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Maimone NM, Apaza-Castillo GA, Quecine MC, de Lira SP. Accessing the specialized metabolome of actinobacteria from the bulk soil of Paullinia cupana Mart. on the Brazilian Amazon: a promising source of bioactive compounds against soybean phytopathogens. Braz J Microbiol 2024; 55:1863-1882. [PMID: 38421597 PMCID: PMC11153476 DOI: 10.1007/s42770-024-01286-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2023] [Accepted: 02/10/2024] [Indexed: 03/02/2024] Open
Abstract
The Amazon rainforest, an incredibly biodiverse ecosystem, has been increasingly vulnerable to deforestation. Despite its undeniable importance and potential, the Amazonian microbiome has historically received limited study, particularly in relation to its unique arsenal of specialized metabolites. Therefore, in this study our aim was to assess the metabolic diversity and the antifungal activity of actinobacterial strains isolated from the bulk soil of Paullinia cupana, a native crop, in the Brazilian Amazon Rainforest. Extracts from 24 strains were subjected to UPLC-MS/MS analysis using an integrative approach that relied on the Chemical Structural and Compositional Similarity (CSCS) metric, GNPS molecular networking, and in silico dereplication tools. This procedure allowed the comprehensive understanding of the chemical space encompassed by these actinobacteria, which consists of features belonging to known bioactive metabolite classes and several unannotated molecular families. Among the evaluated strains, five isolates exhibited bioactivity against a panel of soybean fungal phytopathogens (Rhizoctonia solani, Macrophomina phaseolina, and Sclerotinia sclerotiorum). A focused inspection led to the annotation of pepstatins, oligomycins, hydroxamate siderophores and dorrigocins as metabolites produced by these bioactive strains, with potentially unknown compounds also comprising their metabolomes. This study introduces a pragmatic protocol grounded in established and readily available tools for the annotation of metabolites and the prioritization of strains to optimize further isolation of specialized metabolites. Conclusively, we demonstrate the relevance of the Amazonian actinobacteria as sources for bioactive metabolites useful for agriculture. We also emphasize the importance of preserving this biome and conducting more in-depth studies on its microbiota.
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Affiliation(s)
- Naydja Moralles Maimone
- College of Agriculture "Luiz de Queiroz", Department of Exact Sciences, University of São Paulo, Piracicaba, SP, 13418-900, Brazil
| | - Gladys Angélica Apaza-Castillo
- College of Agriculture "Luiz de Queiroz", Department of Genetics, University of São Paulo, Piracicaba, SP, 13418-900, Brazil
| | - Maria Carolina Quecine
- College of Agriculture "Luiz de Queiroz", Department of Genetics, University of São Paulo, Piracicaba, SP, 13418-900, Brazil
| | - Simone Possedente de Lira
- College of Agriculture "Luiz de Queiroz", Department of Exact Sciences, University of São Paulo, Piracicaba, SP, 13418-900, Brazil.
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A Spectral Mixture Analysis and Landscape Metrics Based Framework for Monitoring Spatiotemporal Forest Cover Changes: A Case Study in Mato Grosso, Brazil. REMOTE SENSING 2022. [DOI: 10.3390/rs14081907] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
An increasing amount of Brazilian rainforest is being lost or degraded for various reasons, both anthropogenic and natural, leading to a loss of biodiversity and further global consequences. Especially in the Brazilian state of Mato Grosso, soy production and large-scale cattle farms led to extensive losses of rainforest in recent years. We used a spectral mixture approach followed by a decision tree classification based on more than 30 years of Landsat data to quantify these losses. Research has shown that current methods for assessing forest degradation are lacking accuracy. Therefore, we generated classifications to determine land cover changes for each year, focusing on both cleared and degraded forest land. The analyses showed a decrease in forest area in Mato Grosso by 28.8% between 1986 and 2020. In order to measure changed forest structures for the selected period, fragmentation analyses based on diverse landscape metrics were carried out for the municipality of Colniza in Mato Grosso. It was found that forest areas experienced also a high degree of fragmentation over the study period, with an increase of 83.3% of the number of patches and a decrease of the mean patch area of 86.1% for the selected time period, resulting in altered habitats for flora and fauna.
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Areas Available for the Potential Sustainable Expansion of Soy in Brazil: A Geospatial Assessment Using the SAFmaps Database. REMOTE SENSING 2022. [DOI: 10.3390/rs14071628] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Abstract
Recently, soybean production almost doubled in Brazil, reaching 122 million tonnes, and it is expected to increase even more. Brazil is the world’s largest producer and is primarily an exporter. From a sustainability point of view, soy production has been strongly criticized mainly in relation to deforestation, albeit for indirect effects. Soybean oil is a potential feedstock for the production of bio-jet fuels, which needs to be sustainable according to international criteria (sustainable aviation fuels—SAF). This paper aims to estimate the areas still available for soy expansion in Brazil, considering conditions that would allow the production of SAF. We used the SAFmaps platform, a geospatial database with information on the most promising bioenergy crops for SAF and their supply chains. Just by displacing pastures and observing a set of constraints, the total area available for expansion was estimated at 192.8 thousand km2, of which 43% is of high suitability. These areas are concentrated in the Center-West region. Assuming a vertical supply chain, the results of the case studies of SAF production indicate potential feasibility, but some hypotheses considered are optimistic. Moreover, the results indicate that there can be sustainable production of soybean oil and contribution to the production of SAF.
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Socioeconomic and environmental effects of soybean production in metacoupled systems. Sci Rep 2021; 11:18662. [PMID: 34545181 PMCID: PMC8452730 DOI: 10.1038/s41598-021-98256-6] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2021] [Accepted: 09/06/2021] [Indexed: 02/08/2023] Open
Abstract
Human-environment interactions within and across borders are now more influential than ever, posing unprecedented sustainability challenges. The framework of metacoupling (interactions within and across adjacent and distant coupled human-environment systems) provides a useful tool to evaluate them at diverse temporal and spatial scales. While most metacoupling studies have so far addressed the impacts of distant interactions (telecouplings), few have addressed the complementary and interdependent effects of the interactions within coupled systems (intracouplings) and between adjacent systems (pericouplings). Using the production and trade of a major commodity (soybean) as a demonstration, this paper empirically evaluates the complex effects on deforestation and economic growth across a globally important soybean producing region (Mato Grosso in Brazil). Although this region is influenced by a strong telecoupling process (i.e., soybean trade with national and international markets), intracouplings pose significant effects on deforestation and economic growth within focal municipalities. Furthermore, it generates pericoupling effects (e.g., deforestation) on adjacent municipalities, which precede economic benefits on adjacent systems, and may occur during and after the soybean production takes place. These results show that while economic benefits of the production of agricultural commodities for global markets tend to be localized, their environmental costs tend to be spatially widespread. As deforestation also occurred in adjacent areas beyond focal areas with economic development, this study has significant implications for sustainability in an increasingly metacoupled world.
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Santos AMD, Silva CFAD, Almeida Junior PMD, Rudke AP, Melo SND. Deforestation drivers in the Brazilian Amazon: assessing new spatial predictors. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2021; 294:113020. [PMID: 34126530 DOI: 10.1016/j.jenvman.2021.113020] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/21/2021] [Revised: 05/10/2021] [Accepted: 06/04/2021] [Indexed: 05/18/2023]
Abstract
Researches on the deforestation of the Amazon have gained prominence in the last recent years, mainly with the change in the policy regarding the facing of this phenomenon by the Brazilian government. Therefore, an understanding about the causes that pressure the occurrence of deforestation remains relevant and has a leading role in the world. Therefore, the aim of this study is to perform the analysis of the spatial variability of the reasons for the deforestation in the Amazon Biome, in Brazil, (2010-2019). To achieve this goal, 14 variables were selected, the choice and adjustment of the regression model were determined and a diagnosis was carried out in order to verify the most appropriate model. To achieve this purpose, a geographic database was structured in a geographic information system environment. The main results revealed that the adjusted R2 of the Geographically Weighted Regression (GWR) was 0.96, that is, the GWR model explains 96% of the variations in deforestation. Therefore, it was observed a significant gain when using this model. In addition, it was also observed that the average variable of the number of oxen was, among those analyzed, the one that showed the highest correlation with deforestation. Thus, it was found that the livestock sector in southern Amazonia is the main economic agent that pressures large areas of deforestation, since stockfarming is practiced extensively. Finally, it was concluded that the municipalities with the largest areas of deforestation formed a cluster in the southern portion of the Amazon, in the arc of deforestation.
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Affiliation(s)
- Alex Mota Dos Santos
- Center of Agroforestry Sciences and Technologies, Federal University of Southern Bahia, Rodovia Ilhéus/Itabuna, Km 22, Itabuna, 45604-811, Brazil.
| | - Carlos Fabricio Assunção da Silva
- Department of Cartographic and Survey Engineering, Center of Technologies and Geosciences, Federal University of Pernambuco, UFPE, Avenida Acadêmico Hélio Ramos, Cidade Universitária, s/n, Recife, 50740-530, Brazil.
| | - Pedro Monteiro de Almeida Junior
- Department of Statistics, Center of Nature and Exact Sciences, Federal University of Pernambuco, UFPE, Avenida Professor Moraes Rego, 1235, Cidade Universitária, 50670-901, Recife, Pernambuco, Brazil.
| | - Anderson Paulo Rudke
- Department of Sanitary and Environmental Engineering, Federal University of Minas Gerais, Av. Pres. Antônio Carlos, 6627, 31270-901, Belo Horizonte, Brazil; Federal University of Technology - Paraná, Av. Dos Pioneiros, 3131, 86036-370, Londrina, Brazil.
| | - Silas Nogueira de Melo
- Department of History and Geography, State University of Maranhão, Cidade Universitária Paulo VI, São Luís, 65055-000, Brazil.
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Trigueiro WR, Nabout JC, Tessarolo G. Uncovering the spatial variability of recent deforestation drivers in the Brazilian Cerrado. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2020; 275:111243. [PMID: 32841792 DOI: 10.1016/j.jenvman.2020.111243] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/04/2019] [Revised: 08/07/2020] [Accepted: 08/15/2020] [Indexed: 05/18/2023]
Abstract
In recent years, the Cerrado deforestation has increased considerably, reaching rates higher than in the Amazonian realm. Although the effects of deforestation are well known, the understanding of its drives at regional levels is incipient. Most studies consider that a driver influences deforestation likewise in all regions. However, deforestation has a strong spatial structure that can lead drivers to vary their influence on deforestation in different regions. Here, we evaluated the spatial variability in the relationship between the recent Cerrado deforestation and socioeconomic, environmental, and structural drivers at a regional scale. We used a geographically weighted regression (GWR) to assess the spatial variability of predictor variables. We identified regions that respond similarly to the drivers by grouping municipalities, considering their GWR coefficients through hierarchical clustering. The analyses that consider the spatial variability of predictors are more appropriated to assess the causes of recent deforestation. Remnant natural vegetation influenced the recent deforestation in all defined regions. Greater access to rural credit concession was the main driving force of deforestation in the northeast region defined here. Distance to roads increased deforestation in the northeast and north regions, while it inhibited deforestation in the central-east and southeast regions. Rainfall inhibited deforestation in the northeast, north, and southwest regions. Steep slope prevented deforestation mainly in the northeast, north, and southwest regions. Our results highlight that, to effectively reduce Cerrado deforestation, public policies should integrate strategies focusing not only at national and biome levels but also at the regional spatial level.
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Affiliation(s)
- Werikson Rodrigues Trigueiro
- Universidade Estadual de Goiás, Campus de Ciências Exatas e Tecnológicas, CEP 75132-903, Anápolis, Goiás, Brazil; Instituto Brasileiro Do Meio Ambiente e Dos Recursos Naturais Renováveis, Superintendência Regional de Goiás. Goiânia, GO, Brazil
| | - João Carlos Nabout
- Universidade Estadual de Goiás, Campus de Ciências Exatas e Tecnológicas, CEP 75132-903, Anápolis, Goiás, Brazil
| | - Geiziane Tessarolo
- Universidade Estadual de Goiás, Campus de Ciências Exatas e Tecnológicas, CEP 75132-903, Anápolis, Goiás, Brazil.
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Assessing Land Use and Land Cover Changes in the Direct Influence Zone of the Braço Norte Hydropower Complex, Brazilian Amazonia. FORESTS 2020. [DOI: 10.3390/f11090988] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Over the decades, hydropower complexes have been built in several hydrographic basins of Brazil including the Amazon region. Therefore, it is important to understand the effects of these constructions on the environment and local communities. This work presents a land use and land cover change temporal analysis considering a 33-year period (1985–2018) in the direct influence zone of the Braço Norte Hydropower Complex, Brazilian Amazonia, using the Collection 4.1 level 3 of the freely available MapBiomas dataset. Additionally, we have assessed the Brazilian Amazon large-scale deforestation process acting as a land use and land cover change driver in the study area. Our findings show that the most impacted land cover was forest formation (from 414 km2 to 287 km2, a reduction of 69%), which primarily shifted into pasturelands (increase of 664%, from 40 km2 to 299 km2). The construction of the hydropower complex also triggered indirect impacts such as the presence of urban areas in 2018 and the consequent increased local demand for crops. Together with the ongoing large-scale Amazonian deforestation process, the construction of the complex has intensified changes in the study area as 56.42% of the pixels were changed between 1985 and 2018. This indicates the importance of accurate economic and environmental impact studies for assessing social and environmental consequences of future construction in this unique region. Our results reveal the need for adopting special policies to minimize the impact of these constructions, for example, the creation of Protected Areas and the definition of locally-adjusted parameters for the ecological-economic zoning considering environmental and social circumstances derived from the local actors that depend on the natural environment to subsist such as indigenous peoples, riverine population, and artisanal fishermen.
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