methods for a stack of MR images. In this study, we publish a comprehensive analysis of the optimization methods based on fuzzy soft segmentation, driven by artificial bee colony (ABC), particle swarm optimization (PSO), Darwinian particle swarm optimization (DPSO), and a genetic algorithm for an optimal thresholding selection against the routine segmentations Otsu and K-means for analysis and the features extraction of articular cartilage from MR images. This study objectively analyzes the performance of the segmentation strategies upon variable noise with dynamic intensities to report a segmentation's robustness in various image conditions for a various number of segmentation classes (4, 7, and 10), cartilage features (area, perimeter, and skeleton) extraction preciseness against the routine segmentation strategies, and lastly the computing time, which represents an important factor of segmentation performance. We use the same settings on individual optimization strategies: 100 iterations and 50 population. This study suggests that the combination of fuzzy thresholding with an ABC algorithm gives the best performance in the comparison with other methods as from the view of the segmentation influence of additive dynamic noise influence, also for cartilage features extraction. On the other hand, using genetic algorithms for cartilage segmentation in some cases does not give a good performance. In most cases, the analyzed optimization strategies significantly overcome the routine segmentation methods except for the computing time, which is normally lower for the routine algorithms. We also publish statistical tests of significance, showing differences in the performance of individual optimization strategies against Otsu and K-means method. Lastly, as a part of this study, we publish a software environment, integrating all the methods from this study.

AAU-Net: Attention-Based Asymmetric U-Net for Subject-Sensitive Hashing of Remote Sensing Images

The prerequisite for the use of remote sensing images is that their security must be guaranteed. As a special subset of perceptual hashing, subject-sensitive hashing overcomes the shortcomings of the existing perceptual hashing that cannot distinguish between “subject-related tampering” and “subject-unrelated tampering” of remote sensing images. However, the existing subject-sensitive hashing still has a large deficiency in robustness. In this paper, we propose a novel attention-based asymmetric U-Net (AAU-Net) for the subject-sensitive hashing of remote sensing (RS) images. Our AAU-Net demonstrates obvious asymmetric structure characteristics, which is important to improve the robustness of features by combining the attention mechanism and the characteristics of subject-sensitive hashing. On the basis of AAU-Net, a subject-sensitive hashing algorithm is developed to integrate the features of various bands of RS images. Our experimental results show that our AAU-Net-based subject-sensitive hashing algorithm is more robust than the existing deep learning models such as Attention U-Net and MUM-Net, and its tampering sensitivity remains at the same level as that of Attention U-Net and MUM-Net.