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Zaaboub N, Sandid F, Douik A, Solaiman B. Optic disc detection and segmentation using saliency mask in retinal fundus images. Comput Biol Med 2022; 150:106067. [PMID: 36150251 DOI: 10.1016/j.compbiomed.2022.106067] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2022] [Revised: 08/25/2022] [Accepted: 08/27/2022] [Indexed: 11/28/2022]
Abstract
BACKGROUND AND OBJECTIVE Detection of the Optic Disc (OD) in retinal fundus image is crucial in identifying diverse abnormal conditions in the retina such as diabetic retinopathy. Previous systems are oriented to the OD detection and segmentation. Most research failed to locate the OD in the case when the image does not have a criterion appearance. The objective of the proposed work is to precisely define a new and robust OD segmentation in color retinal fundus images. METHODS The proposed algorithm is composed of two stages: OD localization and segmentation. The first phase consists in the OD localization through: 1) a preprocessing step; 2) vessel extraction and elimination, and 3) a geometric analysis allowing to decide the OD location. For the second phase, a set of is computed in order to produce various candidates. A combination of these candidates accurately forms a completed contour of the OD. RESULTS The proposed method is evaluated using 10 publicly available databases as well as a local database. Accuracy rates in the RimOne and IDRID databases are 98.06% and 99.71%, respectively, and 100% for the Chase, Drive, HRF, Drishti, Drions, Bin Rushed, Magrabia, Messidor and LocalDB databases with an overall success rate of 99.80% and specificity rates of 99.44%, 99.64%, 99.66%, 99.66%, 99.70%, 99.87%, 99.72%, 99.83% and 99.82% for the Rim One, Drions, IDRID, Drishti, HRF, Bin Rushed, Magrabia, Messidor and proprietary databases. CONCLUSION The main advantage of the proposed approach is the robustness and the excellent performances even with critical cases of retinal images. The proposed method achieves the state-of-the-art performances with regards to the OD detection and segmentation. It is also of a great interest for clinical usage without the expert intervention to treat each image.
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Affiliation(s)
- Nihal Zaaboub
- ENIT: National Engineering School of Tunis, University Tunis El Manar, Tunisia; NOCCS-ENISo: Networked Objects Control and Communication Systems Laboratory, Tunisia.
| | - Faten Sandid
- NOCCS-ENISo: Networked Objects Control and Communication Systems Laboratory, Tunisia
| | - Ali Douik
- NOCCS-ENISo: Networked Objects Control and Communication Systems Laboratory, Tunisia; ENISo: National Engineering School of Sousse, University of Sousse, Tunisia
| | - Basel Solaiman
- Image & Information Processing Department (iTi), IMT-Atlantique, Technopôle Brest Iroise CS 83818, 29238 Brest, France
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4
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Romero-Oraá R, García M, Oraá-Pérez J, López-Gálvez MI, Hornero R. Effective Fundus Image Decomposition for the Detection of Red Lesions and Hard Exudates to Aid in the Diagnosis of Diabetic Retinopathy. SENSORS (BASEL, SWITZERLAND) 2020; 20:E6549. [PMID: 33207825 PMCID: PMC7698181 DOI: 10.3390/s20226549] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/29/2020] [Revised: 11/07/2020] [Accepted: 11/13/2020] [Indexed: 06/11/2023]
Abstract
Diabetic retinopathy (DR) is characterized by the presence of red lesions (RLs), such as microaneurysms and hemorrhages, and bright lesions, such as exudates (EXs). Early DR diagnosis is paramount to prevent serious sight damage. Computer-assisted diagnostic systems are based on the detection of those lesions through the analysis of fundus images. In this paper, a novel method is proposed for the automatic detection of RLs and EXs. As the main contribution, the fundus image was decomposed into various layers, including the lesion candidates, the reflective features of the retina, and the choroidal vasculature visible in tigroid retinas. We used a proprietary database containing 564 images, randomly divided into a training set and a test set, and the public database DiaretDB1 to verify the robustness of the algorithm. Lesion detection results were computed per pixel and per image. Using the proprietary database, 88.34% per-image accuracy (ACCi), 91.07% per-pixel positive predictive value (PPVp), and 85.25% per-pixel sensitivity (SEp) were reached for the detection of RLs. Using the public database, 90.16% ACCi, 96.26% PPV_p, and 84.79% SEp were obtained. As for the detection of EXs, 95.41% ACCi, 96.01% PPV_p, and 89.42% SE_p were reached with the proprietary database. Using the public database, 91.80% ACCi, 98.59% PPVp, and 91.65% SEp were obtained. The proposed method could be useful to aid in the diagnosis of DR, reducing the workload of specialists and improving the attention to diabetic patients.
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Affiliation(s)
- Roberto Romero-Oraá
- Biomedical Engineering Group, Universidad de Valladolid, 47011 Valladolid, Spain; (M.G.); (J.O.-P.); (M.I.L.-G.); (R.H.)
- Centro de Investigación Biomédica en Red de Bioingeniería, Biomateriales y Nanomedicina (CIBER-BBN), 28029 Madrid, Spain
| | - María García
- Biomedical Engineering Group, Universidad de Valladolid, 47011 Valladolid, Spain; (M.G.); (J.O.-P.); (M.I.L.-G.); (R.H.)
- Centro de Investigación Biomédica en Red de Bioingeniería, Biomateriales y Nanomedicina (CIBER-BBN), 28029 Madrid, Spain
| | - Javier Oraá-Pérez
- Biomedical Engineering Group, Universidad de Valladolid, 47011 Valladolid, Spain; (M.G.); (J.O.-P.); (M.I.L.-G.); (R.H.)
| | - María I. López-Gálvez
- Biomedical Engineering Group, Universidad de Valladolid, 47011 Valladolid, Spain; (M.G.); (J.O.-P.); (M.I.L.-G.); (R.H.)
- Centro de Investigación Biomédica en Red de Bioingeniería, Biomateriales y Nanomedicina (CIBER-BBN), 28029 Madrid, Spain
- Department of Ophthalmology, Hospital Clínico Universitario de Valladolid, 47003 Valladolid, Spain
- Instituto Universitario de Oftalmobiología Aplicada (IOBA), Universidad de Valladolid, 47011 Valladolid, Spain
| | - Roberto Hornero
- Biomedical Engineering Group, Universidad de Valladolid, 47011 Valladolid, Spain; (M.G.); (J.O.-P.); (M.I.L.-G.); (R.H.)
- Centro de Investigación Biomédica en Red de Bioingeniería, Biomateriales y Nanomedicina (CIBER-BBN), 28029 Madrid, Spain
- Instituto de Investigación en Matemáticas (IMUVA), Universidad de Valladolid, 47011 Valladolid, Spain
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5
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Porwal P, Pachade S, Kokare M, Deshmukh G, Son J, Bae W, Liu L, Wang J, Liu X, Gao L, Wu T, Xiao J, Wang F, Yin B, Wang Y, Danala G, He L, Choi YH, Lee YC, Jung SH, Li Z, Sui X, Wu J, Li X, Zhou T, Toth J, Baran A, Kori A, Chennamsetty SS, Safwan M, Alex V, Lyu X, Cheng L, Chu Q, Li P, Ji X, Zhang S, Shen Y, Dai L, Saha O, Sathish R, Melo T, Araújo T, Harangi B, Sheng B, Fang R, Sheet D, Hajdu A, Zheng Y, Mendonça AM, Zhang S, Campilho A, Zheng B, Shen D, Giancardo L, Quellec G, Mériaudeau F. IDRiD: Diabetic Retinopathy - Segmentation and Grading Challenge. Med Image Anal 2019; 59:101561. [PMID: 31671320 DOI: 10.1016/j.media.2019.101561] [Citation(s) in RCA: 69] [Impact Index Per Article: 13.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2019] [Revised: 09/09/2019] [Accepted: 09/16/2019] [Indexed: 02/07/2023]
Abstract
Diabetic Retinopathy (DR) is the most common cause of avoidable vision loss, predominantly affecting the working-age population across the globe. Screening for DR, coupled with timely consultation and treatment, is a globally trusted policy to avoid vision loss. However, implementation of DR screening programs is challenging due to the scarcity of medical professionals able to screen a growing global diabetic population at risk for DR. Computer-aided disease diagnosis in retinal image analysis could provide a sustainable approach for such large-scale screening effort. The recent scientific advances in computing capacity and machine learning approaches provide an avenue for biomedical scientists to reach this goal. Aiming to advance the state-of-the-art in automatic DR diagnosis, a grand challenge on "Diabetic Retinopathy - Segmentation and Grading" was organized in conjunction with the IEEE International Symposium on Biomedical Imaging (ISBI - 2018). In this paper, we report the set-up and results of this challenge that is primarily based on Indian Diabetic Retinopathy Image Dataset (IDRiD). There were three principal sub-challenges: lesion segmentation, disease severity grading, and localization of retinal landmarks and segmentation. These multiple tasks in this challenge allow to test the generalizability of algorithms, and this is what makes it different from existing ones. It received a positive response from the scientific community with 148 submissions from 495 registrations effectively entered in this challenge. This paper outlines the challenge, its organization, the dataset used, evaluation methods and results of top-performing participating solutions. The top-performing approaches utilized a blend of clinical information, data augmentation, and an ensemble of models. These findings have the potential to enable new developments in retinal image analysis and image-based DR screening in particular.
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Affiliation(s)
- Prasanna Porwal
- Shri Guru Gobind Singhji Institute of Engineering and Technology, Nanded, India; School of Biomedical Informatics, University of Texas Health Science Center at Houston, USA.
| | - Samiksha Pachade
- Shri Guru Gobind Singhji Institute of Engineering and Technology, Nanded, India; School of Biomedical Informatics, University of Texas Health Science Center at Houston, USA
| | - Manesh Kokare
- Shri Guru Gobind Singhji Institute of Engineering and Technology, Nanded, India
| | | | | | | | - Lihong Liu
- Ping An Technology (Shenzhen) Co.,Ltd, China
| | | | - Xinhui Liu
- Ping An Technology (Shenzhen) Co.,Ltd, China
| | | | - TianBo Wu
- Ping An Technology (Shenzhen) Co.,Ltd, China
| | - Jing Xiao
- Ping An Technology (Shenzhen) Co.,Ltd, China
| | | | | | - Yunzhi Wang
- School of Electrical and Computer Engineering, University of Oklahoma, USA
| | - Gopichandh Danala
- School of Electrical and Computer Engineering, University of Oklahoma, USA
| | - Linsheng He
- School of Electrical and Computer Engineering, University of Oklahoma, USA
| | - Yoon Ho Choi
- Samsung Advanced Institute for Health Sciences & Technology (SAIHST), Sungkyunkwan University, Seoul, Republic of Korea
| | - Yeong Chan Lee
- Samsung Advanced Institute for Health Sciences & Technology (SAIHST), Sungkyunkwan University, Seoul, Republic of Korea
| | - Sang-Hyuk Jung
- Samsung Advanced Institute for Health Sciences & Technology (SAIHST), Sungkyunkwan University, Seoul, Republic of Korea
| | - Zhongyu Li
- Department of Computer Science, University of North Carolina at Charlotte, USA
| | - Xiaodan Sui
- School of Information Science and Engineering, Shandong Normal University, China
| | - Junyan Wu
- Cleerly Inc., New York, United States
| | | | - Ting Zhou
- University at Buffalo, New York, United States
| | - Janos Toth
- University of Debrecen, Faculty of Informatics 4002 Debrecen, POB 400, Hungary
| | - Agnes Baran
- University of Debrecen, Faculty of Informatics 4002 Debrecen, POB 400, Hungary
| | | | | | | | | | - Xingzheng Lyu
- College of Computer Science and Technology, Zhejiang University, Hangzhou, China; Machine Learning for Bioimage Analysis Group, Bioinformatics Institute, A*STAR, Singapore
| | - Li Cheng
- Machine Learning for Bioimage Analysis Group, Bioinformatics Institute, A*STAR, Singapore; Department of Electric and Computer Engineering, University of Alberta, Canada
| | - Qinhao Chu
- School of Computing, National University of Singapore, Singapore
| | - Pengcheng Li
- School of Computing, National University of Singapore, Singapore
| | - Xin Ji
- Beijing Shanggong Medical Technology Co., Ltd., China
| | - Sanyuan Zhang
- College of Computer Science and Technology, Zhejiang University, Hangzhou, China
| | - Yaxin Shen
- Department of Computer Science and Engineering, Shanghai Jiao Tong University, China; MoE Key Lab of Artificial Intelligence, AI Institute, Shanghai Jiao Tong University, China
| | - Ling Dai
- Department of Computer Science and Engineering, Shanghai Jiao Tong University, China; MoE Key Lab of Artificial Intelligence, AI Institute, Shanghai Jiao Tong University, China
| | | | | | - Tânia Melo
- INESC TEC - Institute for Systems and Computer Engineering, Technology and Science, Porto, Portugal
| | - Teresa Araújo
- INESC TEC - Institute for Systems and Computer Engineering, Technology and Science, Porto, Portugal; FEUP - Faculty of Engineering of the University of Porto, Porto, Portugal
| | - Balazs Harangi
- University of Debrecen, Faculty of Informatics 4002 Debrecen, POB 400, Hungary
| | - Bin Sheng
- Department of Computer Science and Engineering, Shanghai Jiao Tong University, China; MoE Key Lab of Artificial Intelligence, AI Institute, Shanghai Jiao Tong University, China
| | - Ruogu Fang
- J. Crayton Pruitt Family Department of Biomedical Engineering, University of Florida, USA
| | | | - Andras Hajdu
- University of Debrecen, Faculty of Informatics 4002 Debrecen, POB 400, Hungary
| | - Yuanjie Zheng
- School of Information Science and Engineering, Shandong Normal University, China
| | - Ana Maria Mendonça
- INESC TEC - Institute for Systems and Computer Engineering, Technology and Science, Porto, Portugal; FEUP - Faculty of Engineering of the University of Porto, Porto, Portugal
| | - Shaoting Zhang
- Department of Computer Science, University of North Carolina at Charlotte, USA
| | - Aurélio Campilho
- INESC TEC - Institute for Systems and Computer Engineering, Technology and Science, Porto, Portugal; FEUP - Faculty of Engineering of the University of Porto, Porto, Portugal
| | - Bin Zheng
- School of Electrical and Computer Engineering, University of Oklahoma, USA
| | - Dinggang Shen
- Department of Radiology and BRIC, University of North Carolina at Chapel Hill, USA; Department of Brain and Cognitive Engineering, Korea University, Seoul 02841, Republic of Korea
| | - Luca Giancardo
- School of Biomedical Informatics, University of Texas Health Science Center at Houston, USA
| | | | - Fabrice Mériaudeau
- Department of Electrical and Electronic Engineering, Universiti Teknologi PETRONAS, Malaysia; ImViA/IFTIM, Université de Bourgogne, Dijon, France
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