The Free Energy Principle: Good Science and Questionable Philosophy in a Grand Unifying Theory

Major Role of Multiscale Entropy Evolution in Complex Systems and Data Science

Complex systems are prevalent in various disciplines encompassing the natural and social sciences, such as physics, biology, economics, and sociology. Leveraging data science techniques, particularly those rooted in artificial intelligence and machine learning, offers a promising avenue for comprehending the intricacies of complex systems without necessitating detailed knowledge of underlying dynamics. In this paper, we demonstrate that multiscale entropy (MSE) is pivotal in describing the steady state of complex systems. Introducing the multiscale entropy dynamics (MED) methodology, we provide a framework for dissecting system dynamics and uncovering the driving forces behind their evolution. Our investigation reveals that the MED methodology facilitates the expression of complex system dynamics through a Generalized Nonlinear Schrödinger Equation (GNSE) that thus demonstrates its potential applicability across diverse complex systems. By elucidating the entropic underpinnings of complexity, our study paves the way for a deeper understanding of dynamic phenomena. It offers insights into the behavior of complex systems across various domains.

Free energy and inference in living systems

Organisms are non-equilibrium, stationary systems self-organized via spontaneous symmetry breaking and undergoing metabolic cycles with broken detailed balance in the environment. The thermodynamic free-energy (FE) principle describes an organism's homeostasis as the regulation of biochemical work constrained by the physical FE cost. By contrast, recent research in neuroscience and theoretical biology explains a higher organism's homeostasis and allostasis as Bayesian inference facilitated by the informational FE. As an integrated approach to living systems, this study presents an FE minimization theory overarching the essential features of both the thermodynamic and neuroscientific FE principles. Our results reveal that the perception and action of animals result from active inference entailed by FE minimization in the brain, and the brain operates as a Schrödinger's machine conducting the neural mechanics of minimizing sensory uncertainty. A parsimonious model suggests that the Bayesian brain develops the optimal trajectories in neural manifolds and induces a dynamic bifurcation between neural attractors in the process of active inference.

A Quantum-Classical Model of Brain Dynamics

The study of the human psyche has elucidated a bipartite structure of logic reflecting the quantum-classical nature of the world. Accordingly, we posited an approach toward studying the brain by means of the quantum-classical dynamics of a mixed Weyl symbol. The mixed Weyl symbol can be used to describe brain processes at the microscopic level and, when averaged over an appropriate ensemble, can provide a link to the results of measurements made at the meso and macro scale. Within this approach, quantum variables (such as, for example, nuclear and electron spins, dipole momenta of particles or molecules, tunneling degrees of freedom, and so on) can be represented by spinors, whereas the electromagnetic fields and phonon modes can be treated either classically or semi-classically in phase space by also considering quantum zero-point fluctuations. Quantum zero-point effects can be incorporated into numerical simulations by controlling the temperature of each field mode via coupling to a dedicated Nosé-Hoover chain thermostat. The temperature of each thermostat was chosen in order to reproduce quantum statistics in the canonical ensemble. In this first paper, we introduce a general quantum-classical Hamiltonian model that can be tailored to study physical processes at the interface between the quantum and the classical world in the brain. While the approach is discussed in detail, numerical calculations are not reported in the present paper, but they are planned for future work. Our theory of brain dynamics subsumes some compatible aspects of three well-known quantum approaches to brain dynamics, namely the electromagnetic field theory approach, the orchestrated objective reduction theory, and the dissipative quantum model of the brain. All three models are reviewed.

Markov blankets as boundary conditions: Sweeping dirt under the rug still cleans the house

Bruineberg et al. underestimate the ontological weight of Markov blankets as actual boundaries of systems and lean toward an instrumentalist understanding thereof. Yet Markov blankets need not be deemed mere tools. Determining their reality depends on the fundamental problem of distinguishing between system and environment in physics, which, in turn, demands a metaphysical bedrock backed by a realist stance on science.