Phytochemical Screening of Quaking Aspen (Populus tremuloides) Extracts by UPLC-QTOF-MS and Evaluation of their Antimicrobial Activity

Editing Metabolism, Sex, and Microbiome: How Can We Help Poplar Resist Pathogens?

Poplar (Populus) is a genus of woody plants of great economic value. Due to the growing economic importance of poplar, there is a need to ensure its stable growth by increasing its resistance to pathogens. Genetic engineering can create organisms with improved traits faster than traditional methods, and with the development of CRISPR/Cas-based genome editing systems, scientists have a new highly effective tool for creating valuable genotypes. In this review, we summarize the latest research data on poplar diseases, the biology of their pathogens and how these plants resist pathogens. In the final section, we propose to plant male or mixed poplar populations; consider the genes of the MLO group, transcription factors of the WRKY and MYB families and defensive proteins BbChit1, LJAMP2, MsrA2 and PtDef as the most promising targets for genetic engineering; and also pay attention to the possibility of microbiome engineering.

Drug discovery inspired by bioactive small molecules from nature

Natural products (NPs) have greatly contributed to the development of novel treatments for human diseases such as cancer, metabolic disorders, and infections. Compared to synthetic chemical compounds, primary and secondary metabolites from medicinal plants, fungi, microorganisms, and our bodies are promising resources with immense chemical diversity and favorable properties for drug development. In addition to the well-validated significance of secondary metabolites, endogenous small molecules derived from central metabolism and signaling events have shown great potential as drug candidates due to their unique metabolite-protein interactions. In this short review, we highlight the values of NPs, discuss recent scientific and technological advances including metabolomics tools, chemoproteomics approaches, and artificial intelligence-based computation platforms, and explore potential strategies to overcome the current challenges in NP-driven drug discovery.

Evaluation of Factors Affecting Tree and Shrub Bark's Antioxidant Status

The importance of using the barks of trees and shrubs as powerful natural antioxidants suggests the necessity to evaluate the effect of different environmental factors on bark extracts’ quality. The determination of total antioxidant activity (AOA) and polyphenol content (TP) in the bark of 58 tree and shrub species from 7 regions differing in mean annual temperature, insolation, humidity, salinity level, and altitude was performed. The above stress factors positively affected bark AOA but did not have a statistically significant effect on TP. The bark of trees grown in the seashore proximity was characterized by significantly higher AOA than samples gathered in other areas, similarly to the trees grown at high altitude. The bark antioxidant status of 18 species was described for the first time. New sources of powerful antioxidants were represented by the ornamental shrubs Cornus sanguinea and Cornus alba, which showed the highest AOA (169−171 mg GAE g−1 d.w.). Among the typical halophytes, Calligonum and Tamarix had high AOA (172 and 85 mg GAE g−1 d.w.), while in the bark of tamarisk, an Se accumulator, an Se concentration of about 900 µg kg−1 d.w. was recorded. A significant positive correlation was found between leaves and bark AOA in the Karadag Nature Reserve’s deciduous trees (r = 0.898, p < 0.01). The relationship between bark AOA and TP was highly significant (r = 0.809; p < 0.001) for all samples except the mountainous ones. The results of the present research revealed new opportunities in successive bark utilization.

Compensatory phenolic induction dynamics in aspen after aphid infestation

Condensed tannins (CTs) are polyphenolics and part of the total phenolic (TP) pool that shape resistance in aspen (Populus tremula). CTs are negatively associated with pathogens, but their resistance properties against herbivores are less understood. CTs shape resistance to pathogens and chewing herbivores and could also shape resistance to aphids. Being chemical pools that are highly variable it can further be questioned whether CT-shaped resistance is better described by constitutive levels, by the induced response potential, or by both. Here, aspen genotypes were propagated and selected to represent a range of inherent abilities to produce and store foliar CTs; the plantlets were then exposed to Chaitophorus aphid infestation and to mechanical (leaf rupture) damage, and the relative abundance of constitutive and induced CTs was related to aphid fitness parameters. As expected, aphid fecundity was negatively related to CT-concentrations of the aphid infested plants although more consistently related to TPs. While TPs increased in response to damage, CT induction was generally low and it even dropped below constitutive levels in more CT-rich genotypes, suggesting that constitutive CTs are more relevant measurements of resistance compared to induced CT-levels. Relating CT and TP dynamics with phenolic low molecular compounds further suggested that catechin (the building block of CTs) increased in response to aphid damage in amounts that correlated negatively with CT-induction and positively with constitutive CT-levels and aphid fecundity. Our study portrays dynamic phenolic responses to two kinds of damage detailed for major phenylpropanoid classes and suggests that the ability of a genotype to produce and store CTs may be a measurement of resistance, caused by other, more reactive, phenolic compounds such as catechin. Rupture damage however appeared to induce catechin levels oppositely supporting that CTs may respond differently to different kinds of damage.

Microwave-Assisted Water Extraction of Aspen (Populus tremula) and Pine (Pinus sylvestris L.) Barks as a Tool for Their Valorization

The barks of aspen (Populus tremula) and pine (Pinus sylvestris) are byproducts of wood processing, characterized by their low economic value. In the present study, microwave-assisted one-cycle water extraction was explored as a tool for the valorization of this biomass as a source of biologically active compounds. The microwave extractor of the original construction equipped with a pressurized extraction chamber and a condenser section was used. The microwave-assisted extraction (MAE), specially including dynamic dielectric heating up to 70 °C followed by 30 min of isothermal heating, promoted the isolation of salicin from aspen bark, allowing for the obtention of a two-times-higher free salicin concentration in water extracts (−14% vs. 7%) reached by multi-cycle accelerated solvent extraction (ASE), which is an advanced technique used as a reference. The MAE of pine bark with dynamic heating up to 90–130 °C, avoiding the isothermal heating step, allowed for the obtention of a 1.7-times-higher concentration of proantocyanidin dimers-tetramers, a 1.3-times-higher concentration of catechin and a 1.2-times-higher concentration of quinic acid in water extracts in comparison to a more time- and solvent-consuming ASE performed at the same temperature. The biological activity of the obtained extracts was characterized in terms of their ability to inhibit xahntine oxidase enzyme, which is a validated target for the therapeutic treatment of hyperuricemia.

Kaempferol: A flavonoid with wider biological activities and its applications

Kaempferol and its derivatives are naturally occurring phytochemicals with promising bioactivities. This flavonol can reduce the lipid oxidation in the human body, prevent the organs and cell structure from deterioration and protect their functional integrity. This review has extensively highlighted the antioxidant, antimicrobial, anticancer, neuroprotective, and hepatoprotective activity of kaempferol. However, poor water solubility and low bioavailability of kaempferol greatly limit its applications. The utilization of advanced delivery systems can improve its stability, efficacy, and bioavailability. This is the first review that aimed to comprehensively collate some of the vital information published on biosynthesis, mechanism of action, bioactivities, bioavailability, and toxicological potential of kaempferol. Besides, it provides insights into the future direction on the improvement of bioavailability of kaempferol for wide applications.

Gender discrimination of Populus tomentosa barks by HPLC fingerprint combined with multivariate statistics

A high-performance liquid chromatography (HPLC) fingerprint method with multivariate statistical analyses was applied to discriminate the male and female barks of Populus tomentosa for the first time. The samples of 11 male and 13 female barks of mature P. tomentosa were collected in Beijing. The chemical fingerprint of methanol extract was established by HPLC method with diode array detector (DAD). The principal component analysis (PCA), hierarchical clustering analysis (HCA), and supervised orthogonal partial least squares discriminant analysis (OPLS-DA) were applied to discriminate male and female barks based on the area of common peaks identified in HPLC fingerprints. A clear grouping trend (R 2 X, 0.83; Q 2, 0.595) among the male and female samples was exhibited by PCA score plot. Two groups were clearly divided into male and female samples by HCA. Both male and female samples were well discriminated with OPLS-DA (R 2 X, 0.775; Q 2, 0.795). Seven potential chemical markers were screened by variable importance in projection (VIP values >1.0) of OPLS-DA model and four of them were identified as micranthoside, siebolside B, sakuranin, and isosakuranin. The HPLC fingerprint combined with multivariate statistical analyses could be used to discriminate the gender of barks of P. tomentosa and revealed the differences in chemical components, which enriched the basic studies on dioecious plant.

Unraveling Plant Natural Chemical Diversity for Drug Discovery Purposes

The screening and testing of extracts against a variety of pharmacological targets in order to benefit from the immense natural chemical diversity is a concern in many laboratories worldwide. And several successes have been recorded in finding new actives in natural products, some of which have become new drugs or new sources of inspiration for drugs. But in view of the vast amount of research on the subject, it is surprising that not more drug candidates were found. In our view, it is fundamental to reflect upon the approaches of such drug discovery programs and the technical processes that are used, along with their inherent difficulties and biases. Based on an extensive survey of recent publications, we discuss the origin and the variety of natural chemical diversity as well as the strategies to having the potential to embrace this diversity. It seemed to us that some of the difficulties of the area could be related with the technical approaches that are used, so the present review begins with synthetizing some of the more used discovery strategies, exemplifying some key points, in order to address some of their limitations. It appears that one of the challenges of natural product-based drug discovery programs should be an easier access to renewable sources of plant-derived products. Maximizing the use of the data together with the exploration of chemical diversity while working on reasonable supply of natural product-based entities could be a way to answer this challenge. We suggested alternative ways to access and explore part of this chemical diversity with in vitro cultures. We also reinforced how important it was organizing and making available this worldwide knowledge in an "inventory" of natural products and their sources. And finally, we focused on strategies based on synthetic biology and syntheses that allow reaching industrial scale supply. Approaches based on the opportunities lying in untapped natural plant chemical diversity are also considered.

Antimicrobial activity and chemical composition of white birch (Betula papyrifera Marshall) bark extracts

Extracts from white birch have been reported to possess antimicrobial properties, but no study has linked the chemical composition of bark extract with antimicrobial activity. This study aimed to identify white birch (Betula papyrifera Marshall) bark extracts with antimicrobial activity and elucidate its composition. In order to obtain the highest extraction yield, bark residues >3 mm were retained for extraction. A total of 10 extraction solvents were used to determine the extraction yield of each of them. Methanol and ethanol solvents extracted a greater proportion of molecules. When tested on eight microorganism species, the water extract proved to have the best antimicrobial potential followed by the methanol extract. The water extract inhibited all microorganisms at low concentration with minimal inhibitory concentration between 0.83 and 1.67 mg/ml. Using ultraperformance liquid chromatography coupled to a time-of-flight quadrupole mass spectrometer, several molecules that have already been studied for their antimicrobial properties were identified in water and methanol extracts. Catechol was identified as one of the dominant components in white birch bark water extract, and its antimicrobial activity has already been demonstrated, suggesting that catechol could be one of the main components contributing to the antimicrobial activity of this extract. Thus, extractives from forestry wastes have potential for new applications to valorize these residues.

Growth Inhibition of Phaeocystis Globosa Induced by Luteolin-7-O-glucuronide from Seagrass Enhalus acoroides

Enhalus acoroides (E. acoroides) is one of the most common species in seagrass meadows. Based on the application of allelochemicals from aquatic plants to inhibit harmful algal blooms (HABs), we used E. acoroides aqueous extract against harmful algae species Phaeocystis globosa (P. globosa). The results showed that E. acoroides aqueous extract could significantly inhibited the growth of P. globosa, decrease the chlorophyll-a content and photosynthetic efficiency (Fv/Fm) values of P. globosa, followed by vacuolization, plasmolysis, and the destruction of organelles. Twelve types of major chemical constituents were identified in E. acoroides aqueous extracts by ultraperformance liquid chromatography-high resolution mass spectrometry (UPLC-HRMS), including six flavonoids, two homocyclic peptides, two long-chain aliphatic amides, one tannin, and one nitrogen heterocyclic compound. Flavonoids were the characteristic chemical constituents of E. acoroides aqueous extract. Furthermore, the antialgal activity of luteolin-7-O-glucuronide (68.125 μg/mL in 8 g/L E. acoroides aqueous extract) was assessed. The EC_{50–96 h} value was 34.29 μg/mL. In conclusion, the results revealed that luteolin 7-O-glucuronide was one of the antialgal compounds of E. acoroides aqueous extract, with potential application as novel algaecide.