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For: Cao M, Fraser K, Rasmussen S. Computational analyses of spectral trees from electrospray multi-stage mass spectrometry to aid metabolite identification. Metabolites 2013;3:1036-50. [PMID: 24958264 PMCID: PMC3937840 DOI: 10.3390/metabo3041036] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2013] [Revised: 10/07/2013] [Accepted: 10/16/2013] [Indexed: 12/13/2022]  Open
Number Cited by Other Article(s)
1
Untargeted Multimodal Metabolomics Investigation of the Haemonchus contortus Exsheathment Secretome. Cells 2022;11:cells11162525. [PMID: 36010603 PMCID: PMC9406637 DOI: 10.3390/cells11162525] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2022] [Revised: 08/11/2022] [Accepted: 08/13/2022] [Indexed: 11/17/2022]  Open
2
LC–MS/MS method validation for the quantitation of 1-kestose in wheat flour. J Food Compost Anal 2021. [DOI: 10.1016/j.jfca.2021.103930] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
3
Desmet S, Brouckaert M, Boerjan W, Morreel K. Seeing the forest for the trees: Retrieving plant secondary biochemical pathways from metabolome networks. Comput Struct Biotechnol J 2020;19:72-85. [PMID: 33384856 PMCID: PMC7753198 DOI: 10.1016/j.csbj.2020.11.050] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2020] [Revised: 11/26/2020] [Accepted: 11/28/2020] [Indexed: 02/06/2023]  Open
4
Matthews ZM, Edwards PJB, Kahnt A, Collett MG, Marshall JC, Partridge AC, Harrison SJ, Fraser K, Cao M, Derrick PJ. Serum metabolomics using ultra performance liquid chromatography coupled to mass spectrometry in lactating dairy cows following a single dose of sporidesmin. Metabolomics 2018;14:61. [PMID: 29706850 PMCID: PMC5904237 DOI: 10.1007/s11306-018-1358-4] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 10/24/2017] [Accepted: 03/29/2018] [Indexed: 11/18/2022]
5
Parrot D, Intertaglia L, Jehan P, Grube M, Suzuki MT, Tomasi S. Chemical analysis of the Alphaproteobacterium strain MOLA1416 associated with the marine lichen Lichina pygmaea. PHYTOCHEMISTRY 2018;145:57-67. [PMID: 29091816 DOI: 10.1016/j.phytochem.2017.10.005] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/03/2017] [Revised: 09/26/2017] [Accepted: 10/14/2017] [Indexed: 06/07/2023]
6
Maleki H, Maurer MM, Ronaghi N, Valentine SJ. Ion Mobility, Hydrogen/Deuterium Exchange, and Isotope Scrambling: Tools to Aid Compound Identification in ‘Omics Mixtures. Anal Chem 2017;89:6399-6407. [PMID: 28505408 DOI: 10.1021/acs.analchem.7b00075] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
7
Gil de la Fuente A, Grace Armitage E, Otero A, Barbas C, Godzien J. Differentiating signals to make biological sense - A guide through databases for MS-based non-targeted metabolomics. Electrophoresis 2017;38:2242-2256. [PMID: 28426136 DOI: 10.1002/elps.201700070] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2017] [Revised: 03/17/2017] [Accepted: 03/17/2017] [Indexed: 12/21/2022]
8
Cao M, Fraser K, Jones C, Stewart A, Lyons T, Faville M, Barrett B. Untargeted Metabotyping Lolium perenne Reveals Population-Level Variation in Plant Flavonoids and Alkaloids. FRONTIERS IN PLANT SCIENCE 2017;8:133. [PMID: 28223996 PMCID: PMC5293862 DOI: 10.3389/fpls.2017.00133] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/26/2016] [Accepted: 01/23/2017] [Indexed: 05/07/2023]
9
Roche J, Love J, Guo Q, Song J, Cao M, Fraser K, Huege J, Jones C, Novák O, Turnbull MH, Jameson PE. Metabolic changes and associated cytokinin signals in response to nitrate assimilation in roots and shoots of Lolium perenne. PHYSIOLOGIA PLANTARUM 2016;156:497-511. [PMID: 26661753 DOI: 10.1111/ppl.12412] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/28/2015] [Revised: 11/14/2015] [Accepted: 11/16/2015] [Indexed: 05/11/2023]
10
Vaniya A, Fiehn O. Using fragmentation trees and mass spectral trees for identifying unknown compounds in metabolomics. Trends Analyt Chem 2015;69:52-61. [PMID: 26213431 PMCID: PMC4509603 DOI: 10.1016/j.trac.2015.04.002] [Citation(s) in RCA: 97] [Impact Index Per Article: 10.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
11
Cao M, Fraser K, Huege J, Featonby T, Rasmussen S, Jones C. Predicting retention time in hydrophilic interaction liquid chromatography mass spectrometry and its use for peak annotation in metabolomics. Metabolomics 2014;11:696-706. [PMID: 25972771 PMCID: PMC4419193 DOI: 10.1007/s11306-014-0727-x] [Citation(s) in RCA: 63] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 06/25/2014] [Accepted: 08/28/2014] [Indexed: 01/14/2023]
12
Donohoe GC, Maleki H, Arndt JR, Khakinejad M, Yi J, McBride C, Nurkiewicz TR, Valentine SJ. A new ion mobility-linear ion trap instrument for complex mixture analysis. Anal Chem 2014;86:8121-8. [PMID: 25068446 DOI: 10.1021/ac501527y] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
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