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ME-CCNN: Multi-encoded images and a cascade convolutional neural network for breast tumor segmentation and recognition. Artif Intell Rev 2023. [DOI: 10.1007/s10462-023-10426-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/21/2023]
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Ranjbarzadeh R, Dorosti S, Jafarzadeh Ghoushchi S, Caputo A, Tirkolaee EB, Ali SS, Arshadi Z, Bendechache M. Breast tumor localization and segmentation using machine learning techniques: Overview of datasets, findings, and methods. Comput Biol Med 2023; 152:106443. [PMID: 36563539 DOI: 10.1016/j.compbiomed.2022.106443] [Citation(s) in RCA: 10] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2022] [Revised: 11/24/2022] [Accepted: 12/15/2022] [Indexed: 12/23/2022]
Abstract
The Global Cancer Statistics 2020 reported breast cancer (BC) as the most common diagnosis of cancer type. Therefore, early detection of such type of cancer would reduce the risk of death from it. Breast imaging techniques are one of the most frequently used techniques to detect the position of cancerous cells or suspicious lesions. Computer-aided diagnosis (CAD) is a particular generation of computer systems that assist experts in detecting medical image abnormalities. In the last decades, CAD has applied deep learning (DL) and machine learning approaches to perform complex medical tasks in the computer vision area and improve the ability to make decisions for doctors and radiologists. The most popular and widely used technique of image processing in CAD systems is segmentation which consists of extracting the region of interest (ROI) through various techniques. This research provides a detailed description of the main categories of segmentation procedures which are classified into three classes: supervised, unsupervised, and DL. The main aim of this work is to provide an overview of each of these techniques and discuss their pros and cons. This will help researchers better understand these techniques and assist them in choosing the appropriate method for a given use case.
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Affiliation(s)
- Ramin Ranjbarzadeh
- School of Computing, Faculty of Engineering and Computing, Dublin City University, Ireland.
| | - Shadi Dorosti
- Department of Industrial Engineering, Urmia University of Technology, Urmia, Iran.
| | | | - Annalina Caputo
- School of Computing, Faculty of Engineering and Computing, Dublin City University, Ireland.
| | | | - Sadia Samar Ali
- Department of Industrial Engineering, Faculty of Engineering, King Abdulaziz University, Jeddah, Saudi Arabia.
| | - Zahra Arshadi
- Faculty of Electronics, Telecommunications and Physics Engineering, Polytechnic University, Turin, Italy.
| | - Malika Bendechache
- Lero & ADAPT Research Centres, School of Computer Science, University of Galway, Ireland.
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Ahmadi M, Sharifi A, Jafarian Fard M, Soleimani N. Detection of brain lesion location in MRI images using convolutional neural network and robust PCA. Int J Neurosci 2023; 133:55-66. [PMID: 33517817 DOI: 10.1080/00207454.2021.1883602] [Citation(s) in RCA: 39] [Impact Index Per Article: 39.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
Abstract
Purpose and aim: Detection of brain tumors plays a critical role in the treatment of patients. Before any treatment, tumor segmentation is crucial to protect healthy tissues during treatment and to destroy tumor cells. Tumor segmentation involves the detection, precise identification, and separation of tumor tissues. In this paper, we provide a deep learning method for the segmentation of brain tumors. Material and methods: In this article, we used a convolutional neural network (CNN) to segment tumors in seven types of brain disease consisting of Glioma, Meningioma, Alzheimer's, Alzheimer's plus, Pick, Sarcoma, and Huntington. First, we used the feature-reduction-based method robust principal component analysis to find tumor location and spot in a dataset of Harvard Medical School. Then we present an architecture of the CNN method to detect brain tumors. Results: Results are depicted based on the probability of tumor location in magnetic resonance images. Results show that the presented method provides high accuracy (96%), sensitivity (99.9%), and dice index (91%) regarding other investigations. Conclusion: The provided unsupervised method for tumor clustering and proposed supervised architecture can be potential methods for medical uses.
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Affiliation(s)
- Mohsen Ahmadi
- Department of Industrial Engineering, Urmia University of Technology, Urmia, Iran
| | - Abbas Sharifi
- Department of Mechanical Engineering, Urmia University of Technology, Urmia, Iran
| | - Mahta Jafarian Fard
- Department of Electrical Engineering, Islamic Azad University Science and Research, Razavi Khorasan, Iran
| | - Nastaran Soleimani
- Department of Electronics and Telecommunications (DET), University of Politecnico di Torino, Turin, Italy
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Tiwari D, Bhati BS, Al‐Turjman F, Nagpal B. Pandemic coronavirus disease (Covid-19): World effects analysis and prediction using machine-learning techniques. EXPERT SYSTEMS 2022; 39:e12714. [PMID: 34177035 PMCID: PMC8209956 DOI: 10.1111/exsy.12714] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/05/2021] [Accepted: 04/26/2021] [Indexed: 05/09/2023]
Abstract
Pandemic novel Coronavirus (Covid-19) is an infectious disease that primarily spreads by droplets of nose discharge when sneezing and saliva from the mouth when coughing, that had first been reported in Wuhan, China in December 2019. Covid-19 became a global pandemic, which led to a harmful impact on the world. Many predictive models of Covid-19 are being proposed by academic researchers around the world to take the foremost decisions and enforce the appropriate control measures. Due to the lack of accurate Covid-19 records and uncertainty, the standard techniques are being failed to correctly predict the epidemic global effects. To address this issue, we present an Artificial Intelligence (AI)-based meta-analysis to predict the trend of epidemic Covid-19 over the world. The powerful machine learning algorithms namely Naïve Bayes, Support Vector Machine (SVM) and Linear Regression were applied on real time-series dataset, which holds the global record of confirmed, recovered, deaths and active cases of Covid-19 outbreak. Statistical analysis has also been conducted to present various facts regarding Covid-19 observed symptoms, a list of Top-20 Coronavirus affected countries and a number of coactive cases over the world. Among the three machine learning techniques investigated, Naïve Bayes produced promising results to predict Covid-19 future trends with less Mean Absolute Error (MAE) and Mean Squared Error (MSE). The less value of MAE and MSE strongly represent the effectiveness of the Naïve Bayes regression technique. Although, the global footprint of this pandemic is still uncertain. This study demonstrates the various trends and future growth of the global pandemic for a proactive response from the citizens and governments of countries. This paper sets the initial benchmark to demonstrate the capability of machine learning for outbreak prediction.
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Affiliation(s)
- Dimple Tiwari
- Ambedkar Institute of Advanced Communication Technologies and Research, Govt of NCT of DelhiDelhiIndia
| | - Bhoopesh Singh Bhati
- Ambedkar Institute of Advanced Communication Technologies and Research, Govt of NCT of DelhiDelhiIndia
| | - Fadi Al‐Turjman
- Artificial Intelligence Engineering Department, Research Center for AI and IoTNear East UniversityNicosiaTurkey
| | - Bharti Nagpal
- Ambedkar Institute of Advanced Communication Technologies and Research, Govt of NCT of DelhiDelhiIndia
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Nerve optic segmentation in CT images using a deep learning model and a texture descriptor. COMPLEX INTELL SYST 2022. [DOI: 10.1007/s40747-022-00694-w] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
AbstractThe increased intracranial pressure (ICP) can be described as an increase in pressure around the brain and can lead to serious health problems. The assessment of ultrasound images is commonly conducted by skilled experts which is a time-consuming approach, but advanced computer-aided diagnosis (CAD) systems can assist the physician to decrease the time of ICP diagnosis. The accurate detection of the nerve optic regions, with drawing a precise slope line behind the eyeball and calculating the diameter of nerve optic, are the main aims of this research. First, the Fuzzy C-mean (FCM) clustering is employed for segmenting the input CT screening images into the different parts. Second, a histogram equalization approach is used for region-based image quality enhancement. Then, the Local Directional Number method (LDN) is used for representing some key information in a new image. Finally, a cascade Convolutional Neural Network (CNN) is employed for nerve optic segmentation by two distinct input images. Comprehensive experiments on the CT screening dataset [The Cancer Imaging Archive (TCIA)] consisting of 1600 images show the competitive results of inaccurate extraction of the brain features. Also, the indexes such as Dice, Specificity, and Precision for the proposed approach are reported 87.7%, 91.3%, and 90.1%, respectively. The final classification results show that the proposed approach effectively and accurately detects the nerve optic and its diameter in comparison with the other methods. Therefore, this method can be used for early diagnose of ICP and preventing the occurrence of serious health problems in patients.
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Hamzenejad A, Ghoushchi SJ, Baradaran V. Clustering of Brain Tumor Based on Analysis of MRI Images Using Robust Principal Component Analysis (ROBPCA) Algorithm. BIOMED RESEARCH INTERNATIONAL 2021; 2021:5516819. [PMID: 34504897 PMCID: PMC8423553 DOI: 10.1155/2021/5516819] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/08/2021] [Revised: 02/26/2021] [Accepted: 08/16/2021] [Indexed: 11/18/2022]
Abstract
Automated detection of brain tumor location is essential for both medical and analytical uses. In this paper, we clustered brain MRI images to detect tumor location. To obtain perfect results, we presented an unsupervised robust PCA algorithm to clustered images. The proposed method clusters brain MR image pixels to four leverages. The algorithm is implemented for five brain diseases such as glioma, Huntington, meningioma, Pick, and Alzheimer's. We used ten images of each disease to validate the optimal identification rate. According to the results obtained, 2% of the data in the bad leverage part of the image were determined, which acceptably discerned the tumor. Results show that this method has the potential to detect tumor location for brain disease with high sensitivity. Moreover, results show that the method for the Glioma images has approximately better results than others. However, according to the ROC curve for all selected diseases, the present method can find lesion location.
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Affiliation(s)
- Ali Hamzenejad
- Department of Industrial Engineering, Islamic Azad University, Tehran North Branch, Tehran, Iran
| | | | - Vahid Baradaran
- Department of Industrial Engineering, Islamic Azad University, Tehran North Branch, Tehran, Iran
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Valizadeh A, Jafarzadeh Ghoushchi S, Ranjbarzadeh R, Pourasad Y. Presentation of a Segmentation Method for a Diabetic Retinopathy Patient's Fundus Region Detection Using a Convolutional Neural Network. COMPUTATIONAL INTELLIGENCE AND NEUROSCIENCE 2021; 2021:7714351. [PMID: 34354746 PMCID: PMC8331281 DOI: 10.1155/2021/7714351] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/06/2021] [Revised: 06/30/2021] [Accepted: 07/18/2021] [Indexed: 01/16/2023]
Abstract
Diabetic retinopathy is characteristic of a local distribution that involves early-stage risk factors and can forecast the evolution of the illness or morphological lesions related to the abnormality of retinal blood flows. Regional variations in retinal blood flow and modulation of retinal capillary width in the macular area and the retinal environment are also linked to the course of diabetic retinopathy. Despite the fact that diabetic retinopathy is frequent nowadays, it is hard to avoid. An ophthalmologist generally determines the seriousness of the retinopathy of the eye by directly examining color photos and evaluating them by visually inspecting the fundus. It is an expensive process because of the vast number of diabetic patients around the globe. We used the IDRiD data set that contains both typical diabetic retinopathic lesions and normal retinal structures. We provided a CNN architecture for the detection of the target region of 80 patients' fundus imagery. Results demonstrate that the approach described here can nearly detect 83.84% of target locations. This result can potentially be utilized to monitor and regulate patients.
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Affiliation(s)
- Amin Valizadeh
- Department of Mechanical Engineering, Ferdowsi University of Mashhad, Mashhad, Iran
| | - Saeid Jafarzadeh Ghoushchi
- Department of Industrial Engineering, Urmia University of Technology (UUT), P.O. Box 57166-419, Urmia, Iran
| | - Ramin Ranjbarzadeh
- Department of Telecommunications Engineering, Faculty of Engineering, University of Guilan, Rasht, Iran
| | - Yaghoub Pourasad
- Department of Electrical Engineering, Urmia University of Technology (UUT), P.O. Box 57166-419, Urmia, Iran
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An Extended Approach to Predict Retinopathy in Diabetic Patients Using the Genetic Algorithm and Fuzzy C-Means. BIOMED RESEARCH INTERNATIONAL 2021; 2021:5597222. [PMID: 34258269 PMCID: PMC8257333 DOI: 10.1155/2021/5597222] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/02/2021] [Accepted: 06/19/2021] [Indexed: 01/23/2023]
Abstract
The present study is developed a new approach using a computer diagnostic method to diagnosing diabetic diseases with the use of fluorescein images. In doing so, this study presented the growth region algorithm for the aim of diagnosing diabetes, considering the angiography images of the patients' eyes. In addition, this study integrated two methods, including fuzzy C-means (FCM) and genetic algorithm (GA) to predict the retinopathy in diabetic patients from angiography images. The developed algorithm was applied to a total of 224 images of patients' retinopathy eyes. As clearly confirmed by the obtained results, the GA-FCM method outperformed the hand method regarding the selection of initial points. The proposed method showed 0.78 sensitivity. The comparison of the fuzzy fitness function in GA with other techniques revealed that the approach introduced in this study is more applicable to the Jaccard index since it could offer the lowest Jaccard distance and, at the same time, the highest Jaccard values. The results of the analysis demonstrated that the proposed method was efficient and effective to predict the retinopathy in diabetic patients from angiography images.
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Pourasad Y, Cavallaro F. A Novel Image Processing Approach to Enhancement and Compression of X-ray Images. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2021; 18:ijerph18136724. [PMID: 34206486 PMCID: PMC8297375 DOI: 10.3390/ijerph18136724] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/19/2021] [Revised: 06/17/2021] [Accepted: 06/19/2021] [Indexed: 11/28/2022]
Abstract
At present, there is an increase in the capacity of data generated and stored in the medical area. Thus, for the efficient handling of these extensive data, the compression methods need to be re-explored by considering the algorithm’s complexity. To reduce the redundancy of the contents of the image, thus increasing the ability to store or transfer information in optimal form, an image processing approach needs to be considered. So, in this study, two compression techniques, namely lossless compression and lossy compression, were applied for image compression, which preserves the image quality. Moreover, some enhancing techniques to increase the quality of a compressed image were employed. These methods were investigated, and several comparison results are demonstrated. Finally, the performance metrics were extracted and analyzed based on state-of-the-art methods. PSNR, MSE, and SSIM are three performance metrics that were used for the sample medical images. Detailed analysis of the measurement metrics demonstrates better efficiency than the other image processing techniques. This study helps to better understand these strategies and assists researchers in selecting a more appropriate technique for a given use case.
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Affiliation(s)
- Yaghoub Pourasad
- Department of Electrical Engineering, Urmia University of Technology, Urmia 17165-57166, Iran
- Correspondence:
| | - Fausto Cavallaro
- Department of Economics, University of Molise, Via De Sanctis, 86100 Campobasso, Italy;
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Ranjbarzadeh R, Jafarzadeh Ghoushchi S, Bendechache M, Amirabadi A, Ab Rahman MN, Baseri Saadi S, Aghamohammadi A, Kooshki Forooshani M. Lung Infection Segmentation for COVID-19 Pneumonia Based on a Cascade Convolutional Network from CT Images. BIOMED RESEARCH INTERNATIONAL 2021; 2021:5544742. [PMID: 33954175 PMCID: PMC8054863 DOI: 10.1155/2021/5544742] [Citation(s) in RCA: 32] [Impact Index Per Article: 10.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/25/2021] [Revised: 02/18/2021] [Accepted: 03/31/2021] [Indexed: 12/23/2022]
Abstract
The COVID-19 pandemic is a global, national, and local public health concern which has caused a significant outbreak in all countries and regions for both males and females around the world. Automated detection of lung infections and their boundaries from medical images offers a great potential to augment the patient treatment healthcare strategies for tackling COVID-19 and its impacts. Detecting this disease from lung CT scan images is perhaps one of the fastest ways to diagnose patients. However, finding the presence of infected tissues and segment them from CT slices faces numerous challenges, including similar adjacent tissues, vague boundary, and erratic infections. To eliminate these obstacles, we propose a two-route convolutional neural network (CNN) by extracting global and local features for detecting and classifying COVID-19 infection from CT images. Each pixel from the image is classified into the normal and infected tissues. For improving the classification accuracy, we used two different strategies including fuzzy c-means clustering and local directional pattern (LDN) encoding methods to represent the input image differently. This allows us to find more complex pattern from the image. To overcome the overfitting problems due to small samples, an augmentation approach is utilized. The results demonstrated that the proposed framework achieved precision 96%, recall 97%, F score, average surface distance (ASD) of 2.8 ± 0.3 mm, and volume overlap error (VOE) of 5.6 ± 1.2%.
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Affiliation(s)
- Ramin Ranjbarzadeh
- Department of Telecommunications Engineering, Faculty of Engineering, University of Guilan, Rasht, Iran
| | | | - Malika Bendechache
- School of Computing, Faculty of Engineering and Computing, Dublin City University, Ireland
| | - Amir Amirabadi
- Department of Electrical Engineering, Islamic Azad University, South Tehran Branch, Tehran, Iran
| | - Mohd Nizam Ab Rahman
- Department of Mechanical and Manufacturing Engineering, Faculty of Engineering and Built Environment, Universiti Kebangsaan Malaysia, 43600 Bangi Selangor, Malaysia
| | - Soroush Baseri Saadi
- Department of Electrical Engineering, Islamic Azad University, South Tehran Branch, Tehran, Iran
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A New Algorithm for Digital Image Encryption Based on Chaos Theory. ENTROPY 2021; 23:e23030341. [PMID: 33805786 PMCID: PMC7998182 DOI: 10.3390/e23030341] [Citation(s) in RCA: 48] [Impact Index Per Article: 16.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/06/2021] [Revised: 03/08/2021] [Accepted: 03/08/2021] [Indexed: 11/17/2022]
Abstract
In recent decades, image encryption, as one of the significant information security fields, has attracted many researchers and scientists. However, several studies have been performed with different methods, and novel and useful algorithms have been suggested to improve secure image encryption schemes. Nowadays, chaotic methods have been found in diverse fields, such as the design of cryptosystems and image encryption. Chaotic methods-based digital image encryptions are a novel image encryption method. This technique uses random chaos sequences for encrypting images, and it is a highly-secured and fast method for image encryption. Limited accuracy is one of the disadvantages of this technique. This paper researches the chaos sequence and wavelet transform value to find gaps. Thus, a novel technique was proposed for digital image encryption and improved previous algorithms. The technique is run in MATLAB, and a comparison is made in terms of various performance metrics such as the Number of Pixels Change Rate (NPCR), Peak Signal to Noise Ratio (PSNR), Correlation coefficient, and Unified Average Changing Intensity (UACI). The simulation and theoretical analysis indicate the proposed scheme's effectiveness and show that this technique is a suitable choice for actual image encryption.
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Wavelet Transform-Statistical Time Features-Based Methodology for Epileptic Seizure Prediction Using Electrocardiogram Signals. MATHEMATICS 2020. [DOI: 10.3390/math8122125] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Epilepsy is a brain disorder that affects about 50 million persons around the world and is characterized by generating recurrent seizures, which can put patients in permanent because of falls, drowning, burns, and prolonged seizures that they can suffer. Hence, it is of vital importance to propose a methodology with the capability of predicting a seizure with several minutes before the onset, allowing that the patients take their precautions against injuries. In this regard, a methodology based on the wavelet packet transform (WPT), statistical time features (STFs), and a decision tree classifier (DTC) for predicting an epileptic seizure using electrocardiogram (ECG) signals is presented. Seventeen STFs were analyzed to measure changes in the properties of ECG signals and find characteristics capable of differentiating between healthy and 15 min prior to seizure signals. The effectiveness of the proposed methodology for predicting an epileptic event is demonstrated using a database of seven patients with 10 epileptic seizures, which was provided by the Massachusetts Institute of Technology–Beth Israel Hospital (MIT–BIH). The results show that the proposed methodology is capable of predicting an epileptic seizure 15 min before with an accuracy of 100%. Our results suggest that the use of STFs at frequency bands related to heart activity to find parameters for the prediction of epileptic seizures is suitable.
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