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Ille N, Nakao Y, Yano S, Taura T, Ebert A, Bornfleth H, Asagi S, Kozawa K, Itabashi I, Sato T, Sakuraba R, Tsuda R, Kakisaka Y, Jin K, Nakasato N. Ongoing EEG artifact correction using blind source separation. Clin Neurophysiol 2024; 158:149-158. [PMID: 38219404 DOI: 10.1016/j.clinph.2023.12.133] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2023] [Revised: 11/23/2023] [Accepted: 12/15/2023] [Indexed: 01/16/2024]
Abstract
OBJECTIVE Analysis of the electroencephalogram (EEG) for epileptic spike and seizure detection or brain-computer interfaces can be severely hampered by the presence of artifacts. The aim of this study is to describe and evaluate a fast automatic algorithm for ongoing correction of artifacts in continuous EEG recordings, which can be applied offline and online. METHODS The automatic algorithm for ongoing correction of artifacts is based on fast blind source separation. It uses a sliding window technique with overlapping epochs and features in the spatial, temporal and frequency domain to detect and correct ocular, cardiac, muscle and powerline artifacts. RESULTS The approach was validated in an independent evaluation study on publicly available continuous EEG data with 2035 marked artifacts. Validation confirmed that 88% of the artifacts could be removed successfully (ocular: 81%, cardiac: 84%, muscle: 98%, powerline: 100%). It outperformed state-of-the-art algorithms both in terms of artifact reduction rates and computation time. CONCLUSIONS Fast ongoing artifact correction successfully removed a good proportion of artifacts, while preserving most of the EEG signals. SIGNIFICANCE The presented algorithm may be useful for ongoing correction of artifacts, e.g., in online systems for epileptic spike and seizure detection or brain-computer interfaces.
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Affiliation(s)
| | | | | | | | | | | | - Suguru Asagi
- Clinical Physiological Center, Tohoku University Hospital, Sendai, Japan
| | - Kanoko Kozawa
- Clinical Physiological Center, Tohoku University Hospital, Sendai, Japan
| | - Izumi Itabashi
- Clinical Physiological Center, Tohoku University Hospital, Sendai, Japan
| | - Takafumi Sato
- Clinical Physiological Center, Tohoku University Hospital, Sendai, Japan
| | - Rie Sakuraba
- Clinical Physiological Center, Tohoku University Hospital, Sendai, Japan
| | - Rie Tsuda
- Clinical Physiological Center, Tohoku University Hospital, Sendai, Japan
| | - Yosuke Kakisaka
- Department of Epileptology, Tohoku University Graduate School of Medicine, Sendai, Japan
| | - Kazutaka Jin
- Department of Epileptology, Tohoku University Graduate School of Medicine, Sendai, Japan
| | - Nobukazu Nakasato
- Department of Epileptology, Tohoku University Graduate School of Medicine, Sendai, Japan
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Zhao L, Zhang Y, Yu X, Wu H, Wang L, Li F, Duan M, Lai Y, Liu T, Dong L, Yao D. Quantitative signal quality assessment for large-scale continuous scalp electroencephalography from a big data perspective. Physiol Meas 2023; 44. [PMID: 35952665 DOI: 10.1088/1361-6579/ac890d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2021] [Accepted: 08/11/2022] [Indexed: 11/12/2022]
Abstract
Objective. Despite electroencephalography (EEG) being a widely used neuroimaging technique with an excellent temporal resolution, in practice, the signals are heavily contaminated by artifacts masking responses of interest in an experiment. It is thus essential to guarantee a prompt and effective detection of artifacts that provides quantitative quality assessment (QA) on raw EEG data. This type of pipeline is crucial for large-scale EEG studies. However, current EEG QA studies are still limited.Approach. In this study, combined from a big data perspective, we therefore describe a quantitative signal quality assessment pipeline, a stable and general threshold-based QA pipeline that automatically integrates artifact detection and new QA measures to assess continuous resting-state raw EEG data. One simulation dataset and two resting-state EEG datasets from 42 healthy subjects and 983 clinical patients were utilized to calibrate the QA pipeline.Main Results. The results demonstrate that (1) the QA indices selected are sensitive: they almost strictly and linearly decrease as the noise level increases; (2) stable, replicable QA thresholds are valid for other experimental and clinical EEG datasets; and (3) use of the QA pipeline on these datasets reveals that high-frequency noises are the most common noises in EEG practice. The QA pipeline is also deployed in the WeBrain cloud platform (https://webrain.uestc.edu.cn/, the Chinese EEG Brain Consortium portal).Significance. These findings suggest that the proposed QA pipeline may be a stable and promising approach for quantitative EEG signal quality assessment in large-scale EEG studies.
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Affiliation(s)
- Lingling Zhao
- The Clinical Hospital of Chengdu Brain Science Institute, MOE Key Lab for Neuroinformation, University of Electronic Science and Technology of China, Chengdu, People's Republic of China.,School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, People's Republic of China
| | - Yufan Zhang
- The Clinical Hospital of Chengdu Brain Science Institute, MOE Key Lab for Neuroinformation, University of Electronic Science and Technology of China, Chengdu, People's Republic of China.,School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, People's Republic of China
| | - Xue Yu
- The Clinical Hospital of Chengdu Brain Science Institute, MOE Key Lab for Neuroinformation, University of Electronic Science and Technology of China, Chengdu, People's Republic of China.,School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, People's Republic of China
| | - Hanxi Wu
- The Clinical Hospital of Chengdu Brain Science Institute, MOE Key Lab for Neuroinformation, University of Electronic Science and Technology of China, Chengdu, People's Republic of China
| | - Lei Wang
- The Clinical Hospital of Chengdu Brain Science Institute, MOE Key Lab for Neuroinformation, University of Electronic Science and Technology of China, Chengdu, People's Republic of China
| | - Fali Li
- The Clinical Hospital of Chengdu Brain Science Institute, MOE Key Lab for Neuroinformation, University of Electronic Science and Technology of China, Chengdu, People's Republic of China.,School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, People's Republic of China.,Research Unit of NeuroInformation, Chinese Academy of Medical Sciences, 2019RU035, Chengdu, People's Republic of China
| | - Mingjun Duan
- The Clinical Hospital of Chengdu Brain Science Institute, MOE Key Lab for Neuroinformation, University of Electronic Science and Technology of China, Chengdu, People's Republic of China.,Sichuan Institute for Brain Science and Brain-Inspired Intelligence, Chengdu 611731, People's Republic of China
| | - Yongxiu Lai
- The Clinical Hospital of Chengdu Brain Science Institute, MOE Key Lab for Neuroinformation, University of Electronic Science and Technology of China, Chengdu, People's Republic of China.,School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, People's Republic of China.,Research Unit of NeuroInformation, Chinese Academy of Medical Sciences, 2019RU035, Chengdu, People's Republic of China
| | - Tiejun Liu
- The Clinical Hospital of Chengdu Brain Science Institute, MOE Key Lab for Neuroinformation, University of Electronic Science and Technology of China, Chengdu, People's Republic of China.,School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, People's Republic of China.,Research Unit of NeuroInformation, Chinese Academy of Medical Sciences, 2019RU035, Chengdu, People's Republic of China.,Sichuan Institute for Brain Science and Brain-Inspired Intelligence, Chengdu 611731, People's Republic of China
| | - Li Dong
- The Clinical Hospital of Chengdu Brain Science Institute, MOE Key Lab for Neuroinformation, University of Electronic Science and Technology of China, Chengdu, People's Republic of China.,School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, People's Republic of China.,Research Unit of NeuroInformation, Chinese Academy of Medical Sciences, 2019RU035, Chengdu, People's Republic of China.,Sichuan Institute for Brain Science and Brain-Inspired Intelligence, Chengdu 611731, People's Republic of China
| | - Dezhong Yao
- The Clinical Hospital of Chengdu Brain Science Institute, MOE Key Lab for Neuroinformation, University of Electronic Science and Technology of China, Chengdu, People's Republic of China.,School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, People's Republic of China.,Research Unit of NeuroInformation, Chinese Academy of Medical Sciences, 2019RU035, Chengdu, People's Republic of China.,Sichuan Institute for Brain Science and Brain-Inspired Intelligence, Chengdu 611731, People's Republic of China
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Emotional State Classification from MUSIC-Based Features of Multichannel EEG Signals. BIOENGINEERING (BASEL, SWITZERLAND) 2023; 10:bioengineering10010099. [PMID: 36671671 PMCID: PMC9854769 DOI: 10.3390/bioengineering10010099] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/29/2022] [Revised: 01/04/2023] [Accepted: 01/06/2023] [Indexed: 01/14/2023]
Abstract
Electroencephalogram (EEG)-based emotion recognition is a computationally challenging issue in the field of medical data science that has interesting applications in cognitive state disclosure. Generally, EEG signals are classified from frequency-based features that are often extracted using non-parametric models such as Welch's power spectral density (PSD). These non-parametric methods are not computationally sound due to having complexity and extended run time. The main purpose of this work is to apply the multiple signal classification (MUSIC) model, a parametric-based frequency-spectrum-estimation technique to extract features from multichannel EEG signals for emotional state classification from the SEED dataset. The main challenge of using MUSIC in EEG feature extraction is to tune its parameters for getting the discriminative features from different classes, which is a significant contribution of this work. Another contribution is to show some flaws of this dataset for the first time that contributed to achieving high classification accuracy in previous research works. This work used MUSIC features to classify three emotional states and achieve 97% accuracy on average using an artificial neural network. The proposed MUSIC model optimizes a 95-96% run time compared with the conventional classical non-parametric technique (Welch's PSD) for feature extraction.
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SSA with CWT and k-Means for Eye-Blink Artifact Removal from Single-Channel EEG Signals. SENSORS 2022; 22:s22030931. [PMID: 35161676 PMCID: PMC8838657 DOI: 10.3390/s22030931] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/21/2021] [Revised: 01/15/2022] [Accepted: 01/21/2022] [Indexed: 12/20/2022]
Abstract
Recently, the use of portable electroencephalogram (EEG) devices to record brain signals in both health care monitoring and in other applications, such as fatigue detection in drivers, has been increased due to its low cost and ease of use. However, the measured EEG signals always mix with the electrooculogram (EOG), which are results due to eyelid blinking or eye movements. The eye-blinking/movement is an uncontrollable activity that results in a high-amplitude slow-time varying component that is mixed in the measured EEG signal. The presence of these artifacts misled our understanding of the underlying brain state. As the portable EEG devices comprise few EEG channels or sometimes a single EEG channel, classical artifact removal techniques such as blind source separation methods cannot be used to remove these artifacts from a single-channel EEG signal. Hence, there is a demand for the development of new single-channel-based artifact removal techniques. Singular spectrum analysis (SSA) has been widely used as a single-channel-based eye-blink artifact removal technique. However, while removing the artifact, the low-frequency components from the non-artifact region of the EEG signal are also removed by SSA. To preserve these low-frequency components, in this paper, we have proposed a new methodology by integrating the SSA with continuous wavelet transform (CWT) and the k-means clustering algorithm that removes the eye-blink artifact from the single-channel EEG signals without altering the low frequencies of the EEG signal. The proposed method is evaluated on both synthetic and real EEG signals. The results also show the superiority of the proposed method over the existing methods.
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Shiels TA, Oxley TJ, Fitzgerald PB, Opie NL, Wong YT, Grayden DB, John SE. Feasibility of using discrete Brain Computer Interface for people with Multiple Sclerosis. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2021; 2021:5686-5689. [PMID: 34892412 DOI: 10.1109/embc46164.2021.9629518] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
AIM Brain-Computer Interfaces (BCIs) hold promise to provide people with partial or complete paralysis, the ability to control assistive technology. This study reports offline classification of imagined and executed movements of the upper and lower limb in one participant with multiple sclerosis and people with no limb function deficits. METHODS We collected neural signals using electroencephalography (EEG) while participants performed executed and imagined motor tasks as directed by prompts shown on a screen. RESULTS Participants with no limb function attained >70% decoding accuracy on their best-imagined task compared to rest and on at-least one task comparison. The participant with multiple sclerosis also achieved accuracies within the range of participants with no limb function loss.Clinical Relevance - While only one case study is provided it was promising that the participant with MS was able to achieve comparable classification to that of the seven healthy controls. Further studies are needed to assess whether people suffering from MS may be able to use a BCI to improve their quality of life.
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Noorbasha SK, Florence Sudha G. Novel approach to remove Electrical Shift and Linear Trend artifact from single channel EEG. Biomed Phys Eng Express 2021; 7. [PMID: 34584019 DOI: 10.1088/2057-1976/ac2aee] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2021] [Accepted: 09/28/2021] [Indexed: 11/12/2022]
Abstract
Electroencephalogram (EEG) signals are crucial to Brain-Computer Interfacing (BCI). However, these are vulnerable to a variety of unintended artifacts that could negatively impact the precise brain function assessment. This paper provides a new algorithm to eliminate Electrical Shift and Linear Trend artifact (ESLT) in EEG using Singular Spectrum Analysis (SSA) and Enhanced local Polynomial (LP) Approximation-based Total Variation (EPATV). The contaminated single channel EEG is subdivided into multiple bands of frequency components by SSA. In order to acquire all LP and TV components, EPATV filtering is applied over the contaminated component frequency band. Filtered sub-signal is collected by subtracting both the LP and TV components from the component contaminated frequency band. Then, the addition of filtered sub-signal and remaining SSA frequency band components yield the final denoised EEG signal. The effectiveness of the proposed method in this paper is evaluated using the data obtained from three databases and compared with the existing methods. From the extensive simulation results, it is inferred that the algorithm discussed in the paper is effective when compared the existing methods, exhibiting a highest averaged Correlation Coefficient (CC) of 0.9534, averaged Signal to Noise Ratio (SNR) of 10.2208dB, lowest averaged Relative Root Mean Square Error (RRMSE) value 0.2787 and averaged Mean absolute Error (MAE) inαband value of 0.0557. The algorithm presented in this paper may be a viable choice for extracting ESLT artifact from a small streaming section of the EEG without requirement of the initial calibration or enormous EEG data.
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Affiliation(s)
- Sayedu Khasim Noorbasha
- Department of Electronics and Communication Engineering, Pondicherry Engineering College, Puducherry-605014, India
| | - Gnanou Florence Sudha
- Department of Electronics and Communication Engineering, Pondicherry Engineering College, Puducherry-605014, India
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Bisht A, Singh P, Kaur C, Agarwal S, Ajmani M. Progress and Challenges in Physiological Artifacts' Detection in Electroencephalographic Readings. Curr Med Imaging 2021; 18:509-531. [PMID: 34503420 DOI: 10.2174/1573405617666210908124704] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2020] [Revised: 05/04/2021] [Accepted: 06/08/2021] [Indexed: 11/22/2022]
Abstract
BACKGROUND Electroencephalographic (EEG) recordings are used to trace neural activity within the cortex to study brain functioning over time. INTRODUCTION During data acquisition, the unequivocal way to reduce artifact is to avoid artifact stimulating events. Though there are certain artifacts that make this task challenging due to their association with the internal human mechanism, in the human-computer interface, these physiological artifacts are of great assistance and act as a command signal for controlling a device or an application (communication). That is why pre-processing of electroencephalographic readings has been a progressive area of exploration, as none of the published work can be viewed as a benchmark for constructive artifact handling. METHOD This review offers a comprehensive insight into state of the art physiological artifact removal techniques listed so far. The study commences from the single-stage traditional techniques to the multistage techniques, examining the pros and cons of each discussed technique. Also, this review paper gives a general idea of various datasets available and briefs the topical trend in EEG signal processing. RESULT Comparing the state of the art techniques with hybrid ones on the basis of performance and computational complexity, it has been observed that the single-channel techniques save computational time but lack in effective artifact removal especially physiological artifacts. On the other hand, hybrid techniques merge the essential characteristics resulting in increased performance, but time consumption and complexity remain an issue. CONCLUSION Considering the high probability of the presence of multiple artifacts in EEG channels, a trade-off between performance, time and computational complexity is the only key for effective processing of artifacts in the time ahead. This paper is anticipated to facilitate upcoming researchers in enriching the contemporary artifact handling techniques to mitigate the expert's burden.
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Affiliation(s)
- Amandeep Bisht
- Department of Electronics and Communications, UIET, Sector 25, Panjab University, Chandigarh-160014. India
| | - Preeti Singh
- Department of Electronics and Communications, UIET, Sector 25, Panjab University, Chandigarh-160014. India
| | - Chamandeep Kaur
- Department of Electronics and Communications, UIET, Sector 25, Panjab University, Chandigarh-160014. India
| | - Sunil Agarwal
- Department of Electronics and Communications, UIET, Sector 25, Panjab University, Chandigarh-160014. India
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Tost A, Migliorelli C, Bachiller A, Medina-Rivera I, Romero S, García-Cazorla Á, Mañanas MA. Choosing Strategies to Deal with Artifactual EEG Data in Children with Cognitive Impairment. ENTROPY (BASEL, SWITZERLAND) 2021; 23:1030. [PMID: 34441170 PMCID: PMC8392530 DOI: 10.3390/e23081030] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/15/2021] [Revised: 07/23/2021] [Accepted: 08/05/2021] [Indexed: 12/21/2022]
Abstract
Rett syndrome is a disease that involves acute cognitive impairment and, consequently, a complex and varied symptomatology. This study evaluates the EEG signals of twenty-nine patients and classify them according to the level of movement artifact. The main goal is to achieve an artifact rejection strategy that performs well in all signals, regardless of the artifact level. Two different methods have been studied: one based on the data distribution and the other based on the energy function, with entropy as its main component. The method based on the data distribution shows poor performance with signals containing high amplitude outliers. On the contrary, the method based on the energy function is more robust to outliers. As it does not depend on the data distribution, it is not affected by artifactual events. A double rejection strategy has been chosen, first on a motion signal (accelerometer or EEG low-pass filtered between 1 and 10 Hz) and then on the EEG signal. The results showed a higher performance when working combining both artifact rejection methods. The energy-based method, to isolate motion artifacts, and the data-distribution-based method, to eliminate the remaining lower amplitude artifacts were used. In conclusion, a new method that proves to be robust for all types of signals is designed.
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Affiliation(s)
- Ana Tost
- Biomedical Engineering Research Centre (CREB), Department of Automatic Control (ESAII), Universitat Politècnica de Catalunya (UPC), 08028 Barcelona, Spain; (C.M.); (A.B.); (S.R.); (M.A.M.)
| | - Carolina Migliorelli
- Biomedical Engineering Research Centre (CREB), Department of Automatic Control (ESAII), Universitat Politècnica de Catalunya (UPC), 08028 Barcelona, Spain; (C.M.); (A.B.); (S.R.); (M.A.M.)
- CIBER de Bioingeniería, Biomateriales y Nanomedicina (CIBER-BBN), 28029 Madrid, Spain
- Institut de Recerca Sant Joan de Déu, 08950 Barcelona, Spain; (I.M.-R.); (Á.G.-C.)
| | - Alejandro Bachiller
- Biomedical Engineering Research Centre (CREB), Department of Automatic Control (ESAII), Universitat Politècnica de Catalunya (UPC), 08028 Barcelona, Spain; (C.M.); (A.B.); (S.R.); (M.A.M.)
- CIBER de Bioingeniería, Biomateriales y Nanomedicina (CIBER-BBN), 28029 Madrid, Spain
- Institut de Recerca Sant Joan de Déu, 08950 Barcelona, Spain; (I.M.-R.); (Á.G.-C.)
| | - Inés Medina-Rivera
- Institut de Recerca Sant Joan de Déu, 08950 Barcelona, Spain; (I.M.-R.); (Á.G.-C.)
| | - Sergio Romero
- Biomedical Engineering Research Centre (CREB), Department of Automatic Control (ESAII), Universitat Politècnica de Catalunya (UPC), 08028 Barcelona, Spain; (C.M.); (A.B.); (S.R.); (M.A.M.)
- CIBER de Bioingeniería, Biomateriales y Nanomedicina (CIBER-BBN), 28029 Madrid, Spain
- Institut de Recerca Sant Joan de Déu, 08950 Barcelona, Spain; (I.M.-R.); (Á.G.-C.)
| | - Ángeles García-Cazorla
- Institut de Recerca Sant Joan de Déu, 08950 Barcelona, Spain; (I.M.-R.); (Á.G.-C.)
- Neurometabolic Unit and Synaptic Metabolism Lab, Neurology Department, Institut Pediàtric de Recerca, Hospital Sant Joan de Déu, metabERN and CIBERER-ISCIII, 08950 Barcelona, Spain
| | - Miguel A. Mañanas
- Biomedical Engineering Research Centre (CREB), Department of Automatic Control (ESAII), Universitat Politècnica de Catalunya (UPC), 08028 Barcelona, Spain; (C.M.); (A.B.); (S.R.); (M.A.M.)
- CIBER de Bioingeniería, Biomateriales y Nanomedicina (CIBER-BBN), 28029 Madrid, Spain
- Institut de Recerca Sant Joan de Déu, 08950 Barcelona, Spain; (I.M.-R.); (Á.G.-C.)
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Ranjan R, Chandra Sahana B, Kumar Bhandari A. Ocular artifact elimination from electroencephalography signals: A systematic review. Biocybern Biomed Eng 2021. [DOI: 10.1016/j.bbe.2021.06.007] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
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10
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Bi-Smoothed Functional Independent Component Analysis for EEG Artifact Removal. MATHEMATICS 2021. [DOI: 10.3390/math9111243] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Motivated by mapping adverse artifactual events caused by body movements in electroencephalographic (EEG) signals, we present a functional independent component analysis based on the spectral decomposition of the kurtosis operator of a smoothed principal component expansion. A discrete roughness penalty is introduced in the orthonormality constraint of the covariance eigenfunctions in order to obtain the smoothed basis for the proposed independent component model. To select the tuning parameters, a cross-validation method that incorporates shrinkage is used to enhance the performance on functional representations with a large basis dimension. This method provides an estimation strategy to determine the penalty parameter and the optimal number of components. Our independent component approach is applied to real EEG data to estimate genuine brain potentials from a contaminated signal. As a result, it is possible to control high-frequency remnants of neural origin overlapping artifactual sources to optimize their removal from the signal. An R package implementing our methods is available at CRAN.
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Ieracitano C, Mammone N, Hussain A, Morabito FC. A novel explainable machine learning approach for EEG-based brain-computer interface systems. Neural Comput Appl 2021. [DOI: 10.1007/s00521-020-05624-w] [Citation(s) in RCA: 20] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
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12
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Shahbakhti M, Rodrigues AS, Augustyniak P, Broniec-Wójcik A, Sološenko A, Beiramvand M, Marozas V. SWT-kurtosis based algorithm for elimination of electrical shift and linear trend from EEG signals. Biomed Signal Process Control 2021. [DOI: 10.1016/j.bspc.2020.102373] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Shahbakhti M, Beiramvand M, Nazari M, Broniec-Wojcik A, Augustyniak P, Rodrigues AS, Wierzchon M, Marozas V. VME-DWT: An Efficient Algorithm for Detection and Elimination of Eye Blink From Short Segments of Single EEG Channel. IEEE Trans Neural Syst Rehabil Eng 2021; 29:408-417. [PMID: 33497337 DOI: 10.1109/tnsre.2021.3054733] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Abstract
OBJECTIVE Recent advances in development of low-cost single-channel electroencephalography (EEG) headbands have opened new possibilities for applications in health monitoring and brain-computer interface (BCI) systems. These recorded EEG signals, however, are often contaminated by eye blink artifacts that can yield the fallacious interpretation of the brain activity. This paper proposes an efficient algorithm, VME-DWT, to remove eye blinks in a short segment of the single EEG channel. METHOD The proposed algorithm: (a) locates eye blink intervals using Variational Mode Extraction (VME) and (b) filters only contaminated EEG interval using an automatic Discrete Wavelet Transform (DWT) algorithm. The performance of VME-DWT is compared with an automatic Variational Mode Decomposition (AVMD) and a DWT-based algorithms, proposed for suppressing eye blinks in a short segment of the single EEG channel. RESULTS The VME-DWT detects and filters 95% of the eye blinks from the contaminated EEG signals with SNR ranging from -8 to +3 dB. The VME-DWT shows superiority to the AVMD and DWT with the higher mean value of correlation coefficient (0.92 vs. 0.83, 0.58) and lower mean value of RRMSE (0.42 vs. 0.59, 0.87). SIGNIFICANCE The VME-DWT can be a suitable algorithm for removal of eye blinks in low-cost single-channel EEG systems as it is: (a) computationally-efficient, the contaminated EEG signal is filtered in millisecond time resolution, (b) automatic, no human intervention is required, (c) low-invasive, EEG intervals without contamination remained unaltered, and (d) low-complexity, without need to the artifact reference.
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14
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Baniqued PDE, Stanyer EC, Awais M, Alazmani A, Jackson AE, Mon-Williams MA, Mushtaq F, Holt RJ. Brain-computer interface robotics for hand rehabilitation after stroke: a systematic review. J Neuroeng Rehabil 2021; 18:15. [PMID: 33485365 PMCID: PMC7825186 DOI: 10.1186/s12984-021-00820-8] [Citation(s) in RCA: 57] [Impact Index Per Article: 19.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2019] [Accepted: 01/12/2021] [Indexed: 12/13/2022] Open
Abstract
BACKGROUND Hand rehabilitation is core to helping stroke survivors regain activities of daily living. Recent studies have suggested that the use of electroencephalography-based brain-computer interfaces (BCI) can promote this process. Here, we report the first systematic examination of the literature on the use of BCI-robot systems for the rehabilitation of fine motor skills associated with hand movement and profile these systems from a technical and clinical perspective. METHODS A search for January 2010-October 2019 articles using Ovid MEDLINE, Embase, PEDro, PsycINFO, IEEE Xplore and Cochrane Library databases was performed. The selection criteria included BCI-hand robotic systems for rehabilitation at different stages of development involving tests on healthy participants or people who have had a stroke. Data fields include those related to study design, participant characteristics, technical specifications of the system, and clinical outcome measures. RESULTS 30 studies were identified as eligible for qualitative review and among these, 11 studies involved testing a BCI-hand robot on chronic and subacute stroke patients. Statistically significant improvements in motor assessment scores relative to controls were observed for three BCI-hand robot interventions. The degree of robot control for the majority of studies was limited to triggering the device to perform grasping or pinching movements using motor imagery. Most employed a combination of kinaesthetic and visual response via the robotic device and display screen, respectively, to match feedback to motor imagery. CONCLUSION 19 out of 30 studies on BCI-robotic systems for hand rehabilitation report systems at prototype or pre-clinical stages of development. We identified large heterogeneity in reporting and emphasise the need to develop a standard protocol for assessing technical and clinical outcomes so that the necessary evidence base on efficiency and efficacy can be developed.
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Affiliation(s)
| | - Emily C Stanyer
- School of Psychology, University of Leeds, Leeds, LS2 9JZ, UK
| | - Muhammad Awais
- School of Psychology, University of Leeds, Leeds, LS2 9JZ, UK
| | - Ali Alazmani
- School of Mechanical Engineering, University of Leeds, Leeds, LS2 9JT, UK
| | - Andrew E Jackson
- School of Mechanical Engineering, University of Leeds, Leeds, LS2 9JT, UK
| | | | - Faisal Mushtaq
- School of Psychology, University of Leeds, Leeds, LS2 9JZ, UK.
| | - Raymond J Holt
- School of Mechanical Engineering, University of Leeds, Leeds, LS2 9JT, UK
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15
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Prasad DS, Chanamallu SR, Prasad KS. Mitigation of ocular artifacts for EEG signal using improved earth worm optimization-based neural network and lifting wavelet transform. Comput Methods Biomech Biomed Engin 2020; 24:551-578. [PMID: 33245687 DOI: 10.1080/10255842.2020.1839893] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
Abstract
An Electroencephalogram (EEG) is often tarnished by various categories of artifacts. Numerous efforts have been taken to improve its quality by eliminating the artifacts. The EEG involves the biological artifacts (ocular artifacts, ECG and EMG artifacts), and technical artifacts (noise from the electric power source, amplitude artifacts, etc.). From these physiological artifacts, ocular activities are one of the most well-known over other noise sources. Reducing the risks of this event and avoid it is practically very difficult, even impossible, as the ocular activities are involuntary tasks. To trim down the effect of ocular artifacts overlapping with EEG signal and overwhelm the subjected flaws, few intelligent approaches have to be developed. This proposal tempts to implement a novel method for detecting and preventing ocular artifacts from the EEG signal. The developed model involves two main phases: (a) Detection of Ocular artifacts and (b) Removal of ocular artifacts. For detecting the ocular artifacts, initially, the EEG is subjected to decomposition process using 5-level Discrete Wavelet Transform (DWT), and Empirical Mean Curve Decomposition (EMCD). Next to the decomposition process, the features like kurtosis, variance, Shannon's entropy, and few first-order statistical features are extracted. These features will be helpful for the detection process in the classification side. For detecting the ocular artifacts from the decomposed signal, the extracted features are subjected to a machine learning algorithm called Neural Network (NN). As an improvement to the conventional NN, the training algorithm of ANN is improved by the improved Earth Worm optimization Algorithm (EWA) termed as Dual Positioned Elitism-based EWA (DPE-EWA), which updates the weight of NN to improve the performance. In the Removal phase, the optimized Lifting Wavelet Transform (LWT) is deployed, in which the improvement is made on optimizing the filter coefficients using the proposed DPE-EWA. Thus, the integration of optimized NN and optimized LWT suggests a potential possibility to accommodate the detection and removal of ocular artifacts that exist in the EEG signals.
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16
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Qin Y, Zhang N, Chen Y, Zuo X, Jiang S, Zhao X, Dong L, Li J, Zhang T, Yao D, Luo C. Rhythmic Network Modulation to Thalamocortical Couplings in Epilepsy. Int J Neural Syst 2020; 30:2050014. [PMID: 32308081 DOI: 10.1142/s0129065720500148] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
Thalamus interacts with cortical areas, generating oscillations characterized by their rhythm and levels of synchrony. However, little is known of what function the rhythmic dynamic may serve in thalamocortical couplings. This work introduced a general approach to investigate the modulatory contribution of rhythmic scalp network to the thalamo-frontal couplings in juvenile myoclonic epilepsy (JME) and frontal lobe epilepsy (FLE). Here, time-varying rhythmic network was constructed using the adapted directed transfer function between EEG electrodes, and then was applied as a modulator in fMRI-based thalamocortical functional couplings. Furthermore, the relationship between corticocortical connectivity and rhythm-dependent thalamocortical coupling was examined. The results revealed thalamocortical couplings modulated by EEG scalp network have frequency-dependent characteristics. Increased thalamus- sensorimotor network (SMN) and thalamus-default mode network (DMN) couplings in JME were strongly modulated by alpha band. These thalamus-SMN couplings demonstrated enhanced association with SMN-related corticocortical connectivity. In addition, altered theta-dependent and beta-dependent thalamus-frontoparietal network (FPN) couplings were found in FLE. The reduced theta-dependent thalamus-FPN couplings were associated with the decreased FPN-related corticocortical connectivity. This study proposed interactive links between the rhythmic modulation and thalamocortical coupling. The crucial role of SMN and FPN in subcortical-cortical circuit may have implications for intervention in generalized and focal epilepsy.
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Affiliation(s)
- Yun Qin
- The Clinical Hospital of Chengdu Brain Science Institute, MOE Key Lab for Neuroinformation, High-Field Magnetic Resonance Brain Imaging Key Laboratory of Sichuan Province, University of Electronic Science and Technology of China, Chengdu 610054, P. R. China
| | - Nan Zhang
- The Clinical Hospital of Chengdu Brain Science Institute, MOE Key Lab for Neuroinformation, High-Field Magnetic Resonance Brain Imaging Key Laboratory of Sichuan Province, University of Electronic Science and Technology of China, Chengdu 610054, P. R. China
| | - Yan Chen
- The Clinical Hospital of Chengdu Brain Science Institute, MOE Key Lab for Neuroinformation, High-Field Magnetic Resonance Brain Imaging Key Laboratory of Sichuan Province, University of Electronic Science and Technology of China, Chengdu 610054, P. R. China
| | - Xiaojun Zuo
- The Clinical Hospital of Chengdu Brain Science Institute, MOE Key Lab for Neuroinformation, High-Field Magnetic Resonance Brain Imaging Key Laboratory of Sichuan Province, University of Electronic Science and Technology of China, Chengdu 610054, P. R. China
| | - Sisi Jiang
- The Clinical Hospital of Chengdu Brain Science Institute, MOE Key Lab for Neuroinformation, High-Field Magnetic Resonance Brain Imaging Key Laboratory of Sichuan Province, University of Electronic Science and Technology of China, Chengdu 610054, P. R. China
| | - Xiaole Zhao
- The Clinical Hospital of Chengdu Brain Science Institute, MOE Key Lab for Neuroinformation, High-Field Magnetic Resonance Brain Imaging Key Laboratory of Sichuan Province, University of Electronic Science and Technology of China, Chengdu 610054, P. R. China
| | - Li Dong
- The Clinical Hospital of Chengdu Brain Science Institute, MOE Key Lab for Neuroinformation, High-Field Magnetic Resonance Brain Imaging Key Laboratory of Sichuan Province, University of Electronic Science and Technology of China, Chengdu 610054, P. R. China
| | - Jianfu Li
- The Clinical Hospital of Chengdu Brain Science Institute, MOE Key Lab for Neuroinformation, High-Field Magnetic Resonance Brain Imaging Key Laboratory of Sichuan Province, University of Electronic Science and Technology of China, Chengdu 610054, P. R. China
| | - Tao Zhang
- The Clinical Hospital of Chengdu Brain Science Institute, MOE Key Lab for Neuroinformation, High-Field Magnetic Resonance Brain Imaging Key Laboratory of Sichuan Province, University of Electronic Science and Technology of China, Chengdu 610054, P. R. China
| | - Dezhong Yao
- The Clinical Hospital of Chengdu Brain Science Institute, MOE Key Lab for Neuroinformation, High-Field Magnetic Resonance Brain Imaging Key Laboratory of Sichuan Province, University of Electronic Science and Technology of China, Chengdu 610054, P. R. China.,Research Unit of NeuroInformation, Chinese Academy of Medical Sciences, 2019RU035, Chengdu, P. R. China
| | - Cheng Luo
- The Clinical Hospital of Chengdu Brain Science Institute, MOE Key Lab for Neuroinformation, High-Field Magnetic Resonance Brain Imaging Key Laboratory of Sichuan Province, University of Electronic Science and Technology of China, Chengdu 610054, P. R. China.,Research Unit of NeuroInformation, Chinese Academy of Medical Sciences, 2019RU035, Chengdu, P. R. China
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17
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Talukdar U, Hazarika SM, Gan JQ. Adaptation of Common Spatial Patterns based on mental fatigue for motor-imagery BCI. Biomed Signal Process Control 2020. [DOI: 10.1016/j.bspc.2019.101829] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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18
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Val-Calvo M, Álvarez-Sánchez JR, Ferrández-Vicente JM, Díaz-Morcillo A, Fernández-Jover E. Real-Time Multi-Modal Estimation of Dynamically Evoked Emotions Using EEG, Heart Rate and Galvanic Skin Response. Int J Neural Syst 2020; 30:2050013. [DOI: 10.1142/s0129065720500136] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
Emotion estimation systems based on brain and physiological signals such as electro encephalography (EEG), blood-volume pressure (BVP), and galvanic skin response (GSR) are gaining special attention in recent years due to the possibilities they offer. The field of human–robot interactions (HRIs) could benefit from a broadened understanding of the brain and physiological emotion encoding, together with the use of lightweight software and cheap wearable devices, and thus improve the capabilities of robots to fully engage with the users emotional reactions. In this paper, a previously developed methodology for real-time emotion estimation aimed for its use in the field of HRI is tested under realistic circumstances using a self-generated database created using dynamically evoked emotions. Other state-of-the-art, real-time approaches address emotion estimation using constant stimuli to facilitate the analysis of the evoked responses, remaining far from real scenarios since emotions are dynamically evoked. The proposed approach studies the feasibility of the emotion estimation methodology previously developed, under an experimentation paradigm that imitates a more realistic scenario involving dynamically evoked emotions by using a dramatic film as the experimental paradigm. The emotion estimation methodology has proved to perform on real-time constraints while maintaining high accuracy on emotion estimation when using the self-produced dynamically evoked emotions multi-signal database.
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Affiliation(s)
- Mikel Val-Calvo
- Departamento de Inteligencia Artificial, UNED, Juan del Rosal, 16, Madrid, E-28040, Spain
- Departamento de Tecnologías de la Información y las Comunicaciones, Univ. Politécnica de Cartagena, Edif. Antigones, Pza del Hospital, 1, E-30202 Cartagena, Spain
| | | | - Jose Manuel Ferrández-Vicente
- Departamento de Tecnologías de la Información y las Comunicaciones, Univ. Politécnica de Cartagena, Edif. Antigones, Pza del Hospital, 1, E-30202 Cartagena, Spain
| | - Alejandro Díaz-Morcillo
- Departamento de Tecnologías de la Información y las Comunicaciones, Univ. Politécnica de Cartagena, Edif. Antigones, Pza del Hospital, 1, E-30202 Cartagena, Spain
| | - Eduardo Fernández-Jover
- Instituto de Bioingeniería, Univ. Miguel Hernández, Av. de la Universidad s/n. E-03202 Elche, Spain and CIBER-BBN, Spain
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19
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Employing PCA and t-statistical approach for feature extraction and classification of emotion from multichannel EEG signal. EGYPTIAN INFORMATICS JOURNAL 2020. [DOI: 10.1016/j.eij.2019.10.002] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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20
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Talukdar U, Hazarika SM, Gan JQ. Adaptive feature extraction in EEG-based motor imagery BCI: tracking mental fatigue. J Neural Eng 2020; 17:016020. [PMID: 31683268 DOI: 10.1088/1741-2552/ab53f1] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
OBJECTIVE Electroencephalogram (EEG) signals are non-stationary. This could be due to internal fluctuation of brain states such as fatigue, frustration, etc. This necessitates the development of adaptive brain-computer interfaces (BCI) whose performance does not deteriorate significantly with the adversary change in the cognitive state. In this paper, we put forward an unsupervised adaptive scheme to adapt the feature extractor of motor imagery (MI) BCIs by tracking the fatigue level of the user. APPROACH Eleven subjects participated in the study during which they accomplished MI tasks while self-reporting their perceived levels of mental fatigue. Out of the 11 subjects, only six completed the whole experiment, while the others quit in the middle because of experiencing high fatigue. The adaptive feature extractor is attained through the adaptation of the common spatial patterns (CSP), one of the most popular feature extraction algorithms in EEG-based BCIs. The proposed method was analyzed in two ways: offline and in near real-time. The separability of the MI EEG features extracted by the proposed adaptive CSP (ADCSP) has been compared with that by the conventional CSP (C-CSP) and another CSP based adaptive method (ACSP) in terms of: Davies Bouldin index (DBI), Fisher score (FS) and Dunn's index (DI). MAIN RESULTS Experimental results show significant improvement in the separability of MI EEG features extracted by ADCSP as compared to that by C-CSP and ACSP. SIGNIFICANCE Collectively, the results of the experiments in this study suggest that adapting CSP based on mental fatigue can improve the class separability of MI EEG features.
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Affiliation(s)
- Upasana Talukdar
- Biomimetic & Cognitive Robotics Lab, Department of Computer Science & Engineering, Tezpur University, Tezpur, India. Author to whom any correspondence should be addressed
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Low Complexity Automatic Stationary Wavelet Transform for Elimination of Eye Blinks from EEG. Brain Sci 2019; 9:brainsci9120352. [PMID: 31810263 PMCID: PMC6955982 DOI: 10.3390/brainsci9120352] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2019] [Accepted: 11/27/2019] [Indexed: 12/20/2022] Open
Abstract
The electroencephalogram signal (EEG) often suffers from various artifacts and noises that have physiological and non-physiological origins. Among these artifacts, eye blink, due to its amplitude is considered to have the most influence on EEG analysis. In this paper, a low complexity approach based on Stationary Wavelet Transform (SWT) and skewness is proposed to remove eye blink artifacts from EEG signals. The proposed method is compared against Automatic Wavelet Independent Components Analysis (AWICA) and Enhanced AWICA. Normalized Root Mean Square Error (NRMSE), Peak Signal-to-Noise Ratio (PSNR), and correlation coefficient ( ρ ) between filtered and pure EEG signals are utilized to quantify artifact removal performance. The proposed approach shows smaller NRMSE, larger PSNR, and larger correlation coefficient values compared to the other methods. Furthermore, the speed of execution of the proposed method is considerably faster than other methods, which makes it more suitable for real-time processing.
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22
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Rukhsar S, Khan Y, Farooq O, Sarfraz M, Khan A. Patient-Specific Epileptic Seizure Prediction in Long-Term Scalp EEG Signal Using Multivariate Statistical Process Control. Ing Rech Biomed 2019. [DOI: 10.1016/j.irbm.2019.08.004] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
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23
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Val-Calvo M, Álvarez-Sánchez JR, Ferrández-Vicente JM, Fernández E. Optimization of Real-Time EEG Artifact Removal and Emotion Estimation for Human-Robot Interaction Applications. Front Comput Neurosci 2019; 13:80. [PMID: 31849630 PMCID: PMC6889828 DOI: 10.3389/fncom.2019.00080] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2019] [Accepted: 11/08/2019] [Indexed: 11/13/2022] Open
Abstract
Affective human-robot interaction requires lightweight software and cheap wearable devices that could further this field. However, the estimation of emotions in real-time poses a problem that has not yet been optimized. An optimization is proposed for the emotion estimation methodology including artifact removal, feature extraction, feature smoothing, and brain pattern classification. The challenge of filtering artifacts and extracting features, while reducing processing time and maintaining high accuracy results, is attempted in this work. First, two different approaches for real-time electro-oculographic artifact removal techniques are tested and compared in terms of loss of information and processing time. Second, an emotion estimation methodology is proposed based on a set of stable and meaningful features, a carefully chosen set of electrodes, and the smoothing of the feature space. The methodology has proved to perform on real-time constraints while maintaining high accuracy on emotion estimation on the SEED database, both under subject dependent and subject independent paradigms, to test the methodology on a discrete emotional model with three affective states.
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Affiliation(s)
- Mikel Val-Calvo
- Departamento Electrónica, Tecnología de Computadoras y Proyectos, Universidad Politécnica de Cartagena, Cartagena, Spain
- Departamento de Inteligencia Artificial, UNED, Madrid, Spain
| | | | - Jose M. Ferrández-Vicente
- Departamento Electrónica, Tecnología de Computadoras y Proyectos, Universidad Politécnica de Cartagena, Cartagena, Spain
| | - Eduardo Fernández
- CIBER-BBN, Madrid, Spain
- Instituto de Bioingeniería, Universidad Miguel Hernández, Alicante, Spain
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24
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Modeling and classification of voluntary and imagery movements for brain-computer interface from fNIR and EEG signals through convolutional neural network. Health Inf Sci Syst 2019; 7:22. [PMID: 31656595 DOI: 10.1007/s13755-019-0081-5] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2019] [Accepted: 09/18/2019] [Indexed: 12/12/2022] Open
Abstract
Practical brain-computer interface (BCI) demands the learning-based adaptive model that can handle diverse problems. To implement a BCI, usually functional near-infrared spectroscopy (fNIR) is used for measuring functional changes in brain oxygenation and electroencephalography (EEG) for evaluating the neuronal electric potential regarding the psychophysiological activity. Since the fNIR modality has an issue of temporal resolution, fNIR alone is not enough to achieve satisfactory classification accuracy as multiple neural stimuli are produced by voluntary and imagery movements. This leads us to make a combination of fNIR and EEG with a view to developing a BCI model for the classification of the brain signals of the voluntary and imagery movements. This work proposes a novel approach to prepare functional neuroimages from the fNIR and EEG using eight different movement-related stimuli. The neuroimages are used to train a convolutional neural network (CNN) to formulate a predictive model for classifying the combined fNIR-EEG data. The results reveal that the combined fNIR-EEG modality approach along with a CNN provides improved classification accuracy compared to a single modality and conventional classifiers. So, the outcomes of the proposed research work will be very helpful in the implementation of the finer BCI system.
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25
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Tamburro G, Stone DB, Comani S. Automatic Removal of Cardiac Interference (ARCI): A New Approach for EEG Data. Front Neurosci 2019; 13:441. [PMID: 31133785 PMCID: PMC6517508 DOI: 10.3389/fnins.2019.00441] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2018] [Accepted: 04/17/2019] [Indexed: 11/18/2022] Open
Abstract
EEG recordings are generally affected by interference from physiological and non-physiological sources which may obscure underlying brain activity and hinder effective EEG analysis. In particular, cardiac interference can be caused by the electrical activity of the heart and/or cardiovascular activity related to blood flow. Successful EEG application in sports science settings requires a method for artifact removal that is automatic and flexible enough to be applied in a variety of acquisition conditions without requiring simultaneous ECG recordings that could restrict movement. We developed an automatic method for classifying and removing both electrical cardiac and cardiovascular artifacts (ARCI) that does not require additional ECG recording. Our method employs independent component analysis (ICA) to isolate data independent components (ICs) and identifies the artifactual ICs by evaluating specific IC features in the time and frequency domains. We applied ARCI to EEG datasets with cued artifacts and acquired during an eyes-closed condition. Data were recorded using a standard EEG wet cap with either 128 or 64 electrodes and using a novel dry electrode cap with either 97 or 64 dry electrodes. All data were decomposed into different numbers of components to evaluate the effect of ICA decomposition level on effective cardiac artifact detection. ARCI performance was evaluated by comparing automatic ICs classifications with classifications performed by experienced investigators. Automatic and investigator classifications were highly consistent resulting in an overall accuracy greater than 99% in all datasets and decomposition levels, and an average sensitivity greater than 90%. Best results were attained when data were decomposed into a fewer number of components where the method achieved perfect sensitivity (100%). Performance was also evaluated by comparing automatic component classification with externally recorded ECG. Results showed that ICs automatically classified as artifactual were significantly correlated with ECG activity whereas the other ICs were not. We also assessed that the interference affecting EEG signals was reduced by more than 82% after automatic artifact removal. Overall, ARCI represents a significant step in the detection and removal of cardiac-related EEG artifacts and can be applied in a variety of acquisition settings making it ideal for sports science applications.
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Affiliation(s)
- Gabriella Tamburro
- BIND – Behavioral Imaging and Neural Dynamics Center, University “G. d’Annunzio” of Chieti-Pescara, Chieti, Italy
- Department of Neuroscience, Imaging and Clinical Sciences, University “G. d’Annunzio” of Chieti-Pescara, Chieti, Italy
| | - David B. Stone
- BIND – Behavioral Imaging and Neural Dynamics Center, University “G. d’Annunzio” of Chieti-Pescara, Chieti, Italy
- Department of Neuroscience, Imaging and Clinical Sciences, University “G. d’Annunzio” of Chieti-Pescara, Chieti, Italy
| | - Silvia Comani
- BIND – Behavioral Imaging and Neural Dynamics Center, University “G. d’Annunzio” of Chieti-Pescara, Chieti, Italy
- Department of Neuroscience, Imaging and Clinical Sciences, University “G. d’Annunzio” of Chieti-Pescara, Chieti, Italy
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26
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Jiang X, Bian GB, Tian Z. Removal of Artifacts from EEG Signals: A Review. SENSORS (BASEL, SWITZERLAND) 2019; 19:E987. [PMID: 30813520 PMCID: PMC6427454 DOI: 10.3390/s19050987] [Citation(s) in RCA: 213] [Impact Index Per Article: 42.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/15/2018] [Revised: 02/03/2019] [Accepted: 02/21/2019] [Indexed: 11/28/2022]
Abstract
Electroencephalogram (EEG) plays an important role in identifying brain activity and behavior. However, the recorded electrical activity always be contaminated with artifacts and then affect the analysis of EEG signal. Hence, it is essential to develop methods to effectively detect and extract the clean EEG data during encephalogram recordings. Several methods have been proposed to remove artifacts, but the research on artifact removal continues to be an open problem. This paper tends to review the current artifact removal of various contaminations. We first discuss the characteristics of EEG data and the types of different artifacts. Then, a general overview of the state-of-the-art methods and their detail analysis are presented. Lastly, a comparative analysis is provided for choosing a suitable methods according to particular application.
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Affiliation(s)
- Xiao Jiang
- Institute of Automation, Chinese Academy of Science, Beijing 100190, China.
- School of Big Data and Information Engineering, Guizhou University, Guiyang 550025, China.
| | - Gui-Bin Bian
- Institute of Automation, Chinese Academy of Science, Beijing 100190, China.
| | - Zean Tian
- School of Big Data and Information Engineering, Guizhou University, Guiyang 550025, China.
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27
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Motor imagery and mental fatigue: inter-relationship and EEG based estimation. J Comput Neurosci 2018; 46:55-76. [DOI: 10.1007/s10827-018-0701-0] [Citation(s) in RCA: 25] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/27/2017] [Revised: 09/29/2018] [Accepted: 10/08/2018] [Indexed: 11/25/2022]
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28
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Mammone N, Bonanno L, Salvo SD, Marino S, Bramanti P, Bramanti A, Morabito FC. Permutation Disalignment Index as an Indirect, EEG-Based, Measure of Brain Connectivity in MCI and AD Patients. Int J Neural Syst 2017; 27:1750020. [DOI: 10.1142/s0129065717500204] [Citation(s) in RCA: 62] [Impact Index Per Article: 8.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
Objective: In this work, we introduce Permutation Disalignment Index (PDI) as a novel nonlinear, amplitude independent, robust to noise metric of coupling strength between time series, with the aim of applying it to electroencephalographic (EEG) signals recorded longitudinally from Alzheimer’s Disease (AD) and Mild Cognitive Impaired (MCI) patients. The goal is to indirectly estimate the connectivity between the cortical areas, through the quantification of the coupling strength between the corresponding EEG signals, in order to find a possible matching with the disease’s progression. Method: PDI is first defined and tested on simulated interacting dynamic systems. PDI is then applied to real EEG recorded from 8 amnestic MCI subjects and 7 AD patients, who were longitudinally evaluated at time [Formula: see text]0 and 3 months later (time [Formula: see text]1). At time [Formula: see text]1, 5 out of 8 MCI patients were still diagnosed MCI (stable MCI) whereas the remaining 3 exhibited a conversion from MCI to AD (prodromal AD). PDI was compared to the Spectral Coherence and the Dissimilarity Index. Results: Limited to the size of the analyzed dataset, both Coherence and PDI resulted sensitive to the conversion from MCI to AD, even though only PDI resulted specific. In particular, the intrasubject variability study showed that the three patients who converted to AD exhibited a significantly ([Formula: see text]) increased PDI (reduced coupling strength) in delta and theta bands. As regards Coherence, even though it significantly decreased in the three converted patients, in delta and theta bands, such a behavior was also detectable in one stable MCI patient, in delta band, thus making Coherence not specific. From the Dissimilarity Index point of view, the converted MCI showed no peculiar behavior. Conclusions: PDI significantly increased, in delta and theta bands, specifically in the MCI subjects who converted to AD. The increase of PDI reflects a reduced coupling strength among the brain areas, which is consistent with the expected connectivity reduction associated to AD progression.
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Affiliation(s)
- Nadia Mammone
- IRCCS Centro Neurolesi Bonino-Pulejo, SS. 113, Via Palermo c.da Casazza, 98124 Messina, Italy
| | - Lilla Bonanno
- IRCCS Centro Neurolesi Bonino-Pulejo, SS. 113, Via Palermo c.da Casazza, 98124 Messina, Italy
| | - Simona De Salvo
- IRCCS Centro Neurolesi Bonino-Pulejo, SS. 113, Via Palermo c.da Casazza, 98124 Messina, Italy
| | - Silvia Marino
- IRCCS Centro Neurolesi Bonino-Pulejo, SS. 113, Via Palermo c.da Casazza, 98124 Messina, Italy
| | - Placido Bramanti
- IRCCS Centro Neurolesi Bonino-Pulejo, SS. 113, Via Palermo c.da Casazza, 98124 Messina, Italy
| | - Alessia Bramanti
- Institute of Applied Sciences and Intelligent Systems Eduardo Caianiello (ISASI), National Research Council (CNR), Messina, Italy
| | - Francesco C. Morabito
- DICEAM Department of the Mediterranea University of Reggio Calabria, Via Graziella Feo di Vito, 89060 Reggio Calabria, Italy
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29
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Islam MK, Rastegarnia A, Yang Z. Methods for artifact detection and removal from scalp EEG: A review. Neurophysiol Clin 2016; 46:287-305. [PMID: 27751622 DOI: 10.1016/j.neucli.2016.07.002] [Citation(s) in RCA: 156] [Impact Index Per Article: 19.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2016] [Revised: 05/29/2016] [Accepted: 07/07/2016] [Indexed: 11/29/2022] Open
Abstract
Electroencephalography (EEG) is the most popular brain activity recording technique used in wide range of applications. One of the commonly faced problems in EEG recordings is the presence of artifacts that come from sources other than brain and contaminate the acquired signals significantly. Therefore, much research over the past 15 years has focused on identifying ways for handling such artifacts in the preprocessing stage. However, this is still an active area of research as no single existing artifact detection/removal method is complete or universal. This article presents an extensive review of the existing state-of-the-art artifact detection and removal methods from scalp EEG for all potential EEG-based applications and analyses the pros and cons of each method. First, a general overview of the different artifact types that are found in scalp EEG and their effect on particular applications are presented. In addition, the methods are compared based on their ability to remove certain types of artifacts and their suitability in relevant applications (only functional comparison is provided not performance evaluation of methods). Finally, the future direction and expected challenges of current research is discussed. Therefore, this review is expected to be helpful for interested researchers who will develop and/or apply artifact handling algorithm/technique in future for their applications as well as for those willing to improve the existing algorithms or propose a new solution in this particular area of research.
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Affiliation(s)
- Md Kafiul Islam
- Department of Electrical and Computer Engineering, National University of Singapore, Singapore
| | - Amir Rastegarnia
- Department of Electrical Engineering, University of Malayer, Malayer, Iran.
| | - Zhi Yang
- Department of Electrical and Computer Engineering, National University of Singapore, Singapore
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A semi-simulated EEG/EOG dataset for the comparison of EOG artifact rejection techniques. Data Brief 2016; 8:1004-6. [PMID: 27508255 PMCID: PMC4969208 DOI: 10.1016/j.dib.2016.06.032] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2016] [Revised: 06/12/2016] [Accepted: 06/21/2016] [Indexed: 11/20/2022] Open
Abstract
Artifact rejection techniques are used to recover the brain signals underlying artifactual electroencephalographic (EEG) segments. Although over the last few years many different artifact rejection techniques have been proposed (http://dx.doi.org/10.1109/JSEN.2011.2115236[1], http://dx.doi.org/10.1016/j.clinph.2006.09.003[2], http://dx.doi.org/10.3390/e16126553[3]), none has been established as a gold standard so far, because assessing their performance is difficult and subjective (http://dx.doi.org/10.1109/ITAB.2009.5394295[4], http://dx.doi.org/10.1016/j.bspc.2011.02.001[5], http://dx.doi.org/10.1007/978-3-540-89208-3_300. [6]). This limitation is mainly based on the fact that the underlying artifact-free brain signal is unknown, so there is no objective way to measure how close the retrieved signal is to the real one. This article solves the aforementioned problem by presenting a semi-simulated EEG dataset, where artifact-free EEG signals are manually contaminated with ocular artifacts, using a realistic head model. The significant part of this dataset is that it contains the pre-contamination EEG signals, so the brain signals underlying the EOG artifacts are known and thus the performance of every artifact rejection technique can be objectively assessed.
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