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Characterization, genome analysis and genetic tractability studies of a new nanocellulose producing Komagataeibacter intermedius isolate. Sci Rep 2022; 12:20520. [PMID: 36443480 PMCID: PMC9705422 DOI: 10.1038/s41598-022-24735-z] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2022] [Accepted: 11/18/2022] [Indexed: 11/29/2022] Open
Abstract
Bacterial nanocellulose (BC) is a highly versatile biopolymer currently pursued as a material of choice in varied themes of biomedical and material science research fields. With the aim to extend the biotechnological applications, the genetic tractability of the BC producers within the Komagataeibacter genus and its potential as an alternative host chassis in synthetic biology have been extensively studied. However, such studies have been largely focused on the model Komagataeibacter spp. Here, we present a novel K. intermedius strain capable of utilizing glucose, and glycerol sources for biomass and BC synthesis. Genome assembly identified one bacterial cellulose synthetase (bcs) operon containing the complete gene set encoding the BC biogenesis machinery (bcsI) and three additional copies (bcsII-IV). Investigations on the genetic tractability confirmed plasmid transformation, propagation of vectors with pBBR1 and p15A origin of replications and constitutive and inducible induction of recombinant protein in K. intermedius ENS15. This study provides the first report on the genetic tractability of K. intermedius, serving as starting point towards future genetic engineering of this strain.
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Ochoa-Sánchez M, Cerqueda-García D, Moya A, Ibarra-Laclette E, Altúzar-Molina A, Desgarennes D, Aluja M. Bitter friends are not always toxic: The loss of acetic acid bacteria and the absence of Komagataeibacter in the gut microbiota of the polyphagous fly Anastrepha ludens could inhibit its development in Psidium guajava in contrast to A. striata and A. fraterculus that flourish in this host. Front Microbiol 2022; 13:979817. [PMID: 36246214 PMCID: PMC9554433 DOI: 10.3389/fmicb.2022.979817] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2022] [Accepted: 08/29/2022] [Indexed: 11/13/2022] Open
Abstract
The gut microbiota is key for the homeostasis of many phytophagous insects, but there are few studies comparing its role on host use by stenophagous or polyphagous frugivores. Guava (Psidium guajava) is a fruit infested in nature by the tephritids Anastrepha striata and A. fraterculus. In contrast, the extremely polyphagous A. ludens infests guava only under artificial conditions, but unlike A. striata and the Mexican A. fraterculus, it infests bitter oranges (Citrus x aurantium). We used these models to analyze whether the gut microbiota could explain the differences in host use observed in these flies. We compared the gut microbiota of the larvae of the three species when they developed in guava and the microbiota of the fruit pulp larvae fed on. We also compared the gut microbiota of A. ludens developing in C. x aurantium with the pulp microbiota of this widely used host. The three flies modified the composition of the host pulp microbiota (i.e., pulp the larvae fed on). We observed a depletion of Acetic Acid Bacteria (AAB) associated with a deleterious phenotype in A. ludens when infesting P. guajava. In contrast, the ability of A. striata and A. fraterculus to infest this fruit is likely associated to a symbiotic interaction with species of the Komagataeibacter genus, which are known to degrade a wide spectrum of tannins and polyphenols. The three flies establish genera specific symbiotic associations with AABs. In the case of A. ludens, the association is with Gluconobacter and Acetobacter, but importantly, it cannot be colonized by Komagataeibacter, a factor likely inhibiting its development in guava.
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Affiliation(s)
- Manuel Ochoa-Sánchez
- Red de Manejo Biorracional de Plagas y Vectores, Clúster Científico y Tecnológico Biomimic, Instituto de Ecología, A.C., Xalapa, Mexico
| | - Daniel Cerqueda-García
- Red de Manejo Biorracional de Plagas y Vectores, Clúster Científico y Tecnológico Biomimic, Instituto de Ecología, A.C., Xalapa, Mexico
- *Correspondence: Daniel Cerqueda-García,
| | - Andrés Moya
- Instituto de Biología Integrativa de Sistemas (I2SysBio), Universidad de Valencia and Consejo Superior de Investigaciones Científicas (CSIC), Valencia, Spain
- Fundación para el Fomento de la Investigación Sanitaria y Biomédica de la Comunidad Valenciana (FISABIO), Valencia, Spain
| | - Enrique Ibarra-Laclette
- Red de Estudios Moleculares Avanzados, Clúster Científico y Tecnológico Biomimic, Instituto de Ecología, A.C., Xalapa, Mexico
| | - Alma Altúzar-Molina
- Red de Manejo Biorracional de Plagas y Vectores, Clúster Científico y Tecnológico Biomimic, Instituto de Ecología, A.C., Xalapa, Mexico
| | - Damaris Desgarennes
- Red de Biodiversidad y Sistemática, Clúster Científico y Tecnológico Biomimic, Instituto de Ecología, A.C., Xalapa, Mexico
| | - Martín Aluja
- Red de Manejo Biorracional de Plagas y Vectores, Clúster Científico y Tecnológico Biomimic, Instituto de Ecología, A.C., Xalapa, Mexico
- Martín Aluja,
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