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Abdul Rahman A, Mohd Isa IL, Tofail SAM, Bartlomiej L, Rodriguez BJ, Biggs MJ, Pandit A. Modification of Living Diatom, Thalassiosira weissflogii, with a Calcium Precursor through a Calcium Uptake Mechanism: A Next Generation Biomaterial for Advanced Delivery Systems. ACS APPLIED BIO MATERIALS 2024; 7:4102-4115. [PMID: 38758756 PMCID: PMC11190972 DOI: 10.1021/acsabm.4c00431] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2024] [Revised: 05/06/2024] [Accepted: 05/07/2024] [Indexed: 05/19/2024]
Abstract
The diatom's frustule, characterized by its rugged and porous exterior, exhibits a remarkable biomimetic morphology attributable to its highly ordered pores, extensive surface area, and unique architecture. Despite these advantages, the toxicity and nonbiodegradable nature of silica-based organisms pose a significant challenge when attempting to utilize these organisms as nanotopographically functionalized microparticles in the realm of biomedicine. In this study, we addressed this limitation by modulating the chemical composition of diatom microparticles by modulating the active silica metabolic uptake mechanism while maintaining their intricate three-dimensional architecture through calcium incorporation into living diatoms. Here, the diatom Thalassiosira weissflogii was chemically modified to replace its silica composition with a biodegradable calcium template, while simultaneously preserving the unique three-dimensional (3D) frustule structure with hierarchical patterns of pores and nanoscale architectural features, which was evident by the deposition of calcium as calcium carbonate. Calcium hydroxide is incorporated into the exoskeleton through the active mechanism of calcium uptake via a carbon-concentrating mechanism, without altering the microstructure. Our findings suggest that calcium-modified diatoms hold potential as a nature-inspired delivery system for immunotherapy through antibody-specific binding.
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Affiliation(s)
- Asrizal Abdul Rahman
- CÚRAM,
SFI Research Centre for Medical Devices, University of Galway, Galway H91 W2TY, Ireland
| | - Isma Liza Mohd Isa
- CÚRAM,
SFI Research Centre for Medical Devices, University of Galway, Galway H91 W2TY, Ireland
- Department of Anatomy, Faculty of Medicine, Universiti Kebangsaan Malaysia, 56000 Cheras, Kuala Lumpur, Malaysia
| | - Syed A. M. Tofail
- Materials
and Surface Science Institute, University
of Limerick, Limerick V94 T9PX, Ireland
| | - Lukasz Bartlomiej
- Conway
Institute of Biomolecular and Biomedical Research and School of Physics, University College Dublin, Dublin 4, Ireland
| | - Brian J. Rodriguez
- Conway
Institute of Biomolecular and Biomedical Research and School of Physics, University College Dublin, Dublin 4, Ireland
| | - Manus J. Biggs
- CÚRAM,
SFI Research Centre for Medical Devices, University of Galway, Galway H91 W2TY, Ireland
| | - Abhay Pandit
- CÚRAM,
SFI Research Centre for Medical Devices, University of Galway, Galway H91 W2TY, Ireland
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Gilmour KA, Ghimire PS, Wright J, Haystead J, Dade-Robertson M, Zhang M, James P. Microbially induced calcium carbonate precipitation through CO 2 sequestration via an engineered Bacillus subtilis. Microb Cell Fact 2024; 23:168. [PMID: 38858761 PMCID: PMC11163794 DOI: 10.1186/s12934-024-02437-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2024] [Accepted: 05/23/2024] [Indexed: 06/12/2024] Open
Abstract
BACKGROUND Microbially induced calcium carbonate precipitation has been extensively researched for geoengineering applications as well as diverse uses within the built environment. Bacteria play a crucial role in producing calcium carbonate minerals, via enzymes including carbonic anhydrase-an enzyme with the capability to hydrolyse CO2, commonly employed in carbon capture systems. This study describes previously uncharacterised carbonic anhydrase enzyme sequences capable of sequestering CO2 and subsequentially generating CaCO3 biominerals and suggests a route to produce carbon negative cementitious materials for the construction industry. RESULTS Here, Bacillus subtilis was engineered to recombinantly express previously uncharacterised carbonic anhydrase enzymes from Bacillus megaterium and used as a whole cell catalyst allowing this novel bacterium to sequester CO2 and convert it to calcium carbonate. A significant decrease in CO2 was observed from 3800 PPM to 820 PPM upon induction of carbonic anhydrase and minerals recovered from these experiments were identified as calcite and vaterite using X-ray diffraction. Further experiments mixed the use of this enzyme (as a cell free extract) with Sporosarcina pasteurii to increase mineral production whilst maintaining a comparable level of CO2 sequestration. CONCLUSION Recombinantly produced carbonic anhydrase successfully sequestered CO2 and converted it into calcium carbonate minerals using an engineered microbial system. Through this approach, a process to manufacture cementitious materials with carbon sequestration ability could be developed.
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Affiliation(s)
- Katie A Gilmour
- Living Construction Group, Hub for Biotechnology in the Built Environment, Department of Applied Sciences, Northumbria University at Newcastle, Newcastle, NE1 8ST, UK
| | - Prakriti Sharma Ghimire
- Living Construction Group, Hub for Biotechnology in the Built Environment, Department of Applied Sciences, Northumbria University at Newcastle, Newcastle, NE1 8ST, UK
| | - Jennifer Wright
- Living Construction Group, Hub for Biotechnology in the Built Environment, Department of Applied Sciences, Northumbria University at Newcastle, Newcastle, NE1 8ST, UK
- Hub for Biotechnology in the Built Environment, School of Architecture, Planning and Landscape, Newcastle University, Newcastle, NE1 7RU, UK
- Diosynth Biotechnologies, FUJIFILM, Billingham, TS23 1LH, UK
| | - Jamie Haystead
- Living Construction Group, Hub for Biotechnology in the Built Environment, Department of Applied Sciences, Northumbria University at Newcastle, Newcastle, NE1 8ST, UK
| | - Martyn Dade-Robertson
- Hub for Biotechnology in the Built Environment, School of Architecture, Planning and Landscape, Newcastle University, Newcastle, NE1 7RU, UK
- Living Construction Group, Hub for Biotechnology in the Built Environment, Department of Architecture and Built Environment, Northumbria University at Newcastle, Newcastle, NE1 8ST, UK
| | - Meng Zhang
- Living Construction Group, Hub for Biotechnology in the Built Environment, Department of Applied Sciences, Northumbria University at Newcastle, Newcastle, NE1 8ST, UK.
| | - Paul James
- Living Construction Group, Hub for Biotechnology in the Built Environment, Department of Applied Sciences, Northumbria University at Newcastle, Newcastle, NE1 8ST, UK.
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Abstract
Living systems are built from a small subset of the atomic elements, including the bulk macronutrients (C,H,N,O,P,S) and ions (Mg,K,Na,Ca) together with a small but variable set of trace elements (micronutrients). Here, we provide a global survey of how chemical elements contribute to life. We define five classes of elements: those that are (i) essential for all life, (ii) essential for many organisms in all three domains of life, (iii) essential or beneficial for many organisms in at least one domain, (iv) beneficial to at least some species, and (v) of no known beneficial use. The ability of cells to sustain life when individual elements are absent or limiting relies on complex physiological and evolutionary mechanisms (elemental economy). This survey of elemental use across the tree of life is encapsulated in a web-based, interactive periodic table that summarizes the roles chemical elements in biology and highlights corresponding mechanisms of elemental economy.
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Affiliation(s)
- Kaleigh A Remick
- Department of Microbiology, Cornell University, New York, NY, United States
| | - John D Helmann
- Department of Microbiology, Cornell University, New York, NY, United States.
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Zhao K, Schäfer A, Zhang Z, Elsässer K, Culmsee C, Zhong L, Pagenstecher A, Nimsky C, Bartsch JW. Inhibition of Carbonic Anhydrase 2 Overcomes Temozolomide Resistance in Glioblastoma Cells. Int J Mol Sci 2021; 23:157. [PMID: 35008590 PMCID: PMC8745118 DOI: 10.3390/ijms23010157] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2021] [Revised: 12/21/2021] [Accepted: 12/22/2021] [Indexed: 12/15/2022] Open
Abstract
About 95% of Glioblastoma (GBM) patients experience tumor relapse as a consequence of resistance to the first-line standard chemotherapy using temozolomide (TMZ). Recent studies reported consistently elevated expression levels of carbonic anhydrase CA2 in recurrent glioblastoma and temozolomide-resistant glioblastoma stem-like cells (GSCs). Here we show that CA2 is preferentially expressed in GSCs and upregulated by TMZ treatment. When expressed in GBM cell lines, CA2 exerts significant metabolic changes reflected by enhanced oxygen consumption and increased extracellular acidification causing higher rates of cell invasion. Notably, GBM cells expressing CA2 respond to combined treatment with TMZ and brinzolamide (BRZ), a non-toxic and potent CA2 inhibitor. Interestingly, brinzolamide was more effective than the pan-CA inhibitor Acetazolamide (ACZ) to sensitize naïve GSCs and TMZ-resistant GSCs to TMZ induced cell death. Mechanistically, we demonstrated that the combined treatment of GBM stem cells with TMZ and BRZ caused autophagy of GBM cell lines and GSCs, reflected by enhanced LC3 cleavage (LC3-II) and p62 reduction. Our findings illustrate the potential of CA2 as a chemo-sensitizing drug target in recurrent GBM and propose a combined treatment of TMZ with CA2 inhibitor to tackle GBM chemoresistance and recurrence.
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Affiliation(s)
- Kai Zhao
- Department of Neurosurgery, Uniklinikum Giessen and Marburg (UKGM), University of Marburg, Baldingerstraße, 35033 Marburg, Germany; (K.Z.); (A.S.); (Z.Z.); (C.N.)
| | - Agnes Schäfer
- Department of Neurosurgery, Uniklinikum Giessen and Marburg (UKGM), University of Marburg, Baldingerstraße, 35033 Marburg, Germany; (K.Z.); (A.S.); (Z.Z.); (C.N.)
| | - Zhuo Zhang
- Department of Neurosurgery, Uniklinikum Giessen and Marburg (UKGM), University of Marburg, Baldingerstraße, 35033 Marburg, Germany; (K.Z.); (A.S.); (Z.Z.); (C.N.)
| | - Katharina Elsässer
- Department of Pharmacology and Clinical Pharmacology, Biochemical-Pharmacological Center, University of Marburg, Karl-von-Frisch-Strasse 2, 35032 Marburg, Germany; (K.E.); (C.C.)
| | - Carsten Culmsee
- Department of Pharmacology and Clinical Pharmacology, Biochemical-Pharmacological Center, University of Marburg, Karl-von-Frisch-Strasse 2, 35032 Marburg, Germany; (K.E.); (C.C.)
- Center for Mind, Brain and Behavior, 35032 Marburg, Germany;
| | - Li Zhong
- College of Bioengineering, Chongqing University, Shazheng Street 174, Shapingba District, Chongqing 400044, China;
| | - Axel Pagenstecher
- Center for Mind, Brain and Behavior, 35032 Marburg, Germany;
- Department of Neuropathology, Uniklinikum Giessen and Marburg (UKGM), University of Marburg, Baldingerstraße, 35033 Marburg, Germany
| | - Christopher Nimsky
- Department of Neurosurgery, Uniklinikum Giessen and Marburg (UKGM), University of Marburg, Baldingerstraße, 35033 Marburg, Germany; (K.Z.); (A.S.); (Z.Z.); (C.N.)
- Center for Mind, Brain and Behavior, 35032 Marburg, Germany;
| | - Jörg W. Bartsch
- Department of Neurosurgery, Uniklinikum Giessen and Marburg (UKGM), University of Marburg, Baldingerstraße, 35033 Marburg, Germany; (K.Z.); (A.S.); (Z.Z.); (C.N.)
- Center for Mind, Brain and Behavior, 35032 Marburg, Germany;
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