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Gribble GW. Naturally Occurring Organohalogen Compounds-A Comprehensive Review. PROGRESS IN THE CHEMISTRY OF ORGANIC NATURAL PRODUCTS 2023; 121:1-546. [PMID: 37488466 DOI: 10.1007/978-3-031-26629-4_1] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 07/26/2023]
Abstract
The present volume is the third in a trilogy that documents naturally occurring organohalogen compounds, bringing the total number-from fewer than 25 in 1968-to approximately 8000 compounds to date. Nearly all of these natural products contain chlorine or bromine, with a few containing iodine and, fewer still, fluorine. Produced by ubiquitous marine (algae, sponges, corals, bryozoa, nudibranchs, fungi, bacteria) and terrestrial organisms (plants, fungi, bacteria, insects, higher animals) and universal abiotic processes (volcanos, forest fires, geothermal events), organohalogens pervade the global ecosystem. Newly identified extraterrestrial sources are also documented. In addition to chemical structures, biological activity, biohalogenation, biodegradation, natural function, and future outlook are presented.
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Affiliation(s)
- Gordon W Gribble
- Department of Chemistry, Dartmouth College, Hanover, NH, 03755, USA.
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Singh KS, Singh A. Chemical diversities, biological activities and chemical synthesis of marine diphenyl ether and their derivatives. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.133302] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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3
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Blanchfield J. Meet Our Editorial Board Member. Curr Drug Deliv 2021. [DOI: 10.2174/156720181804210324113757] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Affiliation(s)
- Joanne Blanchfield
- School of Chemistry and Molecular Biosciences, University of Queensland Brisbane, Australia
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Kristiana R, Bedoux G, Pals G, Mudianta IW, Taupin L, Marty C, Asagabaldan MA, Ayuningrum D, Trianto A, Bourgougnon N, Radjasa OK, Sabdono A, Hanafi M. Bioactivity of compounds secreted by symbiont bacteria of Nudibranchs from Indonesia. PeerJ 2020; 8:e8093. [PMID: 31915568 PMCID: PMC6942679 DOI: 10.7717/peerj.8093] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2019] [Accepted: 10/23/2019] [Indexed: 01/12/2023] Open
Abstract
The aims of this work are to isolate bacterial symbionts from nudibranchs and subsequently to determine anti-Methicillin resistant Staphylococcus aureus (MRSA), cytotoxicity and anti-Herpes simplex virus type 1 (HSV-1) activities of bio compounds. A total of 15 species of nudibranchs were collected from Karimunjawa and five species from Bali, respectively. A total of 245 bacteria isolates were obtained. The anti-MRSA activity screening activity indicated two active bacteria. Ethyl acetate extracts from supernatants, indicating extracelullar compounds, showed an inhibition zone against MRSA at concentrations of 500–1,000 µg/ml. DNA sequence analysis showed that the strain KJB-07 from Phyllidia coelestis was closely related to Pseudoalteromonas rubra, whereas the strain NP31-01 isolated from Phyllidia varicosa was closely related to Virgibacillus salarius. The extract of Pseudoalteromonas rubra was cytotoxic to Vero cells at a concentration of 75 µg/ml. The extract of V. salarius presented no cytotoxicity at concentrations of 5–1,000 µg/ml. No anti HSV-1 was observed for both isolated bacteria. This is the first study describing research on anti-MRSA, cytotoxicity and anti HSV-1 activity of bacterial symbionts from the viscera of nudibranch. Compounds produced by Pseudoalteromonas rubra and V. salarius, had potential anti-MRSA activity. However, only extracts from Pseudoalteromonas rubra showed cytotoxic effects on Vero cells. Three compounds were identified by LC/MS after purification from culture supernatant.
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Affiliation(s)
- Rhesi Kristiana
- Department of Coastal Resources Management, Universities Diponegoro, Semarang, Central Java, Indonesia
| | - Gilles Bedoux
- Laboratory of Marine Biotechnology and Chemistry, Université de Bretagne Sud, Vannes, Bretagne, France
| | - Gerard Pals
- Center for Connective Tissue research, VU University medical center, Amsterdam, The Netherlands
| | - I Wayan Mudianta
- Chemical Analysis Study Program, Universitas Pendidikan Ganesha, Singaraja, Bali, Indonesia
| | - Laure Taupin
- Laboratory of Marine Biotechnology and Chemistry, Université de Bretagne Sud, Vannes, Bretagne, France
| | - Christel Marty
- Laboratory of Marine Biotechnology and Chemistry, Université de Bretagne Sud, Vannes, Bretagne, France
| | | | - Diah Ayuningrum
- Department of Coastal Resources Management, Universities Diponegoro, Semarang, Central Java, Indonesia.,Department of Aquatic Resource Management, Diponegoro University, Semarang, Central Java, Indonesia
| | - Agus Trianto
- Department of Marine Sciences, Faculty of Fisheries and Marine Sciences, Universities Diponegoro, Semarang, Central Java, Indonesia
| | - Nathalie Bourgougnon
- Laboratory of Marine Biotechnology and Chemistry, Université de Bretagne Sud, Vannes, Bretagne, France
| | - Ocky Karna Radjasa
- Department of Marine Sciences, Faculty of Fisheries and Marine Sciences, Universities Diponegoro, Semarang, Central Java, Indonesia
| | - Agus Sabdono
- Department of Marine Sciences, Faculty of Fisheries and Marine Sciences, Universities Diponegoro, Semarang, Central Java, Indonesia
| | - Muhammad Hanafi
- Research Center for Chemistry, Indonesian Institute of Sciences., Tangerang Selatan, Banten, Indonesia.,Faculty of Pharmacy, Pancasila University, Srengseng Sawah Jakarta Selatan, Indonesia
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Utkina NK, Likhatskaya GN, Balabanova LA, Bakunina IY. Sponge-derived polybrominated diphenyl ethers and dibenzo-p-dioxins, irreversible inhibitors of the bacterial α-d-galactosidase. ENVIRONMENTAL SCIENCE. PROCESSES & IMPACTS 2019; 21:1754-1763. [PMID: 31532404 DOI: 10.1039/c9em00301k] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
An integrated in vitro and in silico approach was applied to evaluate the potency of hydroxylated polybrominated diphenyl ethers (OH-PBDEs) and spongiadioxins (OH-PBDDs) isolated from Dysidea sponges on the activity of the recombinant α-d-galactosidase of the GH36 family. It was revealed for the first time that all compounds rapidly and apparently irreversibly inhibited the bacterial α-d-galactosidase. The structure-activity relationship study in the series of OH-PBDEs showed that the presence of an additional hydroxyl group in 5 significantly enhanced the potency (IC50 4.26 μM); the increase of bromination in compounds from 1 to 3 increased their potency (IC50 41.8, 36.0, and 16.0 μM, respectively); the presence of a methoxy group decreased the potency (4, IC50 60.5 μM). Spongiadioxins 6, 7, and 8 (IC50 16.6, 33.1, and 28.6 μM, respectively) exhibited inhibitory action comparable to that of monohydroxylated diphenyl ethers 1-3. Docking analysis revealed that all compounds bind in a pocket close to the catalytic amino acid residues. Molecular docking detected significant compound-enzyme interactions in the binding sites of α-d-galactosidase. Superimposition of the enzyme-substrate and the enzyme-inhibitor complexes showed that their binding sites overlap.
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Affiliation(s)
- Natalia K Utkina
- G.B. Elyakov Pacific Institute of Bioorganic Chemistry, Far Eastern Branch, Russian Academy of Sciences, Vladivostok 690022, Russian Federation.
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Abstract
Covering: up to the end of February 2017Nudibranchs have attracted the attention of natural product researchers due to the potential for discovery of bioactive metabolites, in conjunction with the interesting predator-prey chemical ecological interactions that are present. This review covers the literature published on natural products isolated from nudibranchs up to February 2017 with species arranged taxonomically. Selected examples of metabolites obtained from nudibranchs across the full range of taxa are discussed, including their origins (dietary or biosynthetic) if known and biological activity.
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Affiliation(s)
- Lewis J Dean
- School of Science, University of Waikato, Hamilton 3240, New Zealand.
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