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Wu B, Li X, Lin S, Jiao R, Yang X, Shi A, Nie X, Lin Q, Qiu R. Miscanthus sp. root exudate alters rhizosphere microbial community to drive soil aggregation for heavy metal immobilization. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 949:175009. [PMID: 39053533 DOI: 10.1016/j.scitotenv.2024.175009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/16/2024] [Revised: 07/18/2024] [Accepted: 07/22/2024] [Indexed: 07/27/2024]
Abstract
The heavy metals (HMs) spatial distribution in soil is intricately shaped by aggregation processes involving chemical reactions and biological activities, which modulate HMs toxicity, migration, and accumulation. Pioneer plants play a central role in preventing HMs at source, yet the precise mechanisms underlying their involvement in soil aggregation remain unclear. This study investigates HMs distribution within rhizosphere and bulk soil aggregates of Miscanthus sp. grown in tailings to elucidate the impact of root exudates (REs) and rhizosphere microbes. The results indicate that Miscanthus sp. enhance soil stability, increasing the proportion of macroaggregates by 4.06 %-9.78 %. HMs tend to concentrate in coarse-aggregates, particularly within rhizosphere environments, while diminishing in fine-aggregates. Under HMs stress, lipids and lipid-like molecules are the most abundant REs produced by Miscanthus sp., accounting for under up to 26.74 %. These REs form complex with HMs, promoting microaggregates formation. Charged components such as sugars and amino acids further contribute to soil aggregation. REs also regulates rhizosphere bacteria and fungi, with Acidobacteriota, Chloroflexi were the dominant bacterial phyla, while Ascomycota and Basidiomycota dominate the fungal community. The synergistic effect of REs and microorganisms impact soil organic matter and nutrient content, facilitating HMs nanoparticle heteroaggregation and macroaggregates formation. Consequently, soil structure and REs shape the distribution of HMs in soil aggregation. Pioneer plants mediate REs interaction with rhizosphere microbes, promoting the distribution of HMs into macroaggregates, leading to immobilization. This study sheds light on the role of pioneer plants in regulating soil HMs, offering valuable insights for soil remediation strategies.
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Affiliation(s)
- Bohan Wu
- Guangdong Laboratory for Lingnan Modern Agriculture, Guangdong Provincial Key Laboratory of Agricultural & Rural Pollution Abatement and Environmental Safety, College of Natural Resources and Environment, South China Agricultural University, Guangzhou 510642, China
| | - Xiao Li
- Guangdong Laboratory for Lingnan Modern Agriculture, Guangdong Provincial Key Laboratory of Agricultural & Rural Pollution Abatement and Environmental Safety, College of Natural Resources and Environment, South China Agricultural University, Guangzhou 510642, China
| | - Shukun Lin
- Guangdong Laboratory for Lingnan Modern Agriculture, Guangdong Provincial Key Laboratory of Agricultural & Rural Pollution Abatement and Environmental Safety, College of Natural Resources and Environment, South China Agricultural University, Guangzhou 510642, China
| | - Ruifang Jiao
- Guangdong Provincial Key Laboratory of Applied Botany, Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems, South China Botanical Garden, Chinese Academy of Sciences, Xingke Road 723, Guangzhou 510650, China
| | - Xu Yang
- Guangdong Laboratory for Lingnan Modern Agriculture, Guangdong Provincial Key Laboratory of Agricultural & Rural Pollution Abatement and Environmental Safety, College of Natural Resources and Environment, South China Agricultural University, Guangzhou 510642, China
| | - Aoao Shi
- Guangdong Laboratory for Lingnan Modern Agriculture, Guangdong Provincial Key Laboratory of Agricultural & Rural Pollution Abatement and Environmental Safety, College of Natural Resources and Environment, South China Agricultural University, Guangzhou 510642, China
| | - Xinxing Nie
- Guangdong Laboratory for Lingnan Modern Agriculture, Guangdong Provincial Key Laboratory of Agricultural & Rural Pollution Abatement and Environmental Safety, College of Natural Resources and Environment, South China Agricultural University, Guangzhou 510642, China
| | - Qingqi Lin
- Guangdong Laboratory for Lingnan Modern Agriculture, Guangdong Provincial Key Laboratory of Agricultural & Rural Pollution Abatement and Environmental Safety, College of Natural Resources and Environment, South China Agricultural University, Guangzhou 510642, China
| | - Rongliang Qiu
- Guangdong Laboratory for Lingnan Modern Agriculture, Guangdong Provincial Key Laboratory of Agricultural & Rural Pollution Abatement and Environmental Safety, College of Natural Resources and Environment, South China Agricultural University, Guangzhou 510642, China; School of Environmental Science and Engineering, Sun Yat-sen University, Guangzhou 510006, China.
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Dradrach A, Nowosad K, Kozak B, Karczewska A. Arsenic uptake by Agrostis capillaris, as related to its genotypic diversity in the area of historical ore mining and processing. Sci Rep 2024; 14:13488. [PMID: 38866862 PMCID: PMC11169496 DOI: 10.1038/s41598-024-63830-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2024] [Accepted: 06/03/2024] [Indexed: 06/14/2024] Open
Abstract
Common bentgrass Agrostis capillaris L. is known as tolerant to toxic elements. A hypothesis was examined that its ecotypes growing in historically polluted sites show a limited arsenic uptake and have genetic features that distinguish them from commercially available cultivars. The study was conducted in Złoty Stok, a historical area of arsenic mining. Additionally, two commercial cultivars were grown in pots with arsenic-rich soils. Based on arsenic concentrations in plant roots and shoots, bioconcentration and translocation factors BCF and TF were calculated. Commercial cultivars indicated many times higher BCF shoots and TF values compared to field plants. DNA analysis of leaf blades showed a clear distinction between the plants growing in some sites and patches in the field, and also a gene overlap between the plants in the field and commercial forms. The research did not allow for identification of ecotypes with exceptionally limited arsenic uptake. Moreover, there were no significant differences between the genotypic characteristics of plants growing in polluted sites and those poorly tolerant grown from commercially available seeds. Apparently, other factors, and not genetically determined features, are responsible for A. capillaris tolerance to arsenic in Złoty Stok.
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Affiliation(s)
- Agnieszka Dradrach
- Institute of Agroecology and Plant Production, Wrocław University of Environmental and Life Sciences, Wrocław, Poland
| | - Kamila Nowosad
- Department of Genetics, Plant Breeding and Seed Production, Wrocław University of Environmental and Life Sciences, Wrocław, Poland
| | - Bartosz Kozak
- Department of Genetics, Plant Breeding and Seed Production, Wrocław University of Environmental and Life Sciences, Wrocław, Poland
| | - Anna Karczewska
- Institute of Soil Science, Plant Nutrition and Environmental Protection, Wrocław University of Environmental and Life Sciences, Wrocław, Poland.
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Salgado L, López-Sánchez CA, Colina A, Baragaño D, Forján R, Gallego JR. Hg and As pollution in the soil-plant system evaluated by combining multispectral UAV-RS, geochemical survey and machine learning. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2023; 333:122066. [PMID: 37343919 DOI: 10.1016/j.envpol.2023.122066] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/14/2023] [Revised: 06/14/2023] [Accepted: 06/15/2023] [Indexed: 06/23/2023]
Abstract
The combination of a low-density geochemical survey, multispectral data obtained with Unmanned Aerial Vehicle-Remote Sensing (UAV-RS), and a machine learning technique was tested in the search for a statistically robust prediction of contaminant distribution in soil and vegetation, for zones with a highly variable pollutant load. To this end, a novel methodology was devised by means of a limited geochemical study of topsoil and vegetation combined with multispectral data obtained by UAV-RS. The methodology was verified in an area affected by Hg and As contamination that typifies abandoned mining-metallurgy sites in recent decades. A broad selection of spectral indices were calculated to evaluate soil-plant system response, and four machine learning techniques (Multiple Linear Regression, Random Forest, Generalized Boosted Models, and Multivariate Adaptive Regression Spline) were tested to obtain robust statistical models. Random Forest (RF) provided the best non-biased models for As and Hg concentration in soil and vegetation, with R2 and rRMSE (%) ranging from 0.501 to 0.630 and from 180.72 to 46.31, respectively, and with acceptable values for RPD and RPIQ statistics. The prediction and mapping of contaminant content and distribution in the study area were well enough adjusted to the geochemical data and revealed superior accuracy for As than Hg, and for vegetation than topsoil. The results were more precise than those obtained in comparable studies that applied satellite or spectrometry data. In conclusion, the methodology presented emerges as a powerful tool for studies addressing soil and vegetation pollution and an alternative approach to classical geochemical studies, which are time-consuming and expensive.
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Affiliation(s)
- L Salgado
- SMartForest Research Group, Department of Biology of Organisms and Systems Biology, University of Oviedo, 33600 Mieres, Spain; Environmental Biogeochemistry & Raw Materials Group and Institute of Natural Resources and Territorial Planning (INDUROT), University of Oviedo, 33600 Mieres, Spain
| | - C A López-Sánchez
- SMartForest Research Group, Department of Biology of Organisms and Systems Biology, University of Oviedo, 33600 Mieres, Spain
| | - A Colina
- Environmental Biogeochemistry & Raw Materials Group and Institute of Natural Resources and Territorial Planning (INDUROT), University of Oviedo, 33600 Mieres, Spain; Department of Geography, Campus del Milán, University of Oviedo, 33011 Oviedo, Spain
| | - D Baragaño
- Environmental Biogeochemistry & Raw Materials Group and Institute of Natural Resources and Territorial Planning (INDUROT), University of Oviedo, 33600 Mieres, Spain; Escuela Politécnica de Ingeniería de Minas y Energía, University of Cantabria, 39316 Torrelavega, Spain
| | - R Forján
- Environmental Biogeochemistry & Raw Materials Group and Institute of Natural Resources and Territorial Planning (INDUROT), University of Oviedo, 33600 Mieres, Spain; Plant Production Area, Department of Biology of Organisms and Systems Biology, University of Oviedo, 33600 Mieres, Spain
| | - J R Gallego
- Environmental Biogeochemistry & Raw Materials Group and Institute of Natural Resources and Territorial Planning (INDUROT), University of Oviedo, 33600 Mieres, Spain.
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Ajeesh Krishna TP, Maharajan T, Antony Ceasar S. Significance and genetic control of membrane transporters to improve phytoremediation and biofortification processes. Mol Biol Rep 2023:10.1007/s11033-023-08521-2. [PMID: 37212961 DOI: 10.1007/s11033-023-08521-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2022] [Accepted: 05/11/2023] [Indexed: 05/23/2023]
Abstract
Humans frequently consume plant-based foods in their daily life. Contamination of agricultural soils by heavy metals (HMs) is a major food and nutritional security issue. The crop plants grown in HM-contaminated agricultural soil may accumulate more HMs in their edible part, further transferring into the food chain. Consumption of HM-rich crops can cause severe health issues in humans. On the other hand, the low content of the essential HM in the edible part of the crop also causes health problems. Therefore, researchers must try to reduce the non-essential HM in the edible part of the crop plants and improve the essential HMs. Phytoremediation and biofortification are the two strategies for resolving this problem. The genetic component helps to improve the efficiency of phytoremediation and biofortification processes in plants. They help eliminate HMs from soil and improve essential HM content in crop plants. The membrane transporter genes (genetic components) are critical in these two strategies. Therefore, engineering membrane transporter genes may help reduce the non-essential HM content in the edible part of crop plants. Targeted gene editing by genome editing tools like CRISPR could help plants achieve efficient phytoremediation and biofortification. This article covers gene editing's scope, application, and implication to improve the phytoremediation and biofortification processes in non-crop and crop plants.
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Affiliation(s)
- T P Ajeesh Krishna
- Division of Plant Molecular Biology and Biotechnology, Department of Biosciences, Rajagiri College of Social Sciences, Kochi, Kerala, 683104, India
| | - Theivanayagam Maharajan
- Division of Plant Molecular Biology and Biotechnology, Department of Biosciences, Rajagiri College of Social Sciences, Kochi, Kerala, 683104, India
| | - S Antony Ceasar
- Division of Plant Molecular Biology and Biotechnology, Department of Biosciences, Rajagiri College of Social Sciences, Kochi, Kerala, 683104, India.
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Shi J, Qian W, Jin Z, Zhou Z, Wang X, Yang X. Evaluation of soil heavy metals pollution and the phytoremediation potential of copper-nickel mine tailings ponds. PLoS One 2023; 18:e0277159. [PMID: 36867622 PMCID: PMC9983881 DOI: 10.1371/journal.pone.0277159] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/21/2022] [Accepted: 12/30/2022] [Indexed: 03/04/2023] Open
Abstract
Heavy metal pollution in soils caused by mining has led to major environmental problems around the globe and seriously threatens the ecological environment. The assessment of heavy metal pollution and the local phytoremediation potential of contaminated sites is an important prerequisite for phytoremediation. Therefore, the purpose of this study was to understand the characteristics of heavy metal pollution around a copper-nickel mine tailings pond and screen local plant species that could be potentially suitable for phytoremediation. The results showed that Cd, Cu, Ni, and Cr in the soil around the tailings pond were at the heavy pollution level, Mn and Pb pollution was moderate, and Zn and As pollution was light; The positive matrix factorization (PMF) model results showed that the contributions made by industrial pollution to Cu and Ni were 62.5% and 66.5%, respectively, atmospheric sedimentation and agricultural pollution contributions to Cr and Cd were 44.6% and 42.8%, respectively, the traffic pollution contribution to Pb was 41.2%, and the contributions made by natural pollution sources to Mn, Zn, and As were 54.5%, 47.9%, and 40.0% respectively. The maximum accumulation values for Cu, Ni, Cr, Cd, and As in 10 plants were 53.77, 102.67, 91.10, 1.16 and 7.23 mg/kg, respectively, which exceeded the normal content of heavy metals in plants. Ammophila breviligulata Fernald had the highest comprehensive extraction coefficient (CEI) and comprehensive stability coefficient (CSI) at 0.81 and 0.83, respectively. These results indicate that the heavy metal pollution in the soil around the copper nickel mine tailings pond investigated in this study is serious and may affect the normal growth of plants. Ammophila breviligulata Fernald has a strong comprehensive remediation capacity and can be used as a remediation plant species for multiple metal compound pollution sites.
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Affiliation(s)
- Jianfei Shi
- University of Chinese Academy of Science, Beijing, China
- Xinjiang Institute of Ecology and Geography, Chinese Academy of Science/National Native-Oasis Ecology Construction Engineering Technology Research Center, Urumqi, China
| | - Wenting Qian
- Xinjiang Institute of Ecology and Geography, Chinese Academy of Science/National Native-Oasis Ecology Construction Engineering Technology Research Center, Urumqi, China
- * E-mail: (ZJ); (WQ)
| | - Zhengzhong Jin
- Xinjiang Institute of Ecology and Geography, Chinese Academy of Science/National Native-Oasis Ecology Construction Engineering Technology Research Center, Urumqi, China
- * E-mail: (ZJ); (WQ)
| | - Zhibin Zhou
- Xinjiang Institute of Ecology and Geography, Chinese Academy of Science/National Native-Oasis Ecology Construction Engineering Technology Research Center, Urumqi, China
| | - Xin Wang
- University of Chinese Academy of Science, Beijing, China
| | - Xiaoliang Yang
- University of Chinese Academy of Science, Beijing, China
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Calluna vulgaris as a Valuable Source of Bioactive Compounds: Exploring Its Phytochemical Profile, Biological Activities and Apitherapeutic Potential. PLANTS 2022; 11:plants11151993. [PMID: 35956470 PMCID: PMC9370339 DOI: 10.3390/plants11151993] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/05/2022] [Revised: 07/25/2022] [Accepted: 07/29/2022] [Indexed: 01/23/2023]
Abstract
Calluna vulgaris, belonging to the Ericaceae family, is an invasive plant that has widely spread from Europe all across Asia, North America, Australia and New Zealand. Being able to survive in rigid soil and environmental conditions, it is nowadays considered to be of high nature-conservation value. Known for its nutritional and medicinal properties, C. vulgaris stands out for its varied physiochemical composition, spotlighting a wide range of biological activity. Among the most important bioactive compounds identified in C. vulgaris, the phenolic components found in different parts of this herbaceous plant are the main source of its diverse pro-health properties (antioxidant, anti-inflammatory, antimicrobial, chemoprotective, etc.). Nonetheless, this plant exhibits an excellent nectariferous potential for social insects such as honeybees; therefore, comparing the bioactive compounds observed in the plant and in the final product of the beehive, namely honey, will help us understand and find new insights into the health benefits provided by the consumption of C. vulgaris-related products. Thus, the main interest of this work is to review the nutritional profile, chemical composition and biological activities of the C. vulgaris plant and its related honey in order to encourage the future exploration and use of this health-promoting plant in novel foods, pharmacological products and apitherapy.
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Cecchi G, Di Piazza S, Rosatto S, Mariotti MG, Roccotiello E, Zotti M. A Mini-Review on the Co-growth and Interactions Among Microorganisms (Fungi and Bacteria) From Rhizosphere of Metal-Hyperaccumulators. FRONTIERS IN FUNGAL BIOLOGY 2021; 2:787381. [PMID: 37744132 PMCID: PMC10512210 DOI: 10.3389/ffunb.2021.787381] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/30/2021] [Accepted: 10/27/2021] [Indexed: 09/26/2023]
Abstract
The co-growth and synergistic interactions among fungi and bacteria from the rhizosphere of plants able to hyper accumulate potentially toxic metals (PTMs) are largely unexplored. Fungi and bacteria contribute in an essential way to soil biogeochemical cycles mediating the nutrition, growth development, and health of associated plants at the rhizosphere level. Microbial consortia improve the formation of soil aggregates and soil fertility, producing organic acids and siderophores that increase solubility, mobilization, and consequently the accumulation of nutrients and metals from the rhizosphere. These microorganism consortia can both mitigate the soil conditions promoting plant colonization and increase the performance of hyperaccumulator plants. Indeed, microfungi and bacteria from metalliferous soils or contaminated matrices are commonly metal-tolerant and can play a key role for plants in the phytoextraction or phytostabilization of metals. However, few works deepen the effects of the inoculation of microfungal and bacterial consortia in the rhizosphere of metallophytes and their synergistic activity. This mini-review aimed to collect and report the data regarding the role of microbial consortia and their potentialities known to date. Moreover, our new data had shown an active fungal-bacteria consortium in the rhizosphere of the hyperaccumulator plant Alyssoides utriculata.
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Affiliation(s)
- Grazia Cecchi
- Laboratory of Mycology, Department of Earth, Environment and Life Sciences, University of Genoa, Genoa, Italy
| | - Simone Di Piazza
- Laboratory of Mycology, Department of Earth, Environment and Life Sciences, University of Genoa, Genoa, Italy
| | - Stefano Rosatto
- Laboratory of Plant Biology, Department of Earth, Environment and Life Sciences, University of Genoa, Genoa, Italy
| | - Mauro Giorgio Mariotti
- Laboratory of Plant Biology, Department of Earth, Environment and Life Sciences, University of Genoa, Genoa, Italy
| | - Enrica Roccotiello
- Laboratory of Plant Biology, Department of Earth, Environment and Life Sciences, University of Genoa, Genoa, Italy
| | - Mirca Zotti
- Laboratory of Mycology, Department of Earth, Environment and Life Sciences, University of Genoa, Genoa, Italy
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