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Kuhlisch C, Shemi A, Barak-Gavish N, Schatz D, Vardi A. Algal blooms in the ocean: hot spots for chemically mediated microbial interactions. Nat Rev Microbiol 2024; 22:138-154. [PMID: 37833328 DOI: 10.1038/s41579-023-00975-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 09/14/2023] [Indexed: 10/15/2023]
Abstract
The cycling of major nutrients in the ocean is affected by large-scale phytoplankton blooms, which are hot spots of microbial life. Diverse microbial interactions regulate bloom dynamics. At the single-cell level, interactions between microorganisms are mediated by small molecules in the chemical crosstalk that determines the type of interaction, ranging from mutualism to pathogenicity. Algae interact with viruses, bacteria, parasites, grazers and other algae to modulate algal cell fate, and these interactions are dependent on the environmental context. Recent advances in mass spectrometry and single-cell technologies have led to the discovery of a growing number of infochemicals - metabolites that convey information - revealing the ability of algal cells to govern biotic interactions in the ocean. The diversity of infochemicals seems to account for the specificity in cellular response during microbial communication. Given the immense impact of algal blooms on biogeochemical cycles and climate regulation, a major challenge is to elucidate how microscale interactions control the fate of carbon and the recycling of major elements in the ocean. In this Review, we discuss microbial interactions and the role of infochemicals in algal blooms. We further explore factors that can impact microbial interactions and the available tools to decipher them in the natural environment.
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Affiliation(s)
- Constanze Kuhlisch
- Department of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel
| | - Adva Shemi
- Department of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel
| | - Noa Barak-Gavish
- Department of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel
- Institute of Microbiology, ETH Zurich, Zurich, Switzerland
| | - Daniella Schatz
- Department of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel
| | - Assaf Vardi
- Department of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel.
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Botterell ZLR, Bergmann M, Hildebrandt N, Krumpen T, Steinke M, Thompson RC, Lindeque PK. Microplastic ingestion in zooplankton from the Fram Strait in the Arctic. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 831:154886. [PMID: 35364160 DOI: 10.1016/j.scitotenv.2022.154886] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/01/2021] [Revised: 03/24/2022] [Accepted: 03/24/2022] [Indexed: 06/14/2023]
Abstract
Some of the highest microplastic concentrations in marine environments have been reported from the Fram Strait in the Arctic. This region supports a diverse ecosystem dependent on high concentrations of zooplankton at the base of the food web. Zooplankton samples were collected during research cruises using Bongo and MOCNESS nets in the boreal summers of 2018 and 2019. Using FTIR scanning spectroscopy in combination with an automated polymer identification approach, we show that all five species of Arctic zooplankton investigated had ingested microplastics. Amphipod species, found in surface waters or closely associated with sea ice, had ingested significantly more microplastic per individual (Themisto libellula: 1.8, Themisto abyssorrum: 1, Apherusa glacialis: 1) than copepod species (Calanus hyperboreus: 0.21, Calanus glacialis/finmarchicus: 0.01). The majority of microplastics ingested were below 50 μm in size, all were fragments and several different polymer types were present. We quantified microplastics in water samples collected at six of the same stations as the Calanus using an underway sampling system (inlet at 6.5 m water depth). Fragments of several polymer types and anthropogenic cellulosic fibres were present, with an average concentration of 7 microplastic particles (MP) L-1 (0-18.5 MP L-1). In comparison to the water samples, those microplastics found ingested by zooplankton were significantly smaller, highlighting that the smaller-sized microplastics were being selected for by the zooplankton. High levels of microplastic ingestion in zooplankton have been associated with negative effects on growth, development, and fecundity. As Arctic zooplankton only have a short window of biological productivity, any negative effect could have broad consequences. As global plastic consumption continues to increase and climate change continues to reduce sea ice cover, releasing ice-bound microplastics and leaving ice free areas open to exploitation, the Arctic could be exposed to further plastic pollution which could place additional strain on this fragile ecosystem.
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Affiliation(s)
- Zara L R Botterell
- Marine Ecology and Biodiversity, Plymouth Marine Laboratory, Prospect Place, West Hoe, Plymouth PL1 3DH, UK; School of Life Sciences, University of Essex, Wivenhoe Park, Colchester CO4 3SQ, UK
| | - Melanie Bergmann
- HGF-MPG Joint Research Group for Deep-Sea Ecology and Technology, Alfred-Wegener-Institut Helmholtz-Zentrum für Polar - und Meeresforschung, Am Handelshafen 12, 27570 Bremerhaven, Germany
| | - Nicole Hildebrandt
- HGF-MPG Joint Research Group for Deep-Sea Ecology and Technology, Alfred-Wegener-Institut Helmholtz-Zentrum für Polar - und Meeresforschung, Am Handelshafen 12, 27570 Bremerhaven, Germany
| | - Thomas Krumpen
- Climate Sciences, Sea Ice Physics, Alfred-Wegener-Institut Helmholtz-Zentrum für Polar - und Meeresforschung, Bussestraße 24, 27570 Bremerhaven, Germany
| | - Michael Steinke
- School of Life Sciences, University of Essex, Wivenhoe Park, Colchester CO4 3SQ, UK
| | - Richard C Thompson
- Marine Biology and Ecology Research Centre (MBERC), School of Biological and Marine Sciences, University of Plymouth, Drake Circus, Plymouth PL4 8AA, UK
| | - Penelope K Lindeque
- Marine Ecology and Biodiversity, Plymouth Marine Laboratory, Prospect Place, West Hoe, Plymouth PL1 3DH, UK.
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Shemi A, Alcolombri U, Schatz D, Farstey V, Vincent F, Rotkopf R, Ben-Dor S, Frada MJ, Tawfik DS, Vardi A. Dimethyl sulfide mediates microbial predator-prey interactions between zooplankton and algae in the ocean. Nat Microbiol 2021; 6:1357-1366. [PMID: 34697459 DOI: 10.1038/s41564-021-00971-3] [Citation(s) in RCA: 24] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/01/2021] [Accepted: 09/01/2021] [Indexed: 12/11/2022]
Abstract
Phytoplankton are key components of the oceanic carbon and sulfur cycles1. During bloom events, some species can emit large amounts of the organosulfur volatile dimethyl sulfide (DMS) into the ocean and consequently the atmosphere, where it can modulate aerosol formation and affect climate2,3. In aquatic environments, DMS plays an important role as a chemical signal mediating diverse trophic interactions. Yet, its role in microbial predator-prey interactions remains elusive with contradicting evidence for its role in either algal chemical defence or in the chemo-attraction of grazers to prey cells4,5. Here we investigated the signalling role of DMS during zooplankton-algae interactions by genetic and biochemical manipulation of the algal DMS-generating enzyme dimethylsulfoniopropionate lyase (DL) in the bloom-forming alga Emiliania huxleyi6. We inhibited DL activity in E. huxleyi cells in vivo using the selective DL-inhibitor 2-bromo-3-(dimethylsulfonio)-propionate7 and overexpressed the DL-encoding gene in the model diatom Thalassiosira pseudonana. We showed that algal DL activity did not serve as an anti-grazing chemical defence but paradoxically enhanced predation by the grazer Oxyrrhis marina and other microzooplankton and mesozooplankton, including ciliates and copepods. Consumption of algal prey with induced DL activity also promoted O. marina growth. Overall, our results demonstrate that DMS-mediated grazing may be ecologically important and prevalent during prey-predator dynamics in aquatic ecosystems. The role of algal DMS revealed here, acting as an eat-me signal for grazers, raises fundamental questions regarding the retention of its biosynthetic enzyme through the evolution of dominant bloom-forming phytoplankton in the ocean.
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Affiliation(s)
- Adva Shemi
- Department of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel
| | - Uria Alcolombri
- Department of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel.,Institute of Environmental Engineering, Department of Civil, Environmental and Geomatic Engineering, ETH Zurich, Zurich, Switzerland
| | - Daniella Schatz
- Department of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel
| | - Viviana Farstey
- The Inter-University Institute for Marine Sciences, Eilat, Israel
| | - Flora Vincent
- Department of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel
| | - Ron Rotkopf
- Department of Life Sciences Core Facilities, Weizmann Institute of Science, Rehovot, Israel
| | - Shifra Ben-Dor
- Department of Life Sciences Core Facilities, Weizmann Institute of Science, Rehovot, Israel
| | - Miguel J Frada
- The Inter-University Institute for Marine Sciences, Eilat, Israel.,Department of Ecology, Evolution and Behavior, Alexander Silberman Institute of Life Sciences, Hebrew University of Jerusalem, Jerusalem, Israel
| | - Dan S Tawfik
- Department of Biomolecular Sciences, Weizmann Institute of Science, Rehovot, Israel
| | - Assaf Vardi
- Department of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel.
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Botterell ZLR, Beaumont N, Dorrington T, Steinke M, Thompson RC, Lindeque PK. Bioavailability and effects of microplastics on marine zooplankton: A review. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2019; 245:98-110. [PMID: 30415037 DOI: 10.1016/j.envpol.2018.10.065] [Citation(s) in RCA: 360] [Impact Index Per Article: 72.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/19/2018] [Revised: 10/12/2018] [Accepted: 10/13/2018] [Indexed: 05/02/2023]
Abstract
Microplastics are abundant and widespread in the marine environment. They are a contaminant of global environmental and economic concern. Due to their small size a wide range of marine species, including zooplankton can ingest them. Research has shown that microplastics are readily ingested by several zooplankton taxa, with associated negative impacts on biological processes. Zooplankton is a crucial food source for many secondary consumers, consequently this represents a route whereby microplastic could enter the food web and transfer up the trophic levels. In this review we aim to: 1) evaluate the current knowledge base regarding microplastic ingestion by zooplankton in both the laboratory and the field; and 2) summarise the factors which contribute to the bioavailability of microplastics to zooplankton. Current literature shows that microplastic ingestion has been recorded in 39 zooplankton species from 28 taxonomic orders including holo- and meroplanktonic species. The majority of studies occurred under laboratory conditions and negative effects were reported in ten studies (45%) demonstrating effects on feeding behaviour, growth, development, reproduction and lifespan. In contrast, three studies (14%) reported no negative effects from microplastic ingestion. Several physical and biological factors can influence the bioavailability of microplastics to zooplankton, such as size, shape, age and abundance. We identified that microplastics used in experiments are often different to those quantified in the marine environment, particularly in terms of concentration, shape, type and age. We therefore suggest that future research should include microplastics that are more representative of those found in the marine environment at relevant concentrations. Additionally, investigating the effects of microplastic ingestion on a broader range of zooplankton species and life stages, will help to answer key knowledge gaps regarding the effect of microplastic on recruitment, species populations and ultimately broader economic consequences such as impacts on shell- and finfish stocks.
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Affiliation(s)
- Zara L R Botterell
- Marine Ecology and Biodiversity, Plymouth Marine Laboratory, Prospect Place, West Hoe, Plymouth, PL1 3DH, UK; School of Biological Sciences, University of Essex, Wivenhoe Park, Colchester, CO4 3SQ, UK
| | - Nicola Beaumont
- Marine Ecology and Biodiversity, Plymouth Marine Laboratory, Prospect Place, West Hoe, Plymouth, PL1 3DH, UK
| | - Tarquin Dorrington
- Department for Environment, Food & Rural Affairs, Seacole Block, 2 Marsham Street, London, SW1P 4DF, UK
| | - Michael Steinke
- School of Biological Sciences, University of Essex, Wivenhoe Park, Colchester, CO4 3SQ, UK
| | - Richard C Thompson
- Marine Biology and Ecology Research Centre (MBERC), School of Biological and Marine Sciences, University of Plymouth, Drake Circus, Plymouth, PL4 8AA, UK
| | - Penelope K Lindeque
- Marine Ecology and Biodiversity, Plymouth Marine Laboratory, Prospect Place, West Hoe, Plymouth, PL1 3DH, UK.
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Procter J, Hopkins FE, Fileman ES, Lindeque PK. Smells good enough to eat: Dimethyl sulfide (DMS) enhances copepod ingestion of microplastics. MARINE POLLUTION BULLETIN 2019; 138:1-6. [PMID: 30660250 DOI: 10.1016/j.marpolbul.2018.11.014] [Citation(s) in RCA: 54] [Impact Index Per Article: 10.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/19/2018] [Revised: 11/07/2018] [Accepted: 11/08/2018] [Indexed: 06/09/2023]
Abstract
Marine copepods have been shown to readily ingest microplastics - a crucial first step in the transfer of plastics into the marine food chain. Copepods have also been shown to elicit a foraging behavioural response to the presence of olfactory stimuli, such as dimethyl sulfide (DMS) - a volatile compound produced by their algal prey. Here, we show that the temperate Calanoid copepod Calanus helgolandicus displays enhanced grazing rates of between 0.7 and 3-fold (72%-292%) on microplastics that have been infused in a DMS solution, compared to DMS-free controls. Environmental exposure of microplastics may result in the development of an olfactory signature that includes algal-derived compounds such as DMS. Our study provides evidence that copepods, which are known to use chemosensory mechanisms to identify and locate dense sources of palatable prey, may be at an increased risk of plastic ingestion if it mimics the scent of their prey.
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Affiliation(s)
- Jade Procter
- School of Marine Science and Engineering, University of Plymouth, Drake Circus, Plymouth, Devon PL4 8AA, UK; Plymouth Marine Laboratory, Prospect Place, Plymouth PL1 3DH, UK
| | | | - Elaine S Fileman
- Plymouth Marine Laboratory, Prospect Place, Plymouth PL1 3DH, UK
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Pančić M, Kiørboe T. Phytoplankton defence mechanisms: traits and trade-offs. Biol Rev Camb Philos Soc 2018; 93:1269-1303. [DOI: 10.1111/brv.12395] [Citation(s) in RCA: 95] [Impact Index Per Article: 15.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2017] [Revised: 12/21/2017] [Accepted: 12/22/2017] [Indexed: 01/22/2023]
Affiliation(s)
- Marina Pančić
- Centre for Ocean Life; Technical University of Denmark, DTU Aqua, Kemitorvet B201; Kongens Lyngby DK-2800 Denmark
| | - Thomas Kiørboe
- Centre for Ocean Life; Technical University of Denmark, DTU Aqua, Kemitorvet B201; Kongens Lyngby DK-2800 Denmark
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Abstract
Covering: January 2013 to online publication December 2014This review summarizes recent research in the chemical ecology of marine pelagic ecosystems, and aims to provide a comprehensive overview of advances in the field in the time period covered. In order to highlight the role of chemical cues and toxins in plankton ecology this review has been organized by ecological interaction types starting with intraspecific interactions, then interspecific interactions (including facilitation and mutualism, host-parasite, allelopathy, and predator-prey), and finally community and ecosystem-wide interactions.
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Affiliation(s)
- Emily R Schwartz
- School of Biology, Aquatic Chemical Ecology Center, Institute for Bioengineering and Biosciences, Georgia Institute of Technology, Atlanta, GA 30332-0230, USA.
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Selander E, Heuschele J, Nylund GM, Pohnert G, Pavia H, Bjærke O, Pender-Healy LA, Tiselius P, Kiørboe T. Solid phase extraction and metabolic profiling of exudates from living copepods. PeerJ 2016; 4:e1529. [PMID: 26788422 PMCID: PMC4715450 DOI: 10.7717/peerj.1529] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2015] [Accepted: 12/02/2015] [Indexed: 01/31/2023] Open
Abstract
Copepods are ubiquitous in aquatic habitats. They exude bioactive compounds that mediate mate finding or induce defensive traits in prey organisms. However, little is known about the chemical nature of the copepod exometabolome that contributes to the chemical landscape in pelagic habitats. Here we describe the development of a closed loop solid phase extraction setup that allows for extraction of exuded metabolites from live copepods. We captured exudates from male and female Temora longicornis and analyzed the content with high resolution LC-MS. Chemometric methods revealed 87 compounds that constitute a specific chemical pattern either qualitatively or quantitatively indicating copepod presence. The majority of the compounds were present in both female and male exudates, but nine compounds were mainly or exclusively present in female exudates and hence potential pheromone candidates. Copepodamide G, known to induce defensive responses in phytoplankton, was among the ten compounds of highest relative abundance in both male and female extracts. The presence of copepodamide G shows that the method can be used to capture and analyze chemical signals from living source organisms. We conclude that solid phase extraction in combination with metabolic profiling of exudates is a useful tool to develop our understanding of the chemical interplay between pelagic organisms.
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Affiliation(s)
- Erik Selander
- Department of Marine Sciences, University of Gothenburg,Göteborg, Sweden
- Centre for Ocean Life, National Institute of Aquatic Resources, Technical University of Denmark, Copenhagen, Denmark
| | - Jan Heuschele
- Centre for Ocean Life, National Institute of Aquatic Resources, Technical University of Denmark, Copenhagen, Denmark
| | - Göran M. Nylund
- Department of Marine Sciences, University of Gothenburg,Göteborg, Sweden
| | - Georg Pohnert
- Institute for Inorganic and Analytical Chemistry, Friedrich Schiller University, Jena, Germany
| | - Henrik Pavia
- Department of Marine Sciences, University of Gothenburg,Göteborg, Sweden
| | - Oda Bjærke
- Department of Biosciences, University of Oslo, Oslo, Norway
| | | | - Peter Tiselius
- Department of Biological and Environmental Sciences, University of Gothenburg, Göteborg, Sweden
| | - Thomas Kiørboe
- Centre for Ocean Life, National Institute of Aquatic Resources, Technical University of Denmark, Copenhagen, Denmark
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