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[N,N′-Di-tert-butyl-P,P-diphenylphosphinimidic Amidato-κN,κN′]chlorosilicon-κSi-tetracarbonyliron. MOLBANK 2022. [DOI: 10.3390/m1433] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
Abstract
The title complex {[Ph2P(tBuN)2](Cl)Si:->Fe(CO)4} (2) was synthesized via the reaction of chlorosilylene [Ph2P(tBuN)2]SiCl (1), supported by an iminophosphonamide ligand with Fe(CO)5 in THF. The molecular structure of 2 was fully characterized by NMR (1H, 13C, 29Si, and 31P) and IR spectroscopies, as well as single-crystal X-ray diffraction (SCXRD) analysis. In the SCXRD analysis of 2, the silylene ligand was located in the axial positions of the coordination sphere of the central iron atom and other sites were occupied by carbonyl ligands.
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2
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Park YJ, Peñas-Defrutos MN, Drummond MJ, Gordon Z, Kelly OR, Garvey IJ, Gullett KL, García-Melchor M, Fout AR. Secondary Coordination Sphere Influences the Formation of Fe(III)-O or Fe(III)-OH in Nitrite Reduction: A Synthetic and Computational Study. Inorg Chem 2022; 61:8182-8192. [PMID: 35580163 DOI: 10.1021/acs.inorgchem.2c00462] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The reduction of nitrite (NO2-) to generate nitric oxide (NO) is a significant area of research due to their roles in the global nitrogen cycle. Here, we describe various modifications of the tris(5-cyclohexyliminopyrrol-2-ylmethyl)amine H3[N(piR)3] ligand where the steric bulk and acidity of the secondary coordination sphere were explored in the non-heme iron system for nitrite reduction. The cyclohexyl and 2,4,6-trimethylphenyl variants of the ligand were used to probe the mechanism of nitrite reduction. While previously stoichiometric addition of nitrite to the iron(II)-species generated an iron(III)-oxo complex, changing the secondary coordination sphere to mesityl resulted in an iron(III)-hydroxo complex. Subsequent addition of an electron and two protons led to the release of water and regeneration of the starting iron(II) catalyst. This sequence mirrored the proposed mechanism of nitrite reduction in biological systems, where the distal histidine residue shuttles protons to the active site. Computational studies aimed at interrogating the dissimilar behavior of the cyclohexyl and mesityl ligand systems resulting in Fe(III)-oxo and Fe(III)-hydroxo complexes, respectively, shed light on the key role of H-bonds involving the secondary coordination sphere in the relative stability of these species.
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Affiliation(s)
- Yun Ji Park
- School of Chemical Sciences, University of Illinois at Urbana-Champaign, 600 S. Mathews Avenue, Urbana, Illinois 61801, United States
| | - Marconi N Peñas-Defrutos
- School of Chemistry, CRANN and AMBER Research Centres, Trinity College Dublin, College Green, Dublin 2, Ireland
| | - Michael J Drummond
- School of Chemical Sciences, University of Illinois at Urbana-Champaign, 600 S. Mathews Avenue, Urbana, Illinois 61801, United States
| | - Zachary Gordon
- School of Chemical Sciences, University of Illinois at Urbana-Champaign, 600 S. Mathews Avenue, Urbana, Illinois 61801, United States
| | - Oscar R Kelly
- School of Chemistry, CRANN and AMBER Research Centres, Trinity College Dublin, College Green, Dublin 2, Ireland
| | - Ian J Garvey
- School of Chemical Sciences, University of Illinois at Urbana-Champaign, 600 S. Mathews Avenue, Urbana, Illinois 61801, United States
| | - Kelly L Gullett
- School of Chemical Sciences, University of Illinois at Urbana-Champaign, 600 S. Mathews Avenue, Urbana, Illinois 61801, United States
| | - Max García-Melchor
- School of Chemistry, CRANN and AMBER Research Centres, Trinity College Dublin, College Green, Dublin 2, Ireland
| | - Alison R Fout
- School of Chemical Sciences, University of Illinois at Urbana-Champaign, 600 S. Mathews Avenue, Urbana, Illinois 61801, United States
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Benedetti M, De Castro F, Papadia P, Antonucci D, Fanizzi FP. 195
Pt and
15
N NMR Data in Square Planar Platinum(II) Complexes of the Type [Pt(NH
3
)
a
X
b
]
n
(X
b
= Combination of Halides): “
NMR Effective Molecular Radius
” of Coordinated Ammonia. Eur J Inorg Chem 2020. [DOI: 10.1002/ejic.202000474] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Michele Benedetti
- Department of Biological and Environmental Sciences and Technologies (DiSTeBA), Università del Salento Via Monteroni 73100 Lecce Italy
| | - Federica De Castro
- Department of Biological and Environmental Sciences and Technologies (DiSTeBA), Università del Salento Via Monteroni 73100 Lecce Italy
| | - Paride Papadia
- Department of Biological and Environmental Sciences and Technologies (DiSTeBA), Università del Salento Via Monteroni 73100 Lecce Italy
| | - Daniela Antonucci
- Department of Biological and Environmental Sciences and Technologies (DiSTeBA), Università del Salento Via Monteroni 73100 Lecce Italy
| | - Francesco P. Fanizzi
- Department of Biological and Environmental Sciences and Technologies (DiSTeBA), Università del Salento Via Monteroni 73100 Lecce Italy
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Neugebauer M, Schmitz S, Brünink D, Doltsinis NL, Klein A. Dynamics of the efficient cyclometalation of the undercoordinated organoplatinum complex [Pt(COD)(neoPh)] + (neoPh = 2-methyl-2-phenylpropyl). NEW J CHEM 2020. [DOI: 10.1039/d0nj04811a] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Abstract
The cyclometalation reaction of [Pt(COD)(κ1-neoPh)]+ (neoPh = 2-methyl-2-phenylpropyl) to [Pt(COD)(κ2-neoPh)] was studied experimentally and mechanistically using DFT and MD simulations.
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Affiliation(s)
- Michael Neugebauer
- University of Cologne
- Department of Chemistry
- Institute for Inorganic Chemistry
- D-50939 Cologne
- Germany
| | - Simon Schmitz
- University of Cologne
- Department of Chemistry
- Institute for Inorganic Chemistry
- D-50939 Cologne
- Germany
| | - Dana Brünink
- Westfälische Wilhelms-Universität Münster
- Institut für Festkörpertheorie and Center for Multiscale Theory and Computation
- 48149 Münster
- Germany
| | - Nikos L. Doltsinis
- Westfälische Wilhelms-Universität Münster
- Institut für Festkörpertheorie and Center for Multiscale Theory and Computation
- 48149 Münster
- Germany
| | - Axel Klein
- University of Cologne
- Department of Chemistry
- Institute for Inorganic Chemistry
- D-50939 Cologne
- Germany
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Reaction with Proteins of a Five-Coordinate Platinum(II) Compound. Int J Mol Sci 2019; 20:ijms20030520. [PMID: 30691130 PMCID: PMC6387405 DOI: 10.3390/ijms20030520] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2018] [Revised: 01/21/2019] [Accepted: 01/23/2019] [Indexed: 02/08/2023] Open
Abstract
Stable five-coordinate Pt(II) complexes have been highlighted as a promising and original platform for the development of new cytotoxic drugs. Their interaction with proteins has been scarcely studied. Here, the reactivity of the five-coordinate Pt(II) compound [Pt(I)(Me) (dmphen)(olefin)] (Me = methyl, dmphen = 2,9-dimethyl-1,10-phenanthroline, olefin = dimethylfumarate) with the model proteins hen egg white lysozyme (HEWL) and bovine pancreatic ribonuclease (RNase A) has been investigated by X-ray crystallography and electrospray ionization mass spectrometry. The X-ray structures of the adducts of RNase A and HEWL with [Pt(I)(Me)(dmphen)(olefin)] are not of very high quality, but overall data indicate that, upon reaction with RNase A, the compound coordinates the side chain of His105 upon releasing the iodide ligand, but retains the pentacoordination. On the contrary, upon reaction with HEWL, the trigonal bi-pyramidal Pt geometry is lost, the iodide and the olefin ligands are released, and the metal center coordinates the side chain of His15 probably adopting a nearly square-planar geometry. This work underlines the importance of the combined use of crystallographic and mass spectrometry techniques to characterize, in detail, the protein–metallodrug recognition process. Our findings also suggest that five-coordinate Pt(II) complexes can act either retaining their uncommon structure or functioning as prodrugs, i.e., releasing square-planar platinum complexes as bioactive species.
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Neugebauer M, Schmitz S, Krause M, L. Doltsinis N, Klein A. Reactions of the organoplatinum complex [Pt(cod) (neoSi)Cl] (neoSi = trimethylsilylmethyl) with the non-coordinating anions SbF6– and BPh4–. OPEN CHEM 2018. [DOI: 10.1515/chem-2018-0130] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
AbstractReactions of the organoplatinum complex [Pt(cod)(neoSi)Cl] (neoSi = (trimethylsilylmethyl) with the Ag(I) salts of oxo or fluoride containing anions A– = NO3–, ClO4–, OTf – (trifluoromethanesulfonate) and SbF6– lead to the desired abstraction of the chlorido ligand and precipitation of AgCl. However, further reaction of the resulting Pt complexes [Pt(cod)(neoSi) (solvent)]+ with diverse N-heterocyclic ligands L such as pyridines, caffeine, and guanine did not yield the targeted complexes [Pt(cod)(neoSi)(L)](A) in most of the cases, but to extensive decomposition yielding [Pt(cod)(Me) (solvent)]+, thus transforming the neoSi into a methyl ligand. A detailed study on the reaction with SbF6– combining DFT calculations with NMR and MS revealed that Pt catalysed decomposition of SbF6‒ and fluorination of the neoSi silicon atom leading to FSiMe3. When reacting the parent complex with Ag(BPh4), the arylated derivative [Pt(cod)(neoSi)(Ph)] was obtained and characterised by multinuclear NMR, MS and single crystal XRD.
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Affiliation(s)
- Michael Neugebauer
- Universität zu Köln, Department für Chemie, Institut für Anorganische Chemie Greinstraße 6, D-50939Köln, Germany
| | - Simon Schmitz
- Universität zu Köln, Department für Chemie, Institut für Anorganische Chemie Greinstraße 6, D-50939Köln, Germany
| | - Maren Krause
- Universität zu Köln, Department für Chemie, Institut für Anorganische Chemie Greinstraße 6, D-50939Köln, Germany
| | - Nikos L. Doltsinis
- Westfälische Wilhelms-Universität Münster, Institut für Festkörpertheorie and Center for Multiscale Theory and Computation, Wilhelm-Klemm-Straße 10, 48149Münster, Germany
| | - Axel Klein
- Universität zu Köln, Department für Chemie, Institut für Anorganische Chemie Greinstraße 6, D-50939Köln, Germany
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Efficient copper-based DNA cleavers from carboxylate benzimidazole ligands. J Biol Inorg Chem 2018; 23:1165-1183. [PMID: 30076466 DOI: 10.1007/s00775-018-1598-9] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2018] [Accepted: 07/18/2018] [Indexed: 12/13/2022]
Abstract
Four copper(II) coordination compounds from 2-benzimidazole propionic acid (Hbzpr) and 4-(benzimidazol-2-yl)-3-thiobutanoic acid (Hbztb) were synthesized and fully characterized by elemental analyses, electronic spectroscopy, FT-IR and mass spectrometry. The molecular structure for the four complexes was confirmed by single-crystal X-ray crystallography. The DNA-interacting properties of the two trinuclear and two mononuclear compounds were investigated using different spectroscopic techniques including absorption titration experiments, fluorescence spectroscopy and circular dichroism spectroscopy. Trinuclear [Cu3(bzpr)4(H2O)2](NO3)2·3H2O·CH3OH (2) and [Cu3(bzpr)4Cl2]·3H2O (3) bind to DNA through non-intercalative interactions, while for mononuclear [Cu(bzpr)2(H2O)]·2H2O (1) and [Cu(bztb)2]·2H2O (4), at minor concentrations in relation to the DNA, a groove binding interaction is favored, while at higher concentrations an intercalative mode is preferred. The nuclease properties of all complexes were studied by gel electrophoresis, which showed that they were able to cleave supercoiled plasmid DNA (form I) to the nicked form (form II). Compound 4 is even capable of generating linear form III (resulting from double-strand cleavage). The proposed mechanism of action involves an oxidative pathway (Fenton-type reaction), which produces harmful reactive species, like hydroxyl radicals.
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Wandler AEE, Koos MRM, Nieger M, Luy B, Bräse S. 1,5-Cyclooctadienyl alcohols and ketones generate a new class of COD Pt complexes. Dalton Trans 2018; 47:3689-3692. [DOI: 10.1039/c8dt00075a] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
Abstract
A variety of new racemic alcohol and ketone cyclooctadiene derivatives was prepared for their complexation with platinum to generate a new class of platinum(ii) complexes.
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Affiliation(s)
- Angela E. E. Wandler
- Institute of Organic Chemistry
- Karlsruhe Institute of Technology (KIT)
- 76131 Karlsruhe
- Germany
| | - Martin R. M. Koos
- Institute of Organic Chemistry
- Karlsruhe Institute of Technology (KIT)
- 76131 Karlsruhe
- Germany
- Institute for Biological Interfaces 4 – Magnetic Resonance
| | - Martin Nieger
- Department of Chemistry
- University of Helsinki
- Finland
| | - Burkhard Luy
- Institute of Organic Chemistry
- Karlsruhe Institute of Technology (KIT)
- 76131 Karlsruhe
- Germany
- Institute for Biological Interfaces 4 – Magnetic Resonance
| | - Stefan Bräse
- Institute of Organic Chemistry
- Karlsruhe Institute of Technology (KIT)
- 76131 Karlsruhe
- Germany
- Institute of Toxicology and Genetics
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9
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Castro-Ramírez R, Ortiz-Pastrana N, Caballero AB, Zimmerman MT, Stadelman BS, Gaertner AAE, Brumaghim JL, Korrodi-Gregório L, Pérez-Tomás R, Gamez P, Barba-Behrens N. DNA interactions of non-chelating tinidazole-based coordination compounds and their structural, redox and cytotoxic properties. Dalton Trans 2018; 47:7551-7560. [DOI: 10.1039/c8dt00716k] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
Abstract
DNA interactions of novel tinidazole CuII complexes.
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Affiliation(s)
- Rodrigo Castro-Ramírez
- Departamento de Química Inorgánica
- Facultad de Química
- Universidad Nacional Autónoma de México
- Ciudad Universitaria
- Ciudad de México
| | | | - Ana B. Caballero
- Departament de Química Inorgànica
- Universitat de Barcelona
- 08028 Barcelona
- Spain
- Institute of Nanoscience and Nanotechnology (IN2UB)
| | | | | | | | | | - Luís Korrodi-Gregório
- Department of Pathology and Experimental Therapeutics
- Faculty of Medicine
- University of Barcelona
- 08907 L'Hospitalet de Llobregat
- Spain
| | - Ricardo Pérez-Tomás
- Department of Pathology and Experimental Therapeutics
- Faculty of Medicine
- University of Barcelona
- 08907 L'Hospitalet de Llobregat
- Spain
| | - Patrick Gamez
- Departament de Química Inorgànica
- Universitat de Barcelona
- 08028 Barcelona
- Spain
- Institució Catalana de Recerca i Estudis Avançats (ICREA)
| | - Norah Barba-Behrens
- Departamento de Química Inorgánica
- Facultad de Química
- Universidad Nacional Autónoma de México
- Ciudad Universitaria
- Ciudad de México
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Lingen V, Lüning A, Krest A, Deacon GB, Schur J, Ott I, Pantenburg I, Meyer G, Klein A. Labile Pd-sulphur and Pt-sulphur bonds in organometallic palladium and platinum complexes [(COD)M(alkyl)(S-ligand)] n+-A speciation study. J Inorg Biochem 2016; 165:119-127. [PMID: 27338203 DOI: 10.1016/j.jinorgbio.2016.06.009] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2016] [Revised: 05/10/2016] [Accepted: 06/03/2016] [Indexed: 01/14/2023]
Abstract
Reaction of various sulphur ligands L (SEt-, SPh-, SC6F4H-4-, SEt2, StBu2, SnBu2, DMSO, DPSO) with the precursors [(COD)M(R)Cl] (COD=1,5-cyclooctadiene, M=Pd or Pt; R=methyl (Me) or benzyl (Bn); DMSO=dimethyl sulfoxide; DPSO=diphenyl sulfoxide) allowed isolation and characterisation of mononuclear neutral (n=0) or cationic (n=1) complexes [(COD)Pt(R)(L)]n+. Reaction of l-cysteine (HCys) with [(COD)Pt(Me)Cl] under similar conditions gave the binuclear cationic complex in [{(COD)Pt(Me)}2(μ-Cys)]Cl. Detailed NMR spectroscopy and single crystal X-ray diffraction in the case of [(COD)Pt(Me)(SEt2)][SbF6] and [(COD)Pt(Me)(DMSO)][SbF6] reveal markedly labilised Pt-S bonds as a consequence of the highly covalent Pt-C bonds of the R coligands in these organometallic species. Cationic charge (n=1) seems to lower the Pt-S bond strength further. Consequently, most of these complexes are not stable long-term in aqueous DMF (N,N-dimethylformamide) solutions. This made the evaluation of their antiproliferative properties towards HT-29 colon carcinoma and MCF-7 breast adenocarcinoma cell lines impossible. Only the two complexes [(COD)Pt(R)(SC6F4H-4)] with R=Me or SC6F4H-4 coligands could be tested with the R=Me complex showing promising activity (in the range of cisplatin), while the R=SC6F4H-4 derivative is largely inactive, as were the phosphane complexes [(dppe)Pt(SC6F4H-4)2] (dppe=1,2-bis(diphenylphosphino)ethane), cis-[(PPh3)2Pt(SC6F4H-4)2] and cis-[(PPh3)2PtCl2] which were tested for comparison. In turn, our findings might pave the way to new Pt anti-cancer drugs with largely reduced unwanted depletion of incorporated drugs and reduced side-effects from binding to S-containing biomolecules.
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Affiliation(s)
- Verena Lingen
- Department of Chemistry, Institute for Inorganic Chemistry, University of Cologne, Greinstrasse 6, D-50939 Cologne, Germany
| | - Anna Lüning
- Department of Chemistry, Institute for Inorganic Chemistry, University of Cologne, Greinstrasse 6, D-50939 Cologne, Germany
| | - Alexander Krest
- Department of Chemistry, Institute for Inorganic Chemistry, University of Cologne, Greinstrasse 6, D-50939 Cologne, Germany
| | - Glen B Deacon
- School of Chemistry, Monash University, PO Box 23, Victoria 3800, Australia
| | - Julia Schur
- Institute of Medicinal and Pharmaceutical Chemistry, Technische Universität Braunschweig, Beethovenstrasse 55, D-38106 Braunschweig, Germany
| | - Ingo Ott
- Institute of Medicinal and Pharmaceutical Chemistry, Technische Universität Braunschweig, Beethovenstrasse 55, D-38106 Braunschweig, Germany
| | - Ingo Pantenburg
- Department of Chemistry, Institute for Inorganic Chemistry, University of Cologne, Greinstrasse 6, D-50939 Cologne, Germany
| | - Gerd Meyer
- Department of Chemistry, Institute for Inorganic Chemistry, University of Cologne, Greinstrasse 6, D-50939 Cologne, Germany
| | - Axel Klein
- Department of Chemistry, Institute for Inorganic Chemistry, University of Cologne, Greinstrasse 6, D-50939 Cologne, Germany.
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