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Di Nardo F, De Marco R, Lucchetti A, Scaradozzi D. A WAV file dataset of bottlenose dolphin whistles, clicks, and pulse sounds during trawling interactions. Sci Data 2023; 10:650. [PMID: 37739950 PMCID: PMC10517007 DOI: 10.1038/s41597-023-02547-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2022] [Accepted: 09/06/2023] [Indexed: 09/24/2023] Open
Abstract
Globally, interactions between fishing activities and dolphins are cause for concern due to their negative effects on both mammals and fishermen. The recording of acoustic emissions could aid in detecting the presence of dolphins in close proximity to fishing gear, elucidating their behavior, and guiding potential management measures designed to limit this harmful phenomenon. This data descriptor presents a dataset of acoustic recordings (WAV files) collected during interactions between common bottlenose dolphins (Tursiops truncatus) and fishing activities in the Adriatic Sea. This dataset is distinguished by the high complexity of its repertoire, which includes various different typologies of dolphin emission. Specifically, a group of free-ranging dolphins was found to emit frequency-modulated whistles, echolocation clicks, and burst pulse signals, including feeding buzzes. An analysis of signal quality based on the signal-to-noise ratio was conducted to validate the dataset. The signal digital files and corresponding features make this dataset suitable for studying dolphin behavior in order to gain a deeper understanding of their communication and interaction with fishing gear (trawl).
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Affiliation(s)
- Francesco Di Nardo
- Dipartimento di ingegneria dell'informazione, Università Politecnica delle Marche, Ancona, Italy.
| | - Rocco De Marco
- Institute of Biological Resources and Marine Biotechnology (IRBIM), National Research Council (CNR), Ancona, Italy.
| | - Alessandro Lucchetti
- Institute of Biological Resources and Marine Biotechnology (IRBIM), National Research Council (CNR), Ancona, Italy
- National Biodiversity Future Center, Palermo, Italy
| | - David Scaradozzi
- Dipartimento di ingegneria dell'informazione, Università Politecnica delle Marche, Ancona, Italy.
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Passive Acoustics to Study Marine and Freshwater Ecosystems. JOURNAL OF MARINE SCIENCE AND ENGINEERING 2022. [DOI: 10.3390/jmse10070994] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/07/2022]
Abstract
Passive acoustic monitoring is becoming an important tool to study the ecosystem thanks to technological improvements, high temporal resolution, relatively low cost and time effort, and the zero impact on environment and animal behavior [...]
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Gauger MFW, Romero-Vivas E, Peck MA, Balart EF, Caraveo-Patiño J. Seasonal and diel influences on bottlenose dolphin acoustic detection determined by whistles in a coastal lagoon in the southwestern Gulf of California. PeerJ 2022; 10:e13246. [PMID: 35607453 PMCID: PMC9123887 DOI: 10.7717/peerj.13246] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2021] [Accepted: 03/20/2022] [Indexed: 01/13/2023] Open
Abstract
Marine mammals in subtropical coastal habitats are sentinels of the health of the ecosystem and offer important ecosystem services. They rely on prey that pursues feeding opportunities, while both avoid unfavorable conditions. In many cases, these predator-prey dynamics fluctuate seasonally and are regulated by lunar, tidal, and/or diel cycles (hour). However, these rhythmical patterns may vary under different seasonal conditions. Bottlenose dolphins (Tursiops truncatus) in the Ensenada de La Paz in Baja California Sur, Mexico, were detected acoustically over the course of an annual cycle on 21 separate occasions, covering 640 h from June 2017 to May 2019. The presence of bottlenose dolphins was examined using Generalized Additive Models (GAM) including variables that are related directly to their habitat (direct variables: hour, distance, depth) and to their prey (indirect variables: SST, moon phase and tides). Seasonal differences in the presence of bottlenose dolphins were influenced more by indirect variables (explained deviance: 34.8% vs. 37.7%). Hourly acoustic detections occurred less frequently when SST exceeded 27.4 °C (Aug-End of Nov.) and more frequently at moderate temperatures (22.7 °C to 26.3 °C) in May through July. Moreover, bottlenose dolphins were detected more frequently during waning and new moon phases, at the onset of flood and ebb tides, and during day (04:00 to 20:00). The seasonal differences in acoustic detections rates were highlighted by the global GAM and hierarchical clustering. The strong seasonal pattern indicated possible interactions with rhythmic pattern of bottlenose dolphins. Four candidate variables (SST, moon, tide, and hour) were tested for plausible interaction terms additional to their individual consideration, out of which only hour changed significantly between seasons. The patterns of presence likely increase feeding opportunities or may favor other behaviors such as socializing, resting, or nursing. These might prove responsible for the distinct occurrence and hourly patterns of bottlenose dolphins.
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Affiliation(s)
- Marco F. W. Gauger
- Centro de Investigaciones Biológicas del Noroeste S.C., La Paz, Baja California Sur, México
| | - Eduardo Romero-Vivas
- Centro de Investigaciones Biológicas del Noroeste S.C., La Paz, Baja California Sur, México
| | - Myron A. Peck
- The Netherlands Royal Institute of Sea Research, Den Burg, Texel, Netherlands
| | - Eduardo F. Balart
- Centro de Investigaciones Biológicas del Noroeste S.C., La Paz, Baja California Sur, México
| | - Javier Caraveo-Patiño
- Centro de Investigaciones Biológicas del Noroeste S.C., La Paz, Baja California Sur, México
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Vocal Behaviour of a Bottlenose Dolphin Pod During a Deadly Bycatch Event in the Gulf of Catania, Ionian Sea. JOURNAL OF MARINE SCIENCE AND ENGINEERING 2022. [DOI: 10.3390/jmse10050616] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/04/2022]
Abstract
Cetacean bycatch is increasing worldwide and poses a threat to the conservation of several delphinids. The bottlenose dolphin (Tursiops truncatus) is frequently involved in bycatch incidents, due to its coastal distribution and opportunistic behaviour. The acoustic behaviour of cetaceans during death-related events is a largely unexplored topic. During an acoustic monitoring survey of the bottlenose dolphin population inhabiting the Gulf of Catania (Ionian Sea), we documented the entangling and subsequent death of a sub-adult male in a fishing net. Here, we provide a detailed analysis of the vocal behaviour of the pod of bottlenose dolphins during the event. We identified a total of 720 vocalisations in a timespan of 138 min, including 436 signature whistles, 51 non-signature whistles, and 233 burst pulses. We recorded high vocal activity, with a peak characterised by emission rates of 36 signature whistles per minute and 70 burst pulses per minute. Although future studies are required, our results show massive vocal activity during net entangling, characterised by a significant emission of signature whistles and burst pulses, including bray series of gulps and squeaks. Therefore, we suggest that developing tools for automatically detecting the peaks of these sound types could be helpful in recognising bycatch events, in order to better quantify the impact of professional fishing on small cetaceans.
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Pace DS, Tumino C, Silvestri M, Giacomini G, Pedrazzi G, Pavan G, Papale E, Ceraulo M, Buscaino G, Ardizzone G. Bray-Call Sequences in the Mediterranean Common Bottlenose Dolphin ( Tursiops truncatus) Acoustic Repertoire. BIOLOGY 2022; 11:biology11030367. [PMID: 35336741 PMCID: PMC8945472 DOI: 10.3390/biology11030367] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/24/2022] [Revised: 02/14/2022] [Accepted: 02/23/2022] [Indexed: 11/16/2022]
Abstract
Simple Summary In the acoustic repertoire of common bottlenose dolphins (Tursiops truncatus), Gulps, Grunts, and Squeaks are part of a group of vocalizations called “bray-call” for which little has been previously studied. The name comes from the alternating structure characteristic of a donkey’s bray. Sounds can be of different types at low frequencies and audible to the human hear—of short duration, produced in sequence. The function of these sequences is not clarified yet, and it is not known if they are part of the vocal “catalog” of all the different populations of common bottlenose dolphin at global level. What is certain is that bray-calls are present in two geographical areas of the Mediterranean and that the “Capitoline” individuals (Rome, Tyrrhenian Sea, Italy) emit them with greater frequency and variety than the Sicilian ones (Mazara del Vallo, Sicilian Channel, Italy). A number of 13 different types of sequences have been identified, and only 2 of them are shared between the study areas. For the first time this study identifies variants of the main bray-call elements, highlights the structural complexity of these vocalizations, and suggests addressing future research on the context of emissions and the possible function(s) of such acoustic arrangements. Abstract Acoustic sequences are commonly observed in many animal taxa. The vast vocal repertoire of common bottlenose dolphins (Tursiops truncatus) also includes sequences of multi-unit rhythmic signals called bray-call which are still poorly documented, both functionally and geographically. This study aimed to (1) describe, classify, and characterize series of bray-call recorded in two sites of the Mediterranean basin (Rome—Tyrrhenian Sea and Mazara del Vallo—Strait of Sicily) and (2) investigate for the existence of possible geographic differences. The acoustic analysis identified 13 different sequence types, only two detected in both study areas. The Sørensen–Dice index revealed a low degree of similarity between the sequence repertoire of the two common bottlenose dolphin sub-populations, with the Tyrrhenian being more diversified and complex than the Sicilian one. The acoustic parameters also showed variability between the study area. Different variants of the main acoustic elements composing the bray-call sequences were detected in the Tyrrhenian Sea only. The Markov-chain model demonstrated that the transition probability between acoustic elements is not uniform, with specific combinations of elements having a higher probability of occurrence. These new findings on common bottlenose dolphin bray-call sequences highlight the structural complexity of these vocalizations and suggest addressing future research on the context of emissions and the possible function(s) of such acoustic arrangements.
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Affiliation(s)
- Daniela Silvia Pace
- Department of Environmental Biology, Sapienza University of Rome, 00185 Rome, Italy; (C.T.); (G.G.); (G.P.); (G.A.)
- Correspondence: ; Tel.: +39-(0)6-4991-4763
| | - Carla Tumino
- Department of Environmental Biology, Sapienza University of Rome, 00185 Rome, Italy; (C.T.); (G.G.); (G.P.); (G.A.)
| | - Margherita Silvestri
- Department of Environmental and Evolutionary Sciences, University Austral of Chile, Valdivia 5090000, Chile;
| | - Giancarlo Giacomini
- Department of Environmental Biology, Sapienza University of Rome, 00185 Rome, Italy; (C.T.); (G.G.); (G.P.); (G.A.)
| | - Giulia Pedrazzi
- Department of Environmental Biology, Sapienza University of Rome, 00185 Rome, Italy; (C.T.); (G.G.); (G.P.); (G.A.)
| | - Gianni Pavan
- Department of Earth and Environmental Sciences, University of Pavia, 27100 Pavia, Italy;
| | - Elena Papale
- Consiglio Nazionale delle Ricerche-Istituto per lo Studio degli Impatti Antropici e Sostenibilità, Campobello di Mazara, 91021 Trapani, Italy; (E.P.); (M.C.); (G.B.)
- Department of Life Sciences and Systems Biology, University of Torino, 10123 Torino, Italy
| | - Maria Ceraulo
- Consiglio Nazionale delle Ricerche-Istituto per lo Studio degli Impatti Antropici e Sostenibilità, Campobello di Mazara, 91021 Trapani, Italy; (E.P.); (M.C.); (G.B.)
| | - Giuseppa Buscaino
- Consiglio Nazionale delle Ricerche-Istituto per lo Studio degli Impatti Antropici e Sostenibilità, Campobello di Mazara, 91021 Trapani, Italy; (E.P.); (M.C.); (G.B.)
| | - Giandomenico Ardizzone
- Department of Environmental Biology, Sapienza University of Rome, 00185 Rome, Italy; (C.T.); (G.G.); (G.P.); (G.A.)
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Pace DS, Di Marco C, Giacomini G, Ferri S, Silvestri M, Papale E, Casoli E, Ventura D, Mingione M, Alaimo Di Loro P, Jona Lasinio G, Ardizzone G. Capitoline Dolphins: Residency Patterns and Abundance Estimate of Tursiops truncatus at the Tiber River Estuary (Mediterranean Sea). BIOLOGY 2021; 10:275. [PMID: 33800538 PMCID: PMC8066396 DOI: 10.3390/biology10040275] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/26/2021] [Revised: 03/22/2021] [Accepted: 03/24/2021] [Indexed: 11/18/2022]
Abstract
Periodic assessments of population status and trends to detect natural influences and human effects on coastal dolphin are often limited by lack of baseline information. Here, we investigated for the first time the site-fidelity patterns and estimated the population size of bottlenose dolphins (Tursiops truncatus) at the Tiber River estuary (central Mediterranean, Tyrrhenian Sea, Rome, Italy) between 2017 and 2020. We used photo-identification data and site-fidelity metrics to study the tendency of dolphins to remain in, or return to, the study area, and capture-recapture models to estimate the population abundance. In all, 347 unique individuals were identified. The hierarchical cluster analysis highlighted 3 clusters, labeled resident (individuals encountered at least five times, in three different months, over three distinct years; n = 42), part-time (individuals encountered at least on two occasions in a month, in at least two different years; n = 73), and transient (individuals encountered on more than one occasion, in more than 1 month, none of them in more than 1 year; n = 232), each characterized by site-fidelity metrics. Open POPAN modeling estimated a population size of 529 individuals (95% CI: 456-614), showing that the Capitoline (Roman) coastal area and nearby regions surrounding the Tiber River estuary represent an important, suitable habitat for bottlenose dolphins, despite their proximity to one of the major urban centers in the world (the city of Rome). Given the high number of individuals in the area and the presence of resident individuals with strong site fidelity, we suggest that conservation plans should not be focused only close to the Tiber River mouths but extended to cover a broader scale of area.
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Affiliation(s)
- Daniela Silvia Pace
- Department of Environmental Biology, Sapienza University of Rome, 00185 Rome, Italy; (C.D.M.); (G.G.); (S.F.); (M.S.); (E.C.); (D.V.); (G.A.)
| | - Chiara Di Marco
- Department of Environmental Biology, Sapienza University of Rome, 00185 Rome, Italy; (C.D.M.); (G.G.); (S.F.); (M.S.); (E.C.); (D.V.); (G.A.)
| | - Giancarlo Giacomini
- Department of Environmental Biology, Sapienza University of Rome, 00185 Rome, Italy; (C.D.M.); (G.G.); (S.F.); (M.S.); (E.C.); (D.V.); (G.A.)
| | - Sara Ferri
- Department of Environmental Biology, Sapienza University of Rome, 00185 Rome, Italy; (C.D.M.); (G.G.); (S.F.); (M.S.); (E.C.); (D.V.); (G.A.)
| | - Margherita Silvestri
- Department of Environmental Biology, Sapienza University of Rome, 00185 Rome, Italy; (C.D.M.); (G.G.); (S.F.); (M.S.); (E.C.); (D.V.); (G.A.)
| | - Elena Papale
- CNR-IAS, Campobello di Mazara, 91021 Trapani, Italy;
- Department of Life Sciences and Systems Biology, University of Torino, 10123 Torino, Italy
| | - Edoardo Casoli
- Department of Environmental Biology, Sapienza University of Rome, 00185 Rome, Italy; (C.D.M.); (G.G.); (S.F.); (M.S.); (E.C.); (D.V.); (G.A.)
| | - Daniele Ventura
- Department of Environmental Biology, Sapienza University of Rome, 00185 Rome, Italy; (C.D.M.); (G.G.); (S.F.); (M.S.); (E.C.); (D.V.); (G.A.)
| | - Marco Mingione
- Department of Statistical Sciences, Sapienza University of Rome, 00185 Rome, Italy; (M.M.); (P.A.D.L.); (G.J.L.)
| | - Pierfrancesco Alaimo Di Loro
- Department of Statistical Sciences, Sapienza University of Rome, 00185 Rome, Italy; (M.M.); (P.A.D.L.); (G.J.L.)
| | - Giovanna Jona Lasinio
- Department of Statistical Sciences, Sapienza University of Rome, 00185 Rome, Italy; (M.M.); (P.A.D.L.); (G.J.L.)
| | - Giandomenico Ardizzone
- Department of Environmental Biology, Sapienza University of Rome, 00185 Rome, Italy; (C.D.M.); (G.G.); (S.F.); (M.S.); (E.C.); (D.V.); (G.A.)
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