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Kanapiya A, Amanbayeva U, Tulegenova Z, Abash A, Zhangazin S, Dyussembayev K, Mukiyanova G. Recent advances and challenges in plant viral diagnostics. FRONTIERS IN PLANT SCIENCE 2024; 15:1451790. [PMID: 39193213 PMCID: PMC11347306 DOI: 10.3389/fpls.2024.1451790] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/19/2024] [Accepted: 07/24/2024] [Indexed: 08/29/2024]
Abstract
Accurate and timely diagnosis of plant viral infections plays a key role in effective disease control and maintaining agricultural productivity. Recent advances in the diagnosis of plant viruses have significantly expanded our ability to detect and monitor viral pathogens in agricultural crops. This review discusses the latest advances in diagnostic technologies, including both traditional methods and the latest innovations. Conventional methods such as enzyme-linked immunosorbent assay and DNA amplification-based assays remain widely used due to their reliability and accuracy. However, diagnostics such as next-generation sequencing and CRISPR-based detection offer faster, more sensitive and specific virus detection. The review highlights the main advantages and limitations of detection systems used in plant viral diagnostics including conventional methods, biosensor technologies and advanced sequence-based techniques. In addition, it also discusses the effectiveness of commercially available diagnostic tools and challenges facing modern diagnostic techniques as well as future directions for improving informed disease management strategies. Understanding the main features of available diagnostic methodologies would enable stakeholders to choose optimal management strategies against viral threats and ensure global food security.
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Affiliation(s)
- Aizada Kanapiya
- Department of Biotechnology and Microbiology, L.N. Gumilyov Eurasian National University, Astana, Kazakhstan
| | - Ulbike Amanbayeva
- Laboratory of Biodiversity and Genetic Resources, National Center for Biotechnology, Astana, Kazakhstan
| | - Zhanar Tulegenova
- Department of Biotechnology and Microbiology, L.N. Gumilyov Eurasian National University, Astana, Kazakhstan
- Laboratory of Biodiversity and Genetic Resources, National Center for Biotechnology, Astana, Kazakhstan
| | - Altyngul Abash
- Department of Biotechnology and Microbiology, L.N. Gumilyov Eurasian National University, Astana, Kazakhstan
| | - Sayan Zhangazin
- Department of Biotechnology and Microbiology, L.N. Gumilyov Eurasian National University, Astana, Kazakhstan
| | - Kazbek Dyussembayev
- Department of Biotechnology and Microbiology, L.N. Gumilyov Eurasian National University, Astana, Kazakhstan
- Laboratory of Biodiversity and Genetic Resources, National Center for Biotechnology, Astana, Kazakhstan
| | - Gulzhamal Mukiyanova
- Laboratory of Biodiversity and Genetic Resources, National Center for Biotechnology, Astana, Kazakhstan
- Scientific Center "Agrotechnopark", Shakarim University, Semey, Kazakhstan
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Xu XJ, Sun XJ, Liu CJ, Chen XZ, Zhu Q, Tian YP, Li XD. Development of an attenuated potato virus Y mutant carrying multiple mutations in helper-component protease for cross-protection. Virus Res 2024; 344:199369. [PMID: 38608732 PMCID: PMC11035042 DOI: 10.1016/j.virusres.2024.199369] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2024] [Revised: 04/06/2024] [Accepted: 04/10/2024] [Indexed: 04/14/2024]
Abstract
Tobacco (Nicotiana tabacum) is one of the major cash crops in China. Potato virus Y (PVY), a representative member of the genus Potyvirus, greatly reduces the quality and yield of tobacco leaves by inducing veinal necrosis. Mild strain-mediated cross-protection is an attractive method of controlling diseases caused by PVY. Currently, there is a lack of effective and stable attenuated PVY mutants. Potyviral helper component-protease (HC-Pro) is a likely target for the development of mild strains. Our previous studies showed that the residues lysine at positions 124 and 182 (K124 and K182) in HC-Pro were involved in PVY virulence, and the conserved KITC motif in HC-Pro was involved in aphid transmission. In this study, to improve the stability of PVY mild strains, K at position 50 (K50) in KITC motif, K124, and K182 were separately substituted with glutamic acid (E), leucine (L), and arginine (R), resulting in a triple-mutant PVY-HCELR. The mutant PVY-HCELR had attenuated virulence and did not induce leaf veinal necrosis symptoms in tobacco plants and could not be transmitted by Myzus persicae. Furthermore, PVY-HCELR mutant was genetically stable after six serial passages, and only caused mild mosaic symptoms in tobacco plants even at 90 days post inoculation. The tobacco plants cross-protected by PVY-HCELR mutant showed high resistance to the wild-type PVY. This study showed that PVY-HCELR mutant was a promising mild mutant for cross-protection to control PVY.
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Affiliation(s)
- Xiao-Jie Xu
- The Engineering Research Institute of Agriculture and Forestry, Ludong University, Yantai, Shandong 264025, China; Laboratory of Plant Virology, Department of Plant Pathology, College of Plant Protection, Shandong Agricultural University, Tai'an, Shandong 271018, China
| | - Xu-Jie Sun
- Laboratory of Plant Virology, Department of Plant Pathology, College of Plant Protection, Shandong Agricultural University, Tai'an, Shandong 271018, China
| | - Chun-Ju Liu
- Weifang Tobacco Corporation, Weifang, Shandong 261031, China
| | - Xiu-Zhai Chen
- Linyi Tobacco Corporation, Linyi, Shandong 276000, China
| | - Qing Zhu
- Laboratory of Plant Virology, Department of Plant Pathology, College of Plant Protection, Shandong Agricultural University, Tai'an, Shandong 271018, China
| | - Yan-Ping Tian
- Laboratory of Plant Virology, Department of Plant Pathology, College of Plant Protection, Shandong Agricultural University, Tai'an, Shandong 271018, China.
| | - Xiang-Dong Li
- Laboratory of Plant Virology, Department of Plant Pathology, College of Plant Protection, Shandong Agricultural University, Tai'an, Shandong 271018, China.
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Bhatt S, Pathak R, Punetha VD, Punetha M. Chitosan nanocomposites as a nano-bio tool in phytopathogen control. Carbohydr Polym 2024; 331:121858. [PMID: 38388036 DOI: 10.1016/j.carbpol.2024.121858] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2023] [Revised: 01/06/2024] [Accepted: 01/21/2024] [Indexed: 02/24/2024]
Abstract
Chitosan, an economically viable and versatile biopolymer, exhibits a wide array of advantageous physicochemical and biological properties. Chitosan nanocomposites, formed by the amalgamation of chitosan or chitosan nanoparticles with other nanoparticles or materials, have garnered extensive attention across agricultural, pharmaceutical, and biomedical domains. These nanocomposites have been rigorously investigated due to their diverse applications, notably in combatting plant pathogens. Their remarkable efficacy against phytopathogens has positioned them as a promising alternative to conventional chemical-based methods in phytopathogen control, thus exploring interest in sustainable agricultural practices with reduced reliance on chemical interventions. This review aims to highlight the anti-phytopathogenic activity of chitosan nanocomposites, emphasizing their potential in mitigating plant diseases. Additionally, it explores various synthesis methods for chitosan nanoparticles to enhance readers' understanding. Furthermore, the analysis delves into elucidating the intricate mechanisms governing the antimicrobial effectiveness of these composites against bacterial and fungal phytopathogens.
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Affiliation(s)
- Shalini Bhatt
- 2D Materials and LASER Actuation Laboratory, Centre of Excellence for Research, PP Savani University, Surat 394125, Gujarat, India.
| | - Rakshit Pathak
- 2D Materials and LASER Actuation Laboratory, Centre of Excellence for Research, PP Savani University, Surat 394125, Gujarat, India
| | - Vinay Deep Punetha
- 2D Materials and LASER Actuation Laboratory, Centre of Excellence for Research, PP Savani University, Surat 394125, Gujarat, India
| | - Mayank Punetha
- 2D Materials and LASER Actuation Laboratory, Centre of Excellence for Research, PP Savani University, Surat 394125, Gujarat, India
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Zhang F, Wen S, Wang B, Zhang Z, Liu F, Ye T, Wang K, Hu H, Yang X, Fang W. Biocontrol Potential of Streptomyces odonnellii SZF-179 toward Alternaria alternata to Control Pear Black Spot Disease. Int J Mol Sci 2023; 24:17515. [PMID: 38139343 PMCID: PMC10744222 DOI: 10.3390/ijms242417515] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2023] [Revised: 12/04/2023] [Accepted: 12/13/2023] [Indexed: 12/24/2023] Open
Abstract
Pear black spot disease, caused by Alternaria alternata, is a devastating disease in pears and leads to enormous economic losses worldwide. In this investigation, we isolated a Streptomyces odonnellii SZF-179 from the rhizosphere soil of pear plants in China. Indoor confrontation experiments results showed that both SZF-179 and its aseptic filtrate had excellent inhibitory effects against A. alternata. Afterwards, the main antifungal compound of SZF-179 was identified as polyene, with thermal and pH stability in the environment. A microscopic examination of A. alternata mycelium showed severe morphological abnormalities caused by SZF-179. Protective studies showed that SZF-179 fermentation broth could significantly reduce the diameter of the necrotic lesions on pear leaves by 42.25%. Furthermore, the potential of fermentation broth as a foliar treatment to control black leaf spot was also evaluated. Disease indexes of 'Hosui' and 'Wonwhang' pear plants treated with SZF-179 fermentation broth were lower than that of control plants. Overall, SZF-179 is expected to be developed into a safe and broad-spectrum biocontrol agent. No studies to date have evaluated the utility of S. odonnellii for the control of pear black spot disease; our study fills this research gap. Collectively, our findings provide new insights that will aid the control of pear black spot disease, as well as future studies of S. odonnellii strains.
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Affiliation(s)
- Fei Zhang
- National Biopesticide Engineering Research Centre, Hubei Biopesticide Engineering Research Centre, Hubei Academy of Agricultural Sciences, Wuhan 430064, China; (F.Z.); (S.W.)
| | - Shaohua Wen
- National Biopesticide Engineering Research Centre, Hubei Biopesticide Engineering Research Centre, Hubei Academy of Agricultural Sciences, Wuhan 430064, China; (F.Z.); (S.W.)
| | - Beibei Wang
- National Biopesticide Engineering Research Centre, Hubei Biopesticide Engineering Research Centre, Hubei Academy of Agricultural Sciences, Wuhan 430064, China; (F.Z.); (S.W.)
| | - Zhe Zhang
- National Biopesticide Engineering Research Centre, Hubei Biopesticide Engineering Research Centre, Hubei Academy of Agricultural Sciences, Wuhan 430064, China; (F.Z.); (S.W.)
| | - Fang Liu
- National Biopesticide Engineering Research Centre, Hubei Biopesticide Engineering Research Centre, Hubei Academy of Agricultural Sciences, Wuhan 430064, China; (F.Z.); (S.W.)
| | - Ting Ye
- National Biopesticide Engineering Research Centre, Hubei Biopesticide Engineering Research Centre, Hubei Academy of Agricultural Sciences, Wuhan 430064, China; (F.Z.); (S.W.)
| | - Kaimei Wang
- National Biopesticide Engineering Research Centre, Hubei Biopesticide Engineering Research Centre, Hubei Academy of Agricultural Sciences, Wuhan 430064, China; (F.Z.); (S.W.)
- Hubei Hongshan Laboratory, Wuhan 430070, China
| | - Hongju Hu
- Hubei Hongshan Laboratory, Wuhan 430070, China
- Hubei Key Laboratory of Germplasm Innovation and Utilization of Fruit Trees, Research Institute of Fruit and Tea, Hubei Academy of Agricultural Science, Wuhan 430064, China
| | - Xiaoping Yang
- Hubei Key Laboratory of Germplasm Innovation and Utilization of Fruit Trees, Research Institute of Fruit and Tea, Hubei Academy of Agricultural Science, Wuhan 430064, China
| | - Wei Fang
- National Biopesticide Engineering Research Centre, Hubei Biopesticide Engineering Research Centre, Hubei Academy of Agricultural Sciences, Wuhan 430064, China; (F.Z.); (S.W.)
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Xiang S, Wang X, Peng S, Kang X, Wang J, Peng L, Ma X, Huang J, Sun X. Washout-Resistant, pH-Responsive Anti-TMV Nanoimmune Inducer Based on Cellulose Nanocrystals. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2023; 71:16542-16553. [PMID: 37877141 DOI: 10.1021/acs.jafc.3c05733] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/26/2023]
Abstract
The application of antiplant virus agents on leaf surfaces faces challenges due to their vulnerability to wear, instability, and limited duration, which in turn jeopardizes plant health and yield. In recent years, high-aspect-ratio nanomaterials have gained prominence as powerful carriers for disease treatment, thanks to their exceptional penetrability and precise drug delivery capabilities. Here, we synthesized a pH-responsive nanoimmune inducer (CNC-AMO) with strong leaf adhesion through a Schiff base reaction, achieved by grafting amino-oligosaccharides (AMOs) on the surface of aldehyde-based CNC (CNC-CHO). Fourier transform infrared spectrometry, zeta potential, X-ray photoelectron spectroscopy, X-ray diffraction, transmission electron microscopy, atomic force microscopy, scanning electron microscopy, thermogravimetric analysis, and elemental analysis were used to characterize the CNC-AMO. The CNC-AMO displayed the capability for pH-responsive AMO release, showcasing its potential for targeted and controlled delivery. When applied to plants, the CNC-AMO exhibited impressive anti-TMV efficacy during a weeklong observation period. Meanwhile, the CNC-AMO exhibited remarkable adhesion and scouring resistance on the surfaces of the plant leaves. We strongly believe that the synergy of environmentally friendly synthetic materials, efficient plant virus control, and streamlined scalability positions CNC-AMOs as a promising pesticide for plant virus therapy.
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Affiliation(s)
- Shunyu Xiang
- College of Plant Protection, Southwest University, Chongqing 400715, China
- Chongqing Key Laboratory of Soft-Matter Material Chemistry and Function Manufacturing, Southwest University, Chongqing 400715, China
| | - Xiaoyan Wang
- College of Plant Protection, Southwest University, Chongqing 400715, China
| | - Shiqi Peng
- College of Plant Protection, Southwest University, Chongqing 400715, China
| | - Xinke Kang
- School of Minerals Processing and Bioengineering, Central South University, Changsha 410083, China
| | - Jing Wang
- College of Plant Protection, Southwest University, Chongqing 400715, China
| | - Liyuan Peng
- College of Plant Protection, Southwest University, Chongqing 400715, China
| | - Xiaozhou Ma
- College of Plant Protection, Southwest University, Chongqing 400715, China
- Chongqing Key Laboratory of Soft-Matter Material Chemistry and Function Manufacturing, Southwest University, Chongqing 400715, China
| | - Jin Huang
- School of Chemistry and Chemical Engineering, Southwest University, Chongqing 400715, China
- Chongqing Key Laboratory of Soft-Matter Material Chemistry and Function Manufacturing, Southwest University, Chongqing 400715, China
| | - Xianchao Sun
- College of Plant Protection, Southwest University, Chongqing 400715, China
- Chongqing Key Laboratory of Soft-Matter Material Chemistry and Function Manufacturing, Southwest University, Chongqing 400715, China
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Apostolova EL. Molecular Mechanisms of Plant Defense against Abiotic Stress. Int J Mol Sci 2023; 24:10339. [PMID: 37373486 DOI: 10.3390/ijms241210339] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2023] [Accepted: 06/08/2023] [Indexed: 06/29/2023] Open
Abstract
The climatic changes and anthropogenic factors in recent decades (global warming, drought, salinity, extreme temperature, environmental pollution) have led to an increase in the negative impact of environmental factors on plants. Abiotic stress strongly influences the important processes of plants and thus affects their growth and development. The effects of stressors on the plants depend on the intensity, frequency, and duration of stress, plant species as well as a combination of various stressors. Plants have developed different mechanisms to limit adverse environmental conditions. In the publications in this Special Issue, Molecular Mechanisms of Plant Defense against Abiotic Stress, new information on plant defense mechanisms against abiotic and biotic stress is presented. The studies help us better understand plants' protection mechanisms again global climate change.
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Affiliation(s)
- Emilia L Apostolova
- Institute of Biophysics and Biomedical Engineering, Bulgarian Academy of Sciences, Acad. G. Bonchev Str., Bl. 21, 1113 Sofia, Bulgaria
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