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Wang Z, Gao Z, Yu Y, Li H, Luo W, Ji Z, Ding H. New insights into the structure and function of microbial communities in Maxwell Bay, Antarctica. Front Microbiol 2024; 15:1463144. [PMID: 39296290 PMCID: PMC11408308 DOI: 10.3389/fmicb.2024.1463144] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2024] [Accepted: 08/23/2024] [Indexed: 09/21/2024] Open
Abstract
The microbial communities inhabiting polar ecosystems, particularly in Maxwell Bay, Antarctica, play a pivotal role in nutrient cycling and ecosystem dynamics. However, the diversity of these microbial communities remains underexplored. In this study, we aim to address this gap by investigating the distribution, environmental drivers, and metabolic potential of microorganisms in Maxwell Bay. We analyzed the prokaryotic and eukaryotic microbiota at 11 stations, revealing distinctive community structures and diverse phylum dominance by using high-throughput sequencing. Spatial analysis revealed a significant impact of longitude on microbial communities, with microeukaryotes exhibiting greater sensitivity to spatial factors than microprokaryotes. We constructed co-occurrence networks to explore the stability of microbial communities, indicating the complexity and stability of microprokaryotic communities compared with those of microeukaryotes. Our findings suggest that the microeukaryotic communities in Maxwell Bay are more susceptible to disturbances. Additionally, this study revealed the spatial correlations between microbial communities, diversity, and environmental variables. Redundancy analysis highlighted the significance of pH and dissolved oxygen in shaping microprokaryotic and microeukaryotic communities, indicating the anthropogenic influence near the scientific research stations. Functional predictions using Tax4Fun2 and FUNGuild revealed the metabolic potential and trophic modes of the microprokaryotic and microeukaryotic communities, respectively. Finally, this study provides novel insights into the microbial ecology of Maxwell Bay, expanding the understanding of polar microbiomes and their responses to environmental factors.
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Affiliation(s)
- Zheng Wang
- Antarctic Great Wall Ecology National Observation and Research Station, Polar Research Institute of China, Ministry of Natural Resources, Shanghai, China
- Key Laboratory for Polar Science, Polar Research Institute of China, Ministry of Natural Resources, Shanghai, China
| | - Zhiwei Gao
- Antarctic Great Wall Ecology National Observation and Research Station, Polar Research Institute of China, Ministry of Natural Resources, Shanghai, China
- Key Laboratory for Polar Science, Polar Research Institute of China, Ministry of Natural Resources, Shanghai, China
| | - Yong Yu
- Antarctic Great Wall Ecology National Observation and Research Station, Polar Research Institute of China, Ministry of Natural Resources, Shanghai, China
- Key Laboratory for Polar Science, Polar Research Institute of China, Ministry of Natural Resources, Shanghai, China
- School of Oceanography, Shanghai Jiao Tong University, Shanghai, China
| | - Huirong Li
- Antarctic Great Wall Ecology National Observation and Research Station, Polar Research Institute of China, Ministry of Natural Resources, Shanghai, China
- Key Laboratory for Polar Science, Polar Research Institute of China, Ministry of Natural Resources, Shanghai, China
- School of Oceanography, Shanghai Jiao Tong University, Shanghai, China
| | - Wei Luo
- Antarctic Great Wall Ecology National Observation and Research Station, Polar Research Institute of China, Ministry of Natural Resources, Shanghai, China
- Key Laboratory for Polar Science, Polar Research Institute of China, Ministry of Natural Resources, Shanghai, China
- School of Oceanography, Shanghai Jiao Tong University, Shanghai, China
| | - Zhongqiang Ji
- Key Laboratory of Marine Ecosystem Dynamics, Second Institute of Oceanography, Ministry of Natural Resources, Hangzhou, China
| | - Haitao Ding
- Antarctic Great Wall Ecology National Observation and Research Station, Polar Research Institute of China, Ministry of Natural Resources, Shanghai, China
- Key Laboratory for Polar Science, Polar Research Institute of China, Ministry of Natural Resources, Shanghai, China
- School of Oceanography, Shanghai Jiao Tong University, Shanghai, China
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Zenteno-Devaud L, Aguirre-Martinez GV, Andrade C, Cárdenas L, Pardo LM, González HE, Garrido I. Feeding Ecology of Odontaster validus under Different Environmental Conditions in the West Antarctic Peninsula. BIOLOGY 2022; 11:biology11121723. [PMID: 36552233 PMCID: PMC9775070 DOI: 10.3390/biology11121723] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/29/2022] [Revised: 11/22/2022] [Accepted: 11/22/2022] [Indexed: 11/29/2022]
Abstract
To study how Odontaster validus can influence the spatial structure of Antarctic benthic communities and how they respond to disturbance, it is necessary to assess potential dietary shifts in different habitats. We investigated the diets of O. validus from Maxwell Bay and South Bay in the West Antarctic Peninsula. A multifaceted approach was applied including in situ observations of cardiac stomach everted contents, isotopic niche, and trophic diversity metrics. Results confirm the flexible foraging strategy of this species under markedly different environmental conditions, suggesting plasticity in resource use. The data also showed evidence of isotopic niche expansion, high δ15N values, and Nacella concinna as a common food item for individuals inhabiting a site with low seasonal sea ice (Ardley Cove), which could have significant ecological implications such as new trophic linkages within the Antarctic benthic community. These results highlight the importance of considering trophic changes of key species to their environment as multiple ecological factors can vary as a function of climatic conditions.
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Affiliation(s)
- Lisette Zenteno-Devaud
- Departamento de Ecología, Facultad de Ciencias, Universidad Católica de la Santísima Concepción, Concepción 4081112, Chile
- Correspondence: (L.Z.-D.); (G.V.A.-M.)
| | - Gabriela V. Aguirre-Martinez
- Química y Farmacia, Facultad de Ciencias de la Salud, Universidad Arturo Prat, Iquique 1110939, Chile
- Correspondence: (L.Z.-D.); (G.V.A.-M.)
| | - Claudia Andrade
- Laboratorio de Ecología Funcional, Instituto de la Patagonia, Universidad de Magallanes, Punta Arenas 6210738, Chile
| | - Leyla Cárdenas
- Facultad de Ciencias, Universidad Austral de Chile, Valdivia 5110566, Chile
- Centro FONDAP de Investigación de Dinámica de Ecosistemas Marinos de Altas Latitudes (IDEAL), Universidad Austral de Chile, Valdivia 5110566, Chile
| | - Luis Miguel Pardo
- Facultad de Ciencias, Universidad Austral de Chile, Valdivia 5110566, Chile
- Centro FONDAP de Investigación de Dinámica de Ecosistemas Marinos de Altas Latitudes (IDEAL), Universidad Austral de Chile, Valdivia 5110566, Chile
| | - Humberto E. González
- Facultad de Ciencias, Universidad Austral de Chile, Valdivia 5110566, Chile
- Centro FONDAP de Investigación de Dinámica de Ecosistemas Marinos de Altas Latitudes (IDEAL), Universidad Austral de Chile, Valdivia 5110566, Chile
| | - Ignacio Garrido
- Centro FONDAP de Investigación de Dinámica de Ecosistemas Marinos de Altas Latitudes (IDEAL), Universidad Austral de Chile, Valdivia 5110566, Chile
- Laboratorio Costero de Recursos Acuáticos de Calfuco (LCRAC), Facultad de Ciencias, Universidad Austral de Chile, Valdivia 5110566, Chile
- Québec-Océan, Département de Biologie, Université Laval, Québec City, QC G1V 0A6, Canada
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Maturana-Martínez C, Iriarte JL, Ha SY, Lee B, Ahn IY, Vernet M, Cape M, Fernández C, González HE, Galand PE. Biogeography of Southern Ocean Active Prokaryotic Communities Over a Large Spatial Scale. Front Microbiol 2022; 13:862812. [PMID: 35592001 PMCID: PMC9111744 DOI: 10.3389/fmicb.2022.862812] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2022] [Accepted: 03/18/2022] [Indexed: 12/04/2022] Open
Abstract
The activity of marine microorganisms depends on community composition, yet, in some oceans, less is known about the environmental and ecological processes that structure their distribution. The objective of this study was to test the effect of geographical distance and environmental parameters on prokaryotic community structure in the Southern Ocean (SO). We described the total (16S rRNA gene) and the active fraction (16S rRNA-based) of surface microbial communities over a ~6,500 km longitudinal transect in the SO. We found that the community composition of the total fraction was different from the active fraction across the zones investigated. In addition, higher α-diversity and stronger species turnover were displayed in the active community compared to the total community. Oceanospirillales, Alteromonadales, Rhodobacterales, and Flavobacteriales dominated the composition of the bacterioplankton communities; however, there were marked differences at the order level. Temperature, salinity, silicic acid, particulate organic nitrogen, and particulate organic carbon correlated with the composition of bacterioplankton communities. A strong distance–decay pattern between closer and distant communities was observed. We hypothesize that it was related to the different oceanic fronts present in the Antarctic Circumpolar Current. Our findings contribute to a better understanding of the complex arrangement that shapes the structure of bacterioplankton communities in the SO.
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Affiliation(s)
- Claudia Maturana-Martínez
- Centro de Investigación Dinámica de Ecosistemas Marinos de Altas Latitudes (IDEAL) and Universidad Austral de Chile, Valdivia, Chile.,Sorbonne Université, CNRS, Laboratoire d'Ecogéochimie des Environnements Benthiques, Banyuls-sur-Mer, France
| | - José Luis Iriarte
- Centro de Investigación Dinámica de Ecosistemas Marinos de Altas Latitudes (IDEAL) and Universidad Austral de Chile, Valdivia, Chile
| | - Sun-Yong Ha
- Division of Polar Ocean Science, Korea Polar Research Institute, Incheon, South Korea
| | - Boyeon Lee
- Division of Polar Ocean Science, Korea Polar Research Institute, Incheon, South Korea
| | - In-Young Ahn
- Division of Polar Ocean Science, Korea Polar Research Institute, Incheon, South Korea
| | - Maria Vernet
- Scripps Institution of Oceanography, University of California, San Diego, San Diego, CA, United States
| | - Mattias Cape
- School of Oceanography, University of Washington, Seattle, WA, United States
| | - Camila Fernández
- Sorbonne Université, CNRS, Laboratoire d'Océanographie Microbienne (LOMIC), Banyuls-sur-Mer, France
| | - Humberto E González
- Centro de Investigación Dinámica de Ecosistemas Marinos de Altas Latitudes (IDEAL) and Universidad Austral de Chile, Valdivia, Chile
| | - Pierre E Galand
- Sorbonne Université, CNRS, Laboratoire d'Ecogéochimie des Environnements Benthiques, Banyuls-sur-Mer, France
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Kim BM, Lee Y, Hwang JY, Kim YK, Kim TW, Kim IN, Kang S, Kim JH, Rhee JS. Physiological and molecular responses of the Antarctic harpacticoid copepod Tigriopus kingsejongensis to salinity fluctuations - A multigenerational study. ENVIRONMENTAL RESEARCH 2022; 204:112075. [PMID: 34536374 DOI: 10.1016/j.envres.2021.112075] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/26/2021] [Revised: 09/02/2021] [Accepted: 09/13/2021] [Indexed: 06/13/2023]
Abstract
Since Antarctica and the surrounding Southern Ocean are facing global climate change, biota inhabiting those coastal regions is now challenged by environmental fluctuations including coastal freshening. In this study, the effects of salinity range of 0-75 (practical salinity unit, PSU) on the Antarctic harpacticoid copepod Tigriopus kingsejongensis was investigated by measurement of 96 h survival rate, lifespan, and sex ratio with further analysis of multigenerational growth parameters and mRNA expressions under salinity of 15-45. Different stages of the copepods (i.e., nauplius, male, and female) generally showed tolerance to hypo- and hypersalinity, wherein female copepods were more tolerant than males when exposed to salinity fluctuations. Lifespan was significantly shortened by hypo- and hypersalinity compared to control salinity (34), but there was no significant difference in the sex ratio between salinity treatments. Multigenerational experiments across five generations revealed that exposure to salinities of 15 and 45 reduced body length compared to that in control salinity and the first generation of each salinity group. Our results provide evidence regarding T. kingsejongensis on their preferred salinity ranges, physiological limit to salinity fluctuations, and population dynamics in future salinity.
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Affiliation(s)
- Bo-Mi Kim
- Research Unit of Cryogenic Novel Material, Korea Polar Research Institute, Incheon, 21990, South Korea
| | - Yeonhui Lee
- Department of Marine Science, College of Natural Sciences, Incheon National University, Incheon, 22012, South Korea
| | - Jhee-Yeong Hwang
- Department of Marine Science, College of Natural Sciences, Incheon National University, Incheon, 22012, South Korea
| | - Young-Ki Kim
- Division of Ocean Sciences, Korea Polar Research Institute, Incheon, 21990, South Korea
| | - Tae Wan Kim
- Division of Ocean Sciences, Korea Polar Research Institute, Incheon, 21990, South Korea
| | - Il-Nam Kim
- Department of Marine Science, College of Natural Sciences, Incheon National University, Incheon, 22012, South Korea; Research Institute of Basic Sciences, Incheon National University, Incheon, 22012, South Korea; Yellow Sea Research Institute, Incheon, 21999, South Korea
| | - Seunghyun Kang
- Division of Life Sciences, Korea Polar Research Institute, Incheon, 21990, South Korea
| | - Jin-Hyoung Kim
- Division of Life Sciences, Korea Polar Research Institute, Incheon, 21990, South Korea
| | - Jae-Sung Rhee
- Department of Marine Science, College of Natural Sciences, Incheon National University, Incheon, 22012, South Korea; Research Institute of Basic Sciences, Incheon National University, Incheon, 22012, South Korea; Yellow Sea Research Institute, Incheon, 21999, South Korea.
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Collection of Environmental Variables and Bacterial Community Compositions in Marian Cove, Antarctica, during Summer 2018. DATA 2021. [DOI: 10.3390/data6030027] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
Abstract
Marine bacteria, which are known as key drivers for marine biogeochemical cycles and Earth’s climate system, are mainly responsible for the decomposition of organic matter and production of climate-relevant gases (i.e., CO₂, N₂O, and CH₄). However, research is still required to fully understand the correlation between environmental variables and bacteria community composition. Marine bacteria living in the Marian Cove, where the inflow of freshwater has been rapidly increasing due to substantial glacial retreat, must be undergoing significant environmental changes. During the summer of 2018, we conducted a hydrographic survey to collect environmental variables and bacterial community composition data at three different layers (i.e., the seawater surface, middle, and bottom layers) from 15 stations. Of all the bacterial data, 17 different phylum level bacteria and 21 different class level bacteria were found and Proteobacteria occupy 50.3% at phylum level following Bacteroidetes. Gammaproteobacteria and Alphaproteobacteria, which belong to Proteobacteria, are the highest proportion at the class level. Gammaproteobacteria showed the highest relative abundance in all three seawater layers. The collection of environmental variables and bacterial composition data contributes to improving our understanding of the significant relationships between marine Antarctic regions and marine bacteria that lives in the Antarctic.
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Default versus Configured-Geostatistical Modeling of Suspended Particulate Matter in Potter Cove, West Antarctic Peninsula. FLUIDS 2020. [DOI: 10.3390/fluids5040235] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
The glacier retreat observed during the last decades at Potter Cove (PC) causes an increasing amount of suspended particulate matter (SPM) in the water column, which has a high impact on sessile filter feeder’ species at PC located at the West Antarctic Peninsula. SPM presents a highly-fluctuating dynamic pattern on a daily, monthly, seasonal, and interannual basis. Geostatistical interpolation techniques are widely used by default to generate reliable spatial information and thereby to improve the ecological understanding of environmental variables, which is often fundamental for guiding decision-makers and scientists. In this study, we compared the results of default and configured settings of three geostatistical algorithms (Simple Kriging, Ordinary Kriging, and Empirical Bayesian) and developed a performance index. In order to interpolate SPM data from the summer season 2010/2011 at PC, the best performance was obtained with Empirical Bayesian Kriging (standard mean = −0.001 and root mean square standardized = 0.995). It showed an excellent performance (performance index = 0.004), improving both evaluation parameters when radio and neighborhood were configured. About 69% of the models showed improved standard means when configured compared to the default settings following a here proposed guideline.
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