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Kim T, Kim J. Color-Tunable Indolizine-Based Fluorophores and Fluorescent pH Sensor. Molecules 2021; 27:12. [PMID: 35011241 PMCID: PMC8746752 DOI: 10.3390/molecules27010012] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2021] [Revised: 12/17/2021] [Accepted: 12/20/2021] [Indexed: 12/03/2022] Open
Abstract
A new fluorescent indolizine-based scaffold was developed using a straightforward synthetic scheme starting from a pyrrole ring. In this fluorescent system, an N,N-dimethylamino group in the aryl ring at the C-3 position of indolizine acted as an electron donor and played a crucial role in inducing a red shift in the emission wavelength based on the ICT process. Moreover, various electron-withdrawing groups, such as acetyl and aldehyde, were introduced at the C-7 position of indolizine, to tune and promote the red shift of the emission wavelength, resulting in a color range from blue to orange (462-580 nm). Furthermore, the ICT effect in indolizine fluorophores allowed the design and development of new fluorescent pH sensors of great potential in the field of fluorescence bioimaging and sensors.
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Affiliation(s)
- Taegwan Kim
- Department of Chemistry, Soongsil University, Seoul 06978, Korea;
| | - Jonghoon Kim
- Department of Chemistry, Soongsil University, Seoul 06978, Korea;
- Integrative Institute of Basic Science, Soongsil University, Seoul 06978, Korea
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2
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Jung Y, Hong JE, Kwak JH, Park Y. Single-Step Approach toward Nitrones via Pyridinium Ylides: The DMAP-Catalyzed Reaction of Benzyl Halides with Nitrosoarenes. J Org Chem 2021; 86:6343-6350. [PMID: 33890771 DOI: 10.1021/acs.joc.1c00158] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
A single-step approach is reported for the preparation of nitrones from benzyl halides and nitrosoarenes via pyridinium ylides, utilizing 4-dimethylaminopyridine (DMAP) catalyst and mild reaction conditions (Li2CO3, dimethylacetamide, and room temperature). The reaction provides both keto- and aldonitrones in high yields with a wide scope for benzyl halides and nitrosoarenes. In the same reaction system, 2-methyl-2-nitrosopropane, which does not have an aryl group, also affords the corresponding N-tert-butyl nitrones from primary benzyl bromides that have an electron-withdrawing group. As an application of the reaction, methyl 2-bromo-2-phenylacetate was used to prepare the corresponding isoxazolidine by a sequential one-pot synthesis.
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Affiliation(s)
- Yeonghun Jung
- College of Pharmacy, Inje Institute of Pharmaceutical Sciences and Research, Inje University, 197 Inje-ro, Gimhae, Gyeongnam 50834, Republic of Korea
| | - Jee Eun Hong
- College of Pharmacy, Inje Institute of Pharmaceutical Sciences and Research, Inje University, 197 Inje-ro, Gimhae, Gyeongnam 50834, Republic of Korea
| | - Jae-Hwan Kwak
- College of Pharmacy, Kyungsung University, 309 Suyeong-ro, Nam-gu, Busan 48434, Republic of Korea
| | - Yohan Park
- College of Pharmacy, Inje Institute of Pharmaceutical Sciences and Research, Inje University, 197 Inje-ro, Gimhae, Gyeongnam 50834, Republic of Korea
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3
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Zhang H, Wang M, Wu X, Zhu C. Heterocyclization Reagents for Rapid Assembly of N‐Fused Heteroarenes from Alkenes. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202013089] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Huihui Zhang
- Key Laboratory of Organic Synthesis of Jiangsu Province College of Chemistry, Chemical Engineering and Materials Science Soochow University 199 Ren-Ai Road Suzhou Jiangsu 215123 China
| | - Min Wang
- Key Laboratory of Organic Synthesis of Jiangsu Province College of Chemistry, Chemical Engineering and Materials Science Soochow University 199 Ren-Ai Road Suzhou Jiangsu 215123 China
| | - Xinxin Wu
- Key Laboratory of Organic Synthesis of Jiangsu Province College of Chemistry, Chemical Engineering and Materials Science Soochow University 199 Ren-Ai Road Suzhou Jiangsu 215123 China
| | - Chen Zhu
- Key Laboratory of Organic Synthesis of Jiangsu Province College of Chemistry, Chemical Engineering and Materials Science Soochow University 199 Ren-Ai Road Suzhou Jiangsu 215123 China
- Key Laboratory of Synthetic Chemistry of Natural Substances Shanghai Institute of Organic Chemistry Chinese Academy of Sciences 345 Lingling Road Shanghai 200032 China
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4
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Zhang H, Wang M, Wu X, Zhu C. Heterocyclization Reagents for Rapid Assembly of N-Fused Heteroarenes from Alkenes. Angew Chem Int Ed Engl 2020; 60:3714-3719. [PMID: 33140527 DOI: 10.1002/anie.202013089] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2020] [Indexed: 12/17/2022]
Abstract
N-Fused heterocycles are of particular use and upmost importance in multiple fields. Herein, we disclose a conceptually new approach for the rapid assembly of N-fused heteroarenes from alkenes. A portfolio of strategically designed heterocyclization reagents are readily prepared for the cascade reaction. A plethora of N-fused heteroarenes including seven types of heterocyclic core are furnished. The protocol features a broad functional-group compatibility and high product diversity, and provides a practical tool for late-stage heteroarene elaboration.
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Affiliation(s)
- Huihui Zhang
- Key Laboratory of Organic Synthesis of Jiangsu Province, College of Chemistry, Chemical Engineering and Materials Science, Soochow University, 199 Ren-Ai Road, Suzhou, Jiangsu, 215123, China
| | - Min Wang
- Key Laboratory of Organic Synthesis of Jiangsu Province, College of Chemistry, Chemical Engineering and Materials Science, Soochow University, 199 Ren-Ai Road, Suzhou, Jiangsu, 215123, China
| | - Xinxin Wu
- Key Laboratory of Organic Synthesis of Jiangsu Province, College of Chemistry, Chemical Engineering and Materials Science, Soochow University, 199 Ren-Ai Road, Suzhou, Jiangsu, 215123, China
| | - Chen Zhu
- Key Laboratory of Organic Synthesis of Jiangsu Province, College of Chemistry, Chemical Engineering and Materials Science, Soochow University, 199 Ren-Ai Road, Suzhou, Jiangsu, 215123, China.,Key Laboratory of Synthetic Chemistry of Natural Substances, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, 345 Lingling Road, Shanghai, 200032, China
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5
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Jung Y, Hong JE, Baek ST, Hong S, Kwak JH, Park Y. 4-Dimethylaminopyridine-Catalyzed Metal-Free Aerobic Oxidation of Aryl α-Halo Esters to Aryl α-Keto Esters. ACS OMEGA 2020; 5:22951-22957. [PMID: 32954144 PMCID: PMC7495759 DOI: 10.1021/acsomega.0c02511] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/28/2020] [Accepted: 08/21/2020] [Indexed: 06/11/2023]
Abstract
A novel, metal-free aerobic oxidation method is described. 4-Dimethylaminopyridine (DMAP) successfully catalyzed the oxidation of aryl α-halo esters to corresponding aryl α-keto esters (up to 95% yield) under mild reaction conditions (Li2CO3, dimethylacetamide, air, and room temperature). A mechanism has been proposed where the oxidation proceeds through a [3 + 2] cycloaddition between O2 in an air atmosphere and pyridinium ylides. The ylides are supposedly generated from aryl α-halo esters and DMAP in the presence of carbonates. Based on the plausible mechanism, the potential of DMAP as a catalyst in oxidation reactions was extended.
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Affiliation(s)
- Yeonghun Jung
- College
of Pharmacy, Inje Institute of Pharmaceutical Sciences and Research, Inje University, 197 Inje-ro, Gimhae, Gyeongnam 50834, Republic of Korea
| | - Jee Eun Hong
- College
of Pharmacy, Inje Institute of Pharmaceutical Sciences and Research, Inje University, 197 Inje-ro, Gimhae, Gyeongnam 50834, Republic of Korea
| | - Seung Tae Baek
- College
of Pharmacy, Inje Institute of Pharmaceutical Sciences and Research, Inje University, 197 Inje-ro, Gimhae, Gyeongnam 50834, Republic of Korea
| | - Suckchang Hong
- College
of Pharmacy, Research Institute of Pharmaceutical Sciences, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul 08826, Republic
of Korea
| | - Jae-Hwan Kwak
- College
of Pharmacy, Brain Busan 21 Plus Program, 309 Suyeong-ro,
Nam-gu, Kyungsung University, Busan 48434, Korea
| | - Yohan Park
- College
of Pharmacy, Inje Institute of Pharmaceutical Sciences and Research, Inje University, 197 Inje-ro, Gimhae, Gyeongnam 50834, Republic of Korea
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6
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Sokolova EA, Festa AA, Subramani K, Rybakov VB, Varlamov AV, Voskressensky LG, Van der Eycken EV. Microwave-Assisted Synthesis of Fluorescent Pyrido[2,3- b]indolizines from Alkylpyridinium Salts and Enaminones. Molecules 2020; 25:E4059. [PMID: 32899473 PMCID: PMC7570714 DOI: 10.3390/molecules25184059] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2020] [Revised: 08/24/2020] [Accepted: 09/03/2020] [Indexed: 11/17/2022] Open
Abstract
Pyridinium ylides are well recognized as dipoles for cycloaddition reactions. In its turn, the microwave-assisted interaction of N-(cyanomethyl)-2-alkylpyridinium salts with enaminones unexpectedly proceeds as a domino sequence of cycloisomerization and cyclocondensation reactions, instead of a 1,3-dipolar cycloaddition. The reaction takes place in the presence of sodium acetate as base and employs benign solvents. The optical properties of the resulting pyrido[2,3-b]indolizines were studied, showing green light emission with high fluorescence quantum yields.
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Affiliation(s)
- Ekaterina A. Sokolova
- Organic Chemistry Department, Science Faculty, RUDN University, Miklukho-Maklaya st., 6, 117198 Moscow, Russia; (E.A.S.); (A.A.F.); (K.S.); (A.V.V.); (L.G.V.)
| | - Alexey A. Festa
- Organic Chemistry Department, Science Faculty, RUDN University, Miklukho-Maklaya st., 6, 117198 Moscow, Russia; (E.A.S.); (A.A.F.); (K.S.); (A.V.V.); (L.G.V.)
| | - Karthikeyan Subramani
- Organic Chemistry Department, Science Faculty, RUDN University, Miklukho-Maklaya st., 6, 117198 Moscow, Russia; (E.A.S.); (A.A.F.); (K.S.); (A.V.V.); (L.G.V.)
| | - Victor B. Rybakov
- Department of Chemistry, Lomonosov Moscow State University, Leninskie Gory, 1–3, 119991 Moscow, Russia;
| | - Alexey V. Varlamov
- Organic Chemistry Department, Science Faculty, RUDN University, Miklukho-Maklaya st., 6, 117198 Moscow, Russia; (E.A.S.); (A.A.F.); (K.S.); (A.V.V.); (L.G.V.)
| | - Leonid G. Voskressensky
- Organic Chemistry Department, Science Faculty, RUDN University, Miklukho-Maklaya st., 6, 117198 Moscow, Russia; (E.A.S.); (A.A.F.); (K.S.); (A.V.V.); (L.G.V.)
| | - Erik V. Van der Eycken
- Organic Chemistry Department, Science Faculty, RUDN University, Miklukho-Maklaya st., 6, 117198 Moscow, Russia; (E.A.S.); (A.A.F.); (K.S.); (A.V.V.); (L.G.V.)
- Laboratory for Organic & Microwave-Assisted Chemistry (LOMAC), Department of Chemistry, University of Leuven (KU Leuven), Celestijnenlaan 200F, B-3001 Leuven, Belgium
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7
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Computational and Spectral Means for Characterizing the Intermolecular Interactions in Solutions and for Estimating Excited State Dipole Moment of Solute. Symmetry (Basel) 2020. [DOI: 10.3390/sym12081299] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023] Open
Abstract
The results obtained both in quantum chemical computation and in solvatochromic study of pyridinium di-carbethoxy methylid (PCCM) are correlated in order to estimate the electric dipole moment in the excited state of this molecule. This estimation is made by a variational method in the hypothesis that the molecular polarizability does not change in time of the absorption process. Ternary solutions of PCCM in protic binary solvents are used here, both establishing the contribution of each type of interaction to the spectral shift and to characterize the composition of the first solvation shell of PCCM. Results are compared with those obtained before for other binary solvents. The difference between the interaction energies in molecular pairs of PCCM-active solvent and PCCM-less active solvent was also estimated based on the cell statistical model of the ternary solutions.
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8
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Pal KB, Mahanti M, Huang X, Persson S, Sundin AP, Zetterberg FR, Oredsson S, Leffler H, Nilsson UJ. Quinoline-galactose hybrids bind selectively with high affinity to a galectin-8 N-terminal domain. Org Biomol Chem 2019; 16:6295-6305. [PMID: 30117507 DOI: 10.1039/c8ob01354c] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Abstract
Quinolines, indolizines, and coumarins are well known structural elements in many biologically active molecules. In this report, we have developed straightforward methods to incorporate quinoline, indolizine, and coumarin structures into galactoside derivatives under robust reaction conditions for the discovery of glycomimetic inhibitors of the galectin family of proteins that are involved in immunological and tumor-promoting biological processes. Evaluation of the quinoline, indolizine and coumarin-derivatised galactosides as inhibitors of the human galectin-1, 2, 3, 4N (N-terminal domain), 4C (C-terminal domain), 7, 8N, 8C, 9N, and 9C revealed quinoline derivatives that selectively bound galectin-8N, a galectin with key roles in lymphangiogenesis, tumor progression, and autophagy, with up to nearly 60-fold affinity improvements relative to methyl β-d-galactopyranoside. Molecular dynamics simulations proposed an interaction mode in which Arg59 had moved 2.5 Å and in which an inhibitor carboxylate and quinoline nitrogen formed structure-stabilizing water-mediated hydrogen bonds. The compounds were demonstrated to be non-toxic in an MTT assay with several breast cancer cell lines and one normal cell line. The improved affinity, selectivity, and low cytotoxicity suggest that the quinoline-galactoside derivatives provide an attractive starting point for the development of galectin-8N inhibitors potentially interfering with pathological lymphangiogenesis, autophagy, and tumor progression.
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Affiliation(s)
- Kumar Bhaskar Pal
- Centre for Analysis and Synthesis, Department of Chemistry, Lund University, Box 124, SE-221 00, Lund, Sweden.
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9
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Sengoku T, Ikeda I, Ai K, Takahashi M, Yoda H. Indium- and zinc-catalyzed enantioselective amide propargylation of aldehydes with stannylated allenyl amides. Org Biomol Chem 2019; 17:2614-2618. [PMID: 30762059 DOI: 10.1039/c9ob00040b] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
The catalytic enantioselective propargylation of aldehydes with newly prepared stannyl allenyl amides is described. The reaction has been accomplished by using catalytic amounts of indium chloride, zinc chloride, and a chiral BINOL derivative, affording amide-functionalized homopropargyl alcohols in excellent yields and enantioselectivities.
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Affiliation(s)
- Tetsuya Sengoku
- Department of Applied Chemistry, Faculty of Engineering, Shizuoka University, 3-5-1 Johoku, Naka-ku, Hamamatsu 432-8561, Japan.
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10
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Dohmen C, Ihmels H, Kreienmeier R, Patrick BO. Synthesis of a crystallochromic indolizine dye by a base- and catalyst-free photochemical route. Chem Commun (Camb) 2019; 55:11071-11074. [DOI: 10.1039/c9cc04730a] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
Abstract
Irradiation of 2-benzoyl-N-benzylpyridinium derivatives and dimethyl acetylene dicarboxylate resulted in the formation of inolizine derivatives, one which was found to be the first example of a crystallochromic indolizine.
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Affiliation(s)
- Christoph Dohmen
- Department Chemie-Biologie
- Organische Chemie II, Universität Siegen
- 57068 Siegen
- Germany
| | - Heiko Ihmels
- Department Chemie-Biologie
- Organische Chemie II, Universität Siegen
- 57068 Siegen
- Germany
| | - Rouven Kreienmeier
- Department Chemie-Biologie
- Organische Chemie II, Universität Siegen
- 57068 Siegen
- Germany
| | - Brian O. Patrick
- Department of Chemistry, Structural Chemistry Facility
- The University of British Columbia
- Vancouver
- Canada
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11
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Arvin-Berod M, Desroches-Castan A, Bonte S, Brugière S, Couté Y, Guyon L, Feige JJ, Baussanne I, Demeunynck M. Indolizine-Based Scaffolds as Efficient and Versatile Tools: Application to the Synthesis of Biotin-Tagged Antiangiogenic Drugs. ACS OMEGA 2017; 2:9221-9230. [PMID: 30023604 PMCID: PMC6044919 DOI: 10.1021/acsomega.7b01184] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/18/2017] [Accepted: 11/28/2017] [Indexed: 06/08/2023]
Abstract
We describe the design and optimization of polyfunctional scaffolds based on a fluorescent indolizine core derivatized with various orthogonal groups (amines, esters, oximes, alkynes, etc.). To show one application as tools in biology, the scaffold was used to prepare drug-biotin conjugates that were then immobilized onto avidin-agarose for affinity chromatography. More specifically, the antiangiogenic drug COB223, whose mechanism of action remained unclear, was chosen as a proof-of-concept drug. The drug-selective discrimination of proteins observed after elution of the cell lysates through the affinity columns, functionalized either with the biologically active COB223 or a structurally related inactive analogue (COB236), is a clear indication that the presence of the indolizine core does not limit drug-protein interaction and confirms the usefulness of the indolizine scaffold. Furthermore, the separation of COB223-interacting proteins from human placental extracts unveiled unanticipated protein targets belonging to the family of regulatory RNA-binding proteins, which opens the way to new hypotheses on the mode of action of this antiangiogenic drug.
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Affiliation(s)
| | | | - Simon Bonte
- Univ.
Grenoble Alpes, CNRS, DPM, 38000 Grenoble, France
| | - Sabine Brugière
- Univ.
Grenoble Alpes, CEA, Inserm, BIG-BGE, 38000 Grenoble, France
| | - Yohann Couté
- Univ.
Grenoble Alpes, CEA, Inserm, BIG-BGE, 38000 Grenoble, France
| | - Laurent Guyon
- Univ.
Grenoble Alpes, Inserm, CEA, BIG-BCI, 38000, Grenoble, France
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12
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Synthesis of pyridinium ylides and simulation of their 1,3-dipolar cycloaddition mechanism. MENDELEEV COMMUNICATIONS 2017. [DOI: 10.1016/j.mencom.2017.09.025] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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