Deep Active Learning for Automatic Mitotic Cell Detection on HEp-2 Specimen Medical Images

Transferable deep learning with coati optimization algorithm based mitotic nuclei segmentation and classification model

Image processing and pattern recognition methods have recently been extensively implemented in histopathological images (HIs). These computer-aided techniques are aimed at detecting the attentive biological markers for assisting the final cancer grading. Mitotic count (MC) is a significant cancer detection and grading parameter. Conventionally, a pathologist examines the biopsy image physically by employing higher-power microscopy. The MC cells have been marked physically at every analysis, and total MC must be utilized as a major aspect for the cancer ranking and considered as the initiative of cancers. Numerous pattern recognition algorithms for cell-sized objects in HIs depend upon segmentation to assess features. The correct description of the segmentation has been difficult, and feature outcomes can be highly complex to the segmentation. The MC cells are an essential element in many cancer grading methods. Extraction of the MC cell from the HI is a highly challenging assignment. This manuscript proposes the Coati Optimization Algorithm with Deep Learning-Driven Mitotic Nuclei Segmentation and Classification (COADL-MNSC) technique. The major aim of the COADL-MNSC technique is to utilize the DL model to segment and classify the mitotic nuclei (MN). In the preliminary stage, the COADL-MNSC approach implements median filtering (MF) for pre-processing. Besides, the COADL-MNSC approach utilizes the Hybrid Attention Fusion U-Net (HAU-UNet) model to segment the MN. Moreover, the capsule network (CapsNet) model is employed for the feature extraction method, and its hyperparameters are adjusted by utilizing the COA model. At last, the classification procedure is performed using the bidirectional long short-term memory (BiLSTM) model. Extensive simulations are performed under the MN image dataset to exhibit the excellent performance of the COADL-MNSC methodology. The experimental validation of the COADL-MNSC methodology portrayed a superior accuracy value of 98.89% over existing techniques under diverse measures.

Recognition of rare antinuclear antibody patterns based on a novel attention-based enhancement framework

Rare antinuclear antibody (ANA) pattern recognition has been a widely applied technology for routine ANA screening in clinical laboratories. In recent years, the application of deep learning methods in recognizing ANA patterns has witnessed remarkable advancements. However, the majority of studies in this field have primarily focused on the classification of the most common ANA patterns, while another subset has concentrated on the detection of mitotic metaphase cells. To date, no prior research has been specifically dedicated to the identification of rare ANA patterns. In the present paper, we introduce a novel attention-based enhancement framework, which was designed for the recognition of rare ANA patterns in ANA-indirect immunofluorescence images. More specifically, we selected the algorithm with the best performance as our target detection network by conducting comparative experiments. We then further developed and enhanced the chosen algorithm through a series of optimizations. Then, attention mechanism was introduced to facilitate neural networks in expediting the learning process, extracting more essential and distinctive features for the target features that belong to the specific patterns. The proposed approach has helped to obtained high precision rate of 86.40%, 82.75% recall, 84.24% F1 score and 84.64% mean average precision for a 9-category rare ANA pattern detection task on our dataset. Finally, we evaluated the potential of the model as medical technologist assistant and observed that the technologist's performance improved after referring to the results of the model prediction. These promising results highlighted its potential as an efficient and reliable tool to assist medical technologists in their clinical practice.

Automatic Classification of Antinuclear Antibody Patterns With Machine Learning

Antinuclear antibodies (ANA) are important diagnostic markers in many autoimmune rheumatological diseases. The indirect immunofluorescence assay applied on human epithelial cells generates images that are used in the detection of ANA. The classification of these images for different ANA patterns requires human experts. It is time-consuming and subjective as different experts may label the same image differently. Therefore, there is an interest in machine learning-based automatic classification of ANA patterns. In our study, to build an application for the automatic classification of ANA patterns, we construct a dataset and learn a deep neural network with a transfer learning approach. We show that even in the existence of a limited number of labeled data, high accuracies can be achieved on the unseen test samples. Our study shows that deep learning-based software can be built for this task to save expert time.