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Iglesias A, Martínez L, Torrent D, Porcar M. The microwave bacteriome: biodiversity of domestic and laboratory microwave ovens. Front Microbiol 2024; 15:1395751. [PMID: 39176272 PMCID: PMC11338789 DOI: 10.3389/fmicb.2024.1395751] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2024] [Accepted: 06/19/2024] [Indexed: 08/24/2024] Open
Abstract
Microwaves have become an essential part of the modern kitchen, but their potential as a reservoir for bacterial colonization and the microbial composition within them remain largely unexplored. In this study, we investigated the bacterial communities in microwave ovens and compared the microbial composition of domestic microwaves, microwaves used in shared large spaces, and laboratory microwaves, using next-generation sequencing and culturing techniques. The microwave oven bacterial population was dominated by Proteobacteria, Firmicutes, Actinobacteria, and Bacteroidetes, similar to the bacterial composition of human skin. Comparison with other environments revealed that the bacterial composition of domestic microwaves was similar to that of kitchen surfaces, whereas laboratory microwaves had a higher abundance of taxa known for their ability to withstand microwave radiation, high temperatures and desiccation. These results suggest that different selective pressures, such as human contact, nutrient availability and radiation levels, may explain the differences observed between domestic and laboratory microwaves. Overall, this study provides valuable insights into microwave ovens bacterial communities and their potential biotechnological applications.
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Affiliation(s)
- Alba Iglesias
- Institute for Integrative Systems Biology (I2SysBio), University of Valencia-CSIC, Valencia, Spain
| | - Lorena Martínez
- Institute for Integrative Systems Biology (I2SysBio), University of Valencia-CSIC, Valencia, Spain
| | | | - Manuel Porcar
- Institute for Integrative Systems Biology (I2SysBio), University of Valencia-CSIC, Valencia, Spain
- Darwin Bioprospecting Excellence S.L., Valencia, Spain
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2
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Cao Y, Yuan S, Pang L, Xie J, Gao Y, Zhang J, Zhao Z, Yao S. Study on microbial diversity of washing machines. Biodegradation 2024:10.1007/s10532-023-10069-8. [PMID: 38733426 DOI: 10.1007/s10532-023-10069-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2023] [Accepted: 12/18/2023] [Indexed: 05/13/2024]
Abstract
Health and environmental protection are the development trend of household appliances, coupled with the impact of the COVID-19 epidemic in the past few years. Consumers have unprecedented concerns and expectations about the sterilization and disinfection functions of household appliances. As a washing and nursing equipment for household clothes, the anti-bacterial technology of washing machine has developed rapidly. The new models of washing machines in the market have basically added the function of sterilization. In order to thoroughly solve the problem of sterilization and bacteriostasis of washing machines from the source, the distribution of microbial contamination in washing machines should be fully investigated. At present, there is almost no systematic study on the microbial community structure in washing machines in China. Therefore, the purpose of this study is to analyze the bacterial community structure in Chinese household washing machines. To explore the key factors affecting the bacterial community structure of washing machines. Bacterial communities were comprehensively analyzed by high throughput sequencing. Using chao and shannon indexes as indicators, one-way ANOVA was used to explore the key factors affecting the bacterial community structure of washing machines. A total of 2,882,778 tags and 21,265 OTUs from 522 genera were sequenced from 56 washing machine samples. Genus Mycobacterium, Pseudomonas, Brevundimonas, Sphingomonas, Sphingobium, Enhydrobacter, Methylobacterium, Pseudoxanthomonas, Stenotrophomonas and Sphingopyxis were the top ten bacteria genera in abundance. The effects of sources, types, frequency of utilization, sampling locations and service life of washing machines on bacterial diversity in washing machine were systematically analyzed. The statistical analysis showed that service life was an important factor affecting bacterial diversity in washing machine. Our study lays a foundation for directional screening of characteristic microorganisms with targeted characters including malodor-producing, fouling, pathogenic and stress-resistance, the antibacterial evaluation, metabolic mechanism of key characteristic microorganisms as well as antibacterial materials development. At present, the sterilization technology of washing machines has not been fully in combination with the distribution survey of microorganisms in washing machines. According to the specific microorganism distribution condition of the washing machine, the key distribution positions and the types of specific microorganisms contained in different positions, conduct more targeted sterilization treatment. This will help to completely solve the problem of microbial growth in washing machines from the source.
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Affiliation(s)
- Yunyi Cao
- Wuxi Little Swan Electric Co., Ltd., Wuxi, China
| | - Shuai Yuan
- China Standardization Technology Service (Qingdao) Co., Ltd., Qingdao, China
| | - Lingling Pang
- China Standardization Technology Service (Qingdao) Co., Ltd., Qingdao, China.
| | - Jiuyan Xie
- China Center of Industrial Culture Collection (CICC), China National Research Institute of Food and Fermentation Industries, Beijing, China
| | - Yi Gao
- China Center of Industrial Culture Collection (CICC), China National Research Institute of Food and Fermentation Industries, Beijing, China
| | - Jian Zhang
- China Center of Industrial Culture Collection (CICC), China National Research Institute of Food and Fermentation Industries, Beijing, China
| | - Zhenyao Zhao
- China Center of Industrial Culture Collection (CICC), China National Research Institute of Food and Fermentation Industries, Beijing, China
| | - Su Yao
- China Center of Industrial Culture Collection (CICC), China National Research Institute of Food and Fermentation Industries, Beijing, China.
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3
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Sun D, Sun W, Tang L, Huang W, Zhang Z. Bacterial Contamination in the Different Parts of Household Washing Machine: New Insights from Chengdu, Western China. Curr Microbiol 2024; 81:114. [PMID: 38478167 DOI: 10.1007/s00284-024-03630-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2023] [Accepted: 01/31/2024] [Indexed: 04/23/2024]
Abstract
The moist and warm environment in the household washing machine provides ideal living conditions for the growth and survival of various microorganisms. However, the biodiversity of bacterial community in the different parts of washing machine from Chinese households has not been clarified. In this study, we assessed the bacterial communities in sealing strip, detergent drawer, inner drum, water filter and greywater of ten domestic washing machines quantitatively and qualitatively in Chengdu, southwestern China. The microbial cultivation results indicated that the washing machines from Chengdu had a severe microbial contamination reflected by large counts on bacteria, fungi and coliform. Furthermore, the sequencing data showed that the different parts displayed distinctive bacterial compositions. At the level of genus, the anaerobic bacteria of Caproiciproducens and Acidipropionibacterium were predominant in sealing strip. Barnesiella, Shinella and Sellimonas were detected as the characteristic bacteria in detergent drawer. The pathogens of Luteibacter and Corynebacterium at the genus level were the dominant bacteria in inner drum and water filter, respectively. The genera of Azospira, Roseococcus, Elstera and Aquicella, which belonged to the pathogenic phylum of Proteobacteria, were identified as bioindicators for the greywater. Gene function analysis on the sequencing data illustrated that the bacteria from washing machines were potentially associated with bacterial infectious diseases and antimicrobial resistance. This study shows the bacterial diversity in the different parts of washing machines, providing new clues for bacterial contamination in washing machines from Chinese households.
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Affiliation(s)
- Donglei Sun
- Molecular Toxicology Key Laboratory of Sichuan Provincial Education office, West China School of Public Health and West China Fourth Hospital, Sichuan University, Chengdu, 610041, China
| | - Weilian Sun
- Department of Environmental and Occupational Health, West China, School of Public Health and West China Fourth Hospital, Sichuan University, Chengdu, 610041, China
| | - Li Tang
- Department of Environmental and Occupational Health, West China, School of Public Health and West China Fourth Hospital, Sichuan University, Chengdu, 610041, China
| | - Wei Huang
- Department of Environmental and Occupational Health, West China, School of Public Health and West China Fourth Hospital, Sichuan University, Chengdu, 610041, China
| | - Zunzhen Zhang
- Department of Environmental and Occupational Health, West China, School of Public Health and West China Fourth Hospital, Sichuan University, Chengdu, 610041, China.
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4
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Kok CR, Bram Z, Thissen JB, Horseman TS, Fong KSK, Reichert-Scrivner SA, Paguirigan C, O'Connor K, Thompson K, Scheiber AE, Mabery S, Ngauy V, Uyehara CF, Be NA. The military gear microbiome: risk factors surrounding the warfighter. Appl Environ Microbiol 2024; 90:e0117623. [PMID: 38170999 PMCID: PMC10807412 DOI: 10.1128/aem.01176-23] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2023] [Accepted: 11/16/2023] [Indexed: 01/05/2024] Open
Abstract
Combat extremity wounds are highly susceptible to contamination from surrounding environmental material. This bioburden could be partially transferred from materials in immediate proximity to the wound, including fragments of the uniform and gear. However, the assessment of the microbial bioburden present on military gear during operational conditions of deployment or training is relatively unexplored. Opportunistic pathogens that can survive on gear represent risk factors for infection following injury, especially following combat blasts, where fibers and other materials are embedded in wounded tissue. We utilized 16S rRNA sequencing to assess the microbiome composition of different military gear types (boot, trouser, coat, and canteen) from two operational environments (training in Hawai'i and deployed in Indonesia) across time (days 0 and 14). We found that microbiome diversity, stability, and composition were dependent on gear type, training location, and sampling timepoint. At day 14, species diversity was significantly higher in Hawai'i samples compared to Indonesia samples for boot, coat, and trouser swabs. In addition, we observed the presence of potential microbial risk factors, as opportunistic pathogenic species, such as Acinetobacter, Pseudomonas, and Staphylococcus, were found to be present in all sample types and in both study sites. These study outcomes will be used to guide the design of antimicrobial materials and uniforms and for infection control efforts following combat blasts and other injuries, thereby improving treatment guidance during military training and deployment.IMPORTANCECombat extremity wounds are vulnerable to contamination from environments of proximity to the warfighter, leading to potential detrimental outcomes such as infection and delayed wound healing. Therefore, microbial surveillance of such environments is necessary to aid the advancement of military safety and preparedness through clinical diagnostics, treatment protocols, and uniform material design.
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Affiliation(s)
- Car Reen Kok
- Physical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, California, USA
| | | | - James B. Thissen
- Physical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, California, USA
| | - Timothy S. Horseman
- Tripler Army Medical Center, Honolulu, Hawaii, USA
- School of Medicine, Uniformed Services University of the Health Sciences, Bethesda, Maryland, USA
| | | | | | | | | | | | | | - Shalini Mabery
- Physical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, California, USA
| | - Viseth Ngauy
- Tripler Army Medical Center, Honolulu, Hawaii, USA
| | | | - Nicholas A. Be
- Physical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, California, USA
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Zareshahrabadi Z, Amirzadeh N, Pakshir K, Nasr R, Mohammadi R, Zomorodian K. Evaluation of building washing machines as an extreme environment for potentially pathogenic fungi. Sci Rep 2023; 13:21408. [PMID: 38049507 PMCID: PMC10695939 DOI: 10.1038/s41598-023-48598-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2023] [Accepted: 11/28/2023] [Indexed: 12/06/2023] Open
Abstract
Washing machines are commonly used in households and are considered indispensable appliances for maintaining cleanliness and hygiene. Environmental conditions within household washing machines are ideal for fungal colonization, which may pose risks to human health and contribute to sick building syndrome. This study aimed to investigate the fungal species contamination in the building washing machines. A total of 50 building washing machines were swab-sampled at three locations: the detergent drawer, the inner and outer parts of the rubber door seal. The housekeeping conditions of these appliances were assessed through a questionnaire. The isolated fungi were identified using standard mycological diagnostic procedures and molecular analysis based on the ITS1/ITS4 and β-tubulin gene regions. The possibility of fungal agents transferring from contaminated washing machines to autoclaved clothes during laundry cycles was investigated. Fungi were detected in 82% of the sampled appliances, with the inner rubber door seal being the most frequently colonized area. Using conventional and molecular techniques, we identified 122 fungal isolates, encompassing 17 diverse genera of molds, yeast-like, and yeast fungi. The mold fungi included 14 genera of hyaline and black genus. Among these, the most frequently identified genera of hyaline and black fungi were Aspergillus (27.7%), and Cladosporium (10.7%), respectively. This study demonstrates that building washing machines may serve as suitable ecological niches for fungal growth and transmission. Therefore, regular cleaning and disinfection of these devices are necessary.
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Affiliation(s)
- Zahra Zareshahrabadi
- Basic Sciences in Infectious Diseases Research Center, Shiraz University of Medical Sciences, Shiraz, Iran
| | - Neda Amirzadeh
- Department of Medical Parasitology and Mycology, School of Medicine, Shiraz University of Medical Sciences, Shiraz, Iran
| | - Keyvan Pakshir
- Basic Sciences in Infectious Diseases Research Center, Shiraz University of Medical Sciences, Shiraz, Iran
- Department of Medical Parasitology and Mycology, School of Medicine, Shiraz University of Medical Sciences, Shiraz, Iran
| | - Reza Nasr
- Department of Medical Parasitology and Mycology, School of Medicine, Shiraz University of Medical Sciences, Shiraz, Iran
| | - Rasoul Mohammadi
- Department of Medical Parasitology and Mycology, School of Medicine, Infectious Diseases and Tropical Medicine Research Center, Isfahan University of Medical Sciences, Isfahan, Iran
| | - Kamiar Zomorodian
- Basic Sciences in Infectious Diseases Research Center, Shiraz University of Medical Sciences, Shiraz, Iran.
- Department of Medical Parasitology and Mycology, School of Medicine, Shiraz University of Medical Sciences, Shiraz, Iran.
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Masselter T, Schaumann U, Kampowski T, Ulrich K, Thielen M, Bold G, Speck T. Improvement of a microfiber filter for domestic washing machines. BIOINSPIRATION & BIOMIMETICS 2022; 18:016017. [PMID: 36582181 DOI: 10.1088/1748-3190/acaba2] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/13/2022] [Accepted: 12/14/2022] [Indexed: 06/17/2023]
Abstract
The development of enhanced processes for filtration is one solution for stopping the increasing freshwater and sea pollution caused by microplastic and microfibers. Major contributors to micro-X pollution are domestic devices such as washing machines, which also hold a high technical potential for separating problematic soils from waste water during cleaning cycles. The focus of the present paper are the biomimetic development of a novel concept for filtration and removal of particles such as microfibers in conventional washing machines. To this goal, a TRIZ analysis yielded viable solutions for the major key issues. In a next step, measurements were made with various filters with and without ribbed structures. The results are promising for the incorporation in a filter concept that is easy to operate and cost-effective.
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Affiliation(s)
- Tom Masselter
- University of Freiburg, Plant Biomechanics Group Freiburg, Botanic Garden of the University of Freiburg, Schaenzlestrasse 1, 79104 Freiburg i. Br., Germany
- University of Freiburg, FMF-Freiburg Materials Research Center, Stefan-Meier-Straße 21, 79104 Freiburg i. Br., Germany
| | - Uwe Schaumann
- E.G.O. Elektro-Gerätebau GmbH, Blanc-und-Fischer-Platz 1-3, 75038 Oberderdingen, Germany
| | - Tim Kampowski
- University of Freiburg, Plant Biomechanics Group Freiburg, Botanic Garden of the University of Freiburg, Schaenzlestrasse 1, 79104 Freiburg i. Br., Germany
- University of Freiburg, FMF-Freiburg Materials Research Center, Stefan-Meier-Straße 21, 79104 Freiburg i. Br., Germany
| | - Kim Ulrich
- University of Freiburg, Plant Biomechanics Group Freiburg, Botanic Garden of the University of Freiburg, Schaenzlestrasse 1, 79104 Freiburg i. Br., Germany
- University of Freiburg, FMF-Freiburg Materials Research Center, Stefan-Meier-Straße 21, 79104 Freiburg i. Br., Germany
- University of Freiburg, Cluster of Excellence livMatS @ FIT-Freiburg Center for Interactive Materials and Bioinspired Technologies, Georges-Koehler-Allee 105, 79110 Freiburg i. Br., Germany
| | - Marc Thielen
- University of Freiburg, Plant Biomechanics Group Freiburg, Botanic Garden of the University of Freiburg, Schaenzlestrasse 1, 79104 Freiburg i. Br., Germany
- University of Freiburg, FMF-Freiburg Materials Research Center, Stefan-Meier-Straße 21, 79104 Freiburg i. Br., Germany
| | - Georg Bold
- University of Freiburg, Plant Biomechanics Group Freiburg, Botanic Garden of the University of Freiburg, Schaenzlestrasse 1, 79104 Freiburg i. Br., Germany
- University of Freiburg, FMF-Freiburg Materials Research Center, Stefan-Meier-Straße 21, 79104 Freiburg i. Br., Germany
| | - Thomas Speck
- University of Freiburg, Plant Biomechanics Group Freiburg, Botanic Garden of the University of Freiburg, Schaenzlestrasse 1, 79104 Freiburg i. Br., Germany
- University of Freiburg, FMF-Freiburg Materials Research Center, Stefan-Meier-Straße 21, 79104 Freiburg i. Br., Germany
- University of Freiburg, Cluster of Excellence livMatS @ FIT-Freiburg Center for Interactive Materials and Bioinspired Technologies, Georges-Koehler-Allee 105, 79110 Freiburg i. Br., Germany
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D’Accolti M, Soffritti I, Bini F, Mazziga E, Mazzacane S, Caselli E. Pathogen Control in the Built Environment: A Probiotic-Based System as a Remedy for the Spread of Antibiotic Resistance. Microorganisms 2022; 10:microorganisms10020225. [PMID: 35208679 PMCID: PMC8876034 DOI: 10.3390/microorganisms10020225] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2021] [Revised: 01/18/2022] [Accepted: 01/19/2022] [Indexed: 02/05/2023] Open
Abstract
The high and sometimes inappropriate use of disinfectants and antibiotics has led to alarming levels of Antimicrobial Resistance (AMR) and to high water and hearth pollution, which today represent major threats for public health. Furthermore, the current SARS-CoV-2 pandemic has deeply influenced our sanitization habits, imposing the massive use of chemical disinfectants potentially exacerbating both concerns. Moreover, super-sanitation can profoundly influence the environmental microbiome, potentially resulting counterproductive when trying to stably eliminate pathogens. Instead, environmentally friendly procedures based on microbiome balance principles, similar to what applied to living organisms, may be more effective, and probiotic-based eco-friendly sanitation has been consistently reported to provide stable reduction of both pathogens and AMR in treated-environments, compared to chemical disinfectants. Here, we summarize the results of the studies performed in healthcare settings, suggesting that such an approach may be applied successfully also to non-healthcare environments, including the domestic ones, based on its effectiveness, safety, and negligible environmental impact.
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Affiliation(s)
- Maria D’Accolti
- Department of Chemical, Pharmaceutical and Agricultural Sciences and LTTA, University of Ferrara, 44121 Ferrara, Italy; (M.D.); (I.S.); (F.B.); (E.M.)
- CIAS Research Center, University of Ferrara, Via Saragat 13, 44122 Ferrara, Italy;
| | - Irene Soffritti
- Department of Chemical, Pharmaceutical and Agricultural Sciences and LTTA, University of Ferrara, 44121 Ferrara, Italy; (M.D.); (I.S.); (F.B.); (E.M.)
- CIAS Research Center, University of Ferrara, Via Saragat 13, 44122 Ferrara, Italy;
| | - Francesca Bini
- Department of Chemical, Pharmaceutical and Agricultural Sciences and LTTA, University of Ferrara, 44121 Ferrara, Italy; (M.D.); (I.S.); (F.B.); (E.M.)
| | - Eleonora Mazziga
- Department of Chemical, Pharmaceutical and Agricultural Sciences and LTTA, University of Ferrara, 44121 Ferrara, Italy; (M.D.); (I.S.); (F.B.); (E.M.)
| | - Sante Mazzacane
- CIAS Research Center, University of Ferrara, Via Saragat 13, 44122 Ferrara, Italy;
| | - Elisabetta Caselli
- Department of Chemical, Pharmaceutical and Agricultural Sciences and LTTA, University of Ferrara, 44121 Ferrara, Italy; (M.D.); (I.S.); (F.B.); (E.M.)
- CIAS Research Center, University of Ferrara, Via Saragat 13, 44122 Ferrara, Italy;
- Correspondence:
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Tavčer PF, Brenčič K, Fink R, Tomšič B. Influence of Hydrogen Peroxide on Disinfection and Soil Removal during Low-Temperature Household Laundry. Molecules 2021; 27:molecules27010195. [PMID: 35011427 PMCID: PMC8746306 DOI: 10.3390/molecules27010195] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2021] [Revised: 12/23/2021] [Accepted: 12/27/2021] [Indexed: 12/04/2022] Open
Abstract
In the Water, Energy and Waste Directive, the European Commission provides for the use of household washing programmes with lower temperatures (30–40 °C) and lower water consumption. However, low washing temperatures and the absence of oxidising agents in the liquid detergents, and their reduced content in powder detergents, allow biofilm formation in washing machines and the development of an unpleasant odour, while the washed laundry can become a carrier of pathogenic bacteria, posing a risk to human health. The aim of the study was to determine whether the addition of hydrogen peroxide (HP) to liquid detergents in low-temperature household washing allows disinfection of the laundry without affecting the properties of the washed textiles even after several consecutive washes. Fabrics of different colours and of different raw material compositions were repeatedly washed in a household washing machine using a liquid detergent with the addition of 3% stabilised HP solution in the main wash, prewash or rinse. The results of the antimicrobial activity, soil removal activity, colour change and tensile strength confirmed the excellent disinfection activity of the 3% HP, but only if added in the main wash. Its presence did not discolour nor affect the tensile strength of the laundry, thus maintaining its overall appearance.
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Affiliation(s)
- Petra Forte Tavčer
- Faculty of Natural Sciences and Engineering, University of Ljubljana, Aškerčeva 12, 1000 Ljubljana, Slovenia; (K.B.); (B.T.)
- Correspondence:
| | - Katja Brenčič
- Faculty of Natural Sciences and Engineering, University of Ljubljana, Aškerčeva 12, 1000 Ljubljana, Slovenia; (K.B.); (B.T.)
| | - Rok Fink
- Faculty of Health Sciences, University of Ljubljana, Zdravstvena pot 5, 1000 Ljubljana, Slovenia;
| | - Brigita Tomšič
- Faculty of Natural Sciences and Engineering, University of Ljubljana, Aškerčeva 12, 1000 Ljubljana, Slovenia; (K.B.); (B.T.)
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Metatranscriptomic Analysis of Bacterial Communities on Laundered Textiles: A Pilot Case Study. Microorganisms 2021; 9:microorganisms9081591. [PMID: 34442670 PMCID: PMC8400938 DOI: 10.3390/microorganisms9081591] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2021] [Revised: 07/21/2021] [Accepted: 07/22/2021] [Indexed: 12/13/2022] Open
Abstract
Microbially contaminated washing machines and mild laundering conditions facilitate the survival and growth of microorganisms on laundry, promoting undesired side effects such as malodor formation. Clearly, a deeper understanding of the functionality and hygienic relevance of the laundry microbiota necessitates the analysis of the microbial gene expression on textiles after washing, which—to the best of our knowledge—has not been performed before. In this pilot case study, we used single-end RNA sequencing to generate de novo transcriptomes of the bacterial communities remaining on polyester and cotton fabrics washed in a domestic washing machine in mild conditions and subsequently incubated under moist conditions for 72 h. Two common de novo transcriptome assemblers were used. The final assemblies included 22,321 Trinity isoforms and 12,600 Spades isoforms. A large part of these isoforms could be assigned to the SwissProt database, and was further categorized into “molecular function”, “biological process” and “cellular component” using Gene Ontology (GO) terms. In addition, differential gene expression was used to show the difference in the pairwise comparison of the two tissue types. When comparing the assemblies generated with the two assemblers, the annotation results were relatively similar. However, there were clear differences between the de novo assemblies regarding differential gene expression.
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